Hbet005583.1
Basic Information
- Insect
- Hydropsyche betteni
- Gene Symbol
- Bcl11b
- Assembly
- GCA_028571205.2
- Location
- JAOXNN020000030.1:297440-301676[-]
Transcription Factor Domain
- TF Family
- zf-BED
- Domain
- zf-BED domain
- PFAM
- PF02892
- TF Group
- Zinc-Coordinating Group
- Description
- The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 13 0.14 1e+04 0.6 0.2 14 27 158 171 151 183 0.84 2 13 7.1e-06 0.55 14.3 0.2 13 44 199 227 193 227 0.89 3 13 0.00012 9.2 10.3 1.7 18 44 235 258 231 258 0.93 4 13 8.8e-06 0.67 14.0 1.6 3 43 259 294 258 295 0.92 5 13 0.0074 5.6e+02 4.6 0.0 16 43 303 327 296 328 0.86 6 13 0.93 7.1e+04 -2.1 0.5 17 24 333 340 329 348 0.75 7 13 4.1e-06 0.31 15.0 1.1 13 44 398 426 392 426 0.89 8 13 0.0032 2.4e+02 5.8 3.5 12 39 440 464 429 469 0.82 9 13 1.4e-06 0.11 16.5 0.8 5 43 467 502 464 503 0.92 10 13 0.017 1.3e+03 3.4 0.3 14 38 555 576 550 582 0.84 11 13 0.81 6.1e+04 -1.9 2.8 19 44 594 613 584 613 0.72 12 13 0.31 2.3e+04 -0.6 0.5 5 23 641 659 639 667 0.82 13 13 4 3.1e+05 -5.8 9.4 12 24 764 776 726 793 0.68
Sequence Information
- Coding Sequence
- ATGGAGGGACCCCCGGGGGCCGAGGGGGCcgaggggggcgcggggggcgccgaCAGCGGGGGGGAGCGCGAGGGCGAAGTCCCCGCGCTGAAAAGGCCCCGCGAACCTTCGCTCGACGGCGTCCACTACGACGGTTACCATGAGCTGAATATGgaGACACCTCTTCAAAATGCACCAGATGTTGTTCGAAGTCGTGAAAATTCTCCGTCCACTCCGTCGTCGGTCAACGATGATGACTACAAAAATAGCGATTCGTCCGACAACACGCAAACCGACAACGCTTCGTCCGAAGACGAACGTTTAAGAAACATAGTTACCAGTAAAAGAATAAAAAGGAACCCTCGCCGACAGAGCACGTCGACCAGGGAGGCCGCGGTCAAAGAGAGCATAATGCGAGACCTTTCTCAAATTCAAGAGAGAAGGGCCACTTCTATCGAACGGTTGATTCACGACAACGAAAAGTTCATGCCGAAGAATTCGTACAAATGCGATATCTGCACGAGGAACTTTCGTTCGGCTTACCATTTAGACCAGCACAAAAGAAACAACCACGAAGTGGGCGAAACTCAAGAAGACGCGGACATGCTAGAAGACGAAGAGGGTCAATGGACGTGCGAGAAATGCGGCCTCAAATACAACACGAAGACGTTGCTCCTGTATCACATGCGTAGAAAACACAATTccgatgttaattttcaatacacttGCCAATATTGCGGATTAGAATACGCCAAAAAAAACGGTTTGTACAAACATATGATGAGAAAACATAACGTTCAGAACTACACGTTTGAATCgcccaaagaaaaatataaatgcaagtATTGCGGCACAGCTTACGAGTTCAAACAGAGCCTGTTTCGTCACATGAAAACCAAACACTTGGAACCGGACTTGAATCAGATCGTGTACAAATGTAAGTTTTGCGGAACTTCTTTCGGACAACGTCAGAATCTTTTTGACCACATCAAAGAGCAACACGACAGCGAGGAGATATATTCATGTGAACATTGTGGATTCGTATGCGTCGAGAAGAACGAACTCGTGTTGCATTTCAGCGAAAACCATCTCCAGAACACGCTGACTAGCGGAGGCGAATGTTCCGAGAACGACATATCAGACGGGCACGTGCCCGTCAGCGAAGCGAAAGAAGAAATCCTCCAAACGTCGTGGTGGAAGTCTTCGACGACGTCAAACGGTAAACGAGcttgtaaattttgtaatatgatcCTGTCGAACGGTAACAGATTAAGATACCACCTGAAAGTGAAGCATCCCAACGAGTTTCAAGCGCTCAAAAACGAAATGACTTTCGAAGAGGAGGAAAAGAAGTATAAATGCGTCATATGCGGCTTGCAGTACAAGAACAAGATGTGTCTACGATATCATTCCAAATTGAAACACGGAGATCCGGCGAATCTTCAGAATCAATCGTACGGCTGCGAATATTGCGGCCAAACATTCAAGTCGACCACTTACTTAAAACAACACGTAAAGAAAAAACATGATGACGACGAAGATTACGTGACGAGTTCCGTCAAAGCCCGCAACAAGTACAAAcacgtttatattgaaaaacctcCTCCGAAAGTGTCCGACGACGAGAATGTCATCGCTTGCGAAGAAGTGCCGGAGCCTGAATCGGCAGATAAGCCAGACTTGGAAAAGCGATATATATGCGACGTGTGCGAAAACACGTTCACTTCGATCAGTTCGCTGAAGCACCACAAGCTGGCCAAACACAACAGCCCTTCGGACAAATTGTATCAGTGCCCTCATTGTTCGTATTGTGCCAAATTCAATCAGTATTTGCAAAAACACTTGGCTAGTAAGCACCCGGATTCGGATTTCGCTCCTCAGCGAGAAGTTCACATGTGCACCGTCTGCGACTACAAAAGCATGAACAAATATCACTATCAGCGGCATTTCAAAAGTCATTTCACCGAAGAGAAGCGGTTCATGTGCGAGTTTTGCGATTACCGAACGAACTTGCAGAGCTCGATCATCGTCCACAGACGTATCCATACAAAAGAGAAACCGTACGTTTGCGATATAGAAAATTGTCAGTATCGATGCGCTCAAAAGACGGCAATGACGATCCATCAGTTGAGCCACAATCCGGAAAAGAATACGCAATTTTGTCATTTGTGCAGTTTCAAAACGGTCAATAAGTACTTGTTCAAAGCGCACGTCAACAAACATAAATTGGACGATAAAGAGTACAAATGCGATCGTTGCACGTTCATATGCAAAGATTCTAAAAGCTTCGAGTCCCACAAACAAATACACATGgataatatgatgtttaagtGTAGCTATTGCGAATTCGAAACGCAGTTACAAATATCGTTGGAAGCGCATATCAAATCGGAGCATAGATACGACCAGAACCACATCGTACCCTTAGAAGTTCATATGAAAACGGAGCATCAGTACATTCAGAGCTCGCTCGACATGCACATGAAGCCCGAACATCAATACGGTCTATCGAGCATGCATTTGCACGACTCCCATATAAAACCGGACCATTACAACCCGATGCCGCTCGACTGCCAGATGAAACCGCACGAGCACCAGTACAATTCGATGATGAGCCCGCATCTGGACAGGCACCACTACAGTCCCATCCACGTGCCGATGGACGCCCACATGAACCATTTGGAGCATCGTCAGTACAACGCGGGCGGCATGATGCCCCTGCCGCTCGACTGCCACATGAAACCGGAGCATCGGTACACGCCGACGGGCATCGTCGACGCCAGCATATGCAAGCCGGTCAACTACGTTTACGACGGCAACGTGAGGTCGCAGATGGTCTCCGCCGATATGATCAACCCGTATTTGAATCCggtcaaatga
- Protein Sequence
- MEGPPGAEGAEGGAGGADSGGEREGEVPALKRPREPSLDGVHYDGYHELNMETPLQNAPDVVRSRENSPSTPSSVNDDDYKNSDSSDNTQTDNASSEDERLRNIVTSKRIKRNPRRQSTSTREAAVKESIMRDLSQIQERRATSIERLIHDNEKFMPKNSYKCDICTRNFRSAYHLDQHKRNNHEVGETQEDADMLEDEEGQWTCEKCGLKYNTKTLLLYHMRRKHNSDVNFQYTCQYCGLEYAKKNGLYKHMMRKHNVQNYTFESPKEKYKCKYCGTAYEFKQSLFRHMKTKHLEPDLNQIVYKCKFCGTSFGQRQNLFDHIKEQHDSEEIYSCEHCGFVCVEKNELVLHFSENHLQNTLTSGGECSENDISDGHVPVSEAKEEILQTSWWKSSTTSNGKRACKFCNMILSNGNRLRYHLKVKHPNEFQALKNEMTFEEEEKKYKCVICGLQYKNKMCLRYHSKLKHGDPANLQNQSYGCEYCGQTFKSTTYLKQHVKKKHDDDEDYVTSSVKARNKYKHVYIEKPPPKVSDDENVIACEEVPEPESADKPDLEKRYICDVCENTFTSISSLKHHKLAKHNSPSDKLYQCPHCSYCAKFNQYLQKHLASKHPDSDFAPQREVHMCTVCDYKSMNKYHYQRHFKSHFTEEKRFMCEFCDYRTNLQSSIIVHRRIHTKEKPYVCDIENCQYRCAQKTAMTIHQLSHNPEKNTQFCHLCSFKTVNKYLFKAHVNKHKLDDKEYKCDRCTFICKDSKSFESHKQIHMDNMMFKCSYCEFETQLQISLEAHIKSEHRYDQNHIVPLEVHMKTEHQYIQSSLDMHMKPEHQYGLSSMHLHDSHIKPDHYNPMPLDCQMKPHEHQYNSMMSPHLDRHHYSPIHVPMDAHMNHLEHRQYNAGGMMPLPLDCHMKPEHRYTPTGIVDASICKPVNYVYDGNVRSQMVSADMINPYLNPVK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00815326;
- 90% Identity
- iTF_00816023;
- 80% Identity
- iTF_00815326;