Hbet010268.1
Basic Information
- Insect
- Hydropsyche betteni
- Gene Symbol
- Lztr1
- Assembly
- GCA_028571205.2
- Location
- JAOXNN020000058.1:375250-378683[+]
Transcription Factor Domain
- TF Family
- BTB
- Domain
- zf-C2H2|ZBTB
- PFAM
- PF00651
- TF Group
- Zinc-Coordinating Group
- Description
- The BTB (for BR-C, ttk and bab) [6] or POZ (for Pox virus and Zinc finger) [1] domain is present near the N-terminus of a fraction of zinc finger (Pfam:PF00096) proteins and in proteins that contain the Pfam:PF01344 motif such as Kelch and a family of pox virus proteins. The BTB/POZ domain mediates homomeric dimerisation and in some instances heteromeric dimerisation [1]. The structure of the dimerised PLZF BTB/POZ domain has been solved and consists of a tightly intertwined homodimer. The central scaffolding of the protein is made up of a cluster of alpha-helices flanked by short beta-sheets at both the top and bottom of the molecule [2]. POZ domains from several zinc finger proteins have been shown to mediate transcriptional repression and to interact with components of histone deacetylase co-repressor complexes including N-CoR and SMRT [5, 3, 4]. The POZ or BTB domain is also known as BR-C/Ttk or ZiN.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 6.8e-12 2e-08 38.3 0.0 2 107 356 485 355 488 0.85 2 4 9.5 2.8e+04 -0.8 0.0 80 109 490 519 485 520 0.86 3 4 6e-21 1.8e-17 67.5 0.0 6 107 578 681 574 684 0.86 4 4 9.1 2.7e+04 -0.7 0.0 77 99 683 705 679 715 0.77
Sequence Information
- Coding Sequence
- ATGTCGGACAGCTCCTCGAAGtacggcgtcgagatcgacaacGGGCTGACTCTCGAGTTCGGCCCGTTCGAGACCGTGCACAGGTGGAAACGCATGTTGGAATGCGACGAGTTCGTGGGAGCGAGGCGCAGCAAACATACGGTGGTGGCTTACAAAGATTCCATTTATGTCTTTGGCGGCGACAACAGCAAGTCTATGTTAAACGACCTTCTGCGGTTCGACGTGAAAGAAAAGTCTTGGGGTCGAGCCTTCTCCATAGGAACGCCTCCCGCTCCCAGATACCATCACTCCGCAGTgGTTCATGGAACTTCGATGTTCGTTTTCGGGGGATACACCGGAGATATATTGGCCAACTCcaatttgacaaataaaaatgatctgtttgagtataaatttcaaaacggtcAATGGATTGAATGGAAATTTCCAGGAAAAACTCCAGGCGCTCGATCGGCTCATGGGGCAGCCGTGTACGATAACAAGATGTGGATTTATGCGGGTTACGATGGAAACGCTCGTCTCAACGATATGTGGACTCTAAACCTAACAgGTGAATGTAAGCAATGGGAAAAAGTTGAACAGCGAGGTCAATGCCCTCCAACTTGCTGCAACTTTCCTGCAGCAGTGGCTCGTGGACACATGTTTGTTTTCAGTGGACAGAGTGGCGCTAAAATTACGAACACTTTGTTCCAATTTAATTTCGCCGAaagaatgtggaCTAGAATTTCAACAGAGCACATTTTAAGAGGAGCTCCTCCAGCGCCTCCTCGAAGATATGGACACACGATGCTGCCACACGGACGTCATTTGTATGTGTTTGGAGGATCTGCTGATGGAACGTTACCCAATGAACTTCATGCTTATGATCTCGATACTCAAACATGgTCTGTGATCCATCCATCGCCAGATTCACAAGTACCATCCGGTCGCTTATTTCACGCAGGAGCTGTAGTAGGAGACGCTATGTATATTTTCGGTGGAACAGTTGATAATAATGTGAGAAGCGGTGAAATGTTCCGTTTTCAGttttcttcaTATCCCAAATGTACATTGCATGAAGATTTTGGGCGGTTACTAAGCTCTGGTCAATTTTGTGATGTTGAATTCTTAGTTGGATTAGACGAGACTCCTATTGCATGCCATTTGGCTATGGTGGCTGCCAGATCTGTATTTCTCAAgaacaaaataaaATTGGCTATGGAACAGAGAGAGCGAGAAAATGAGACATCGACTAATACTACTAAGAGTAAAATGCTCAGAGTCAAATTACCAGAAACTGAACCAGAACcattcaaaatggttttaaattatatttatactgatCGTATTGATCCTACAGAAAAggTTTCAGAACCATTTTGTCCATCTATGGTTGAGTTAGTGATGGAAGTATATGGTGCATGCGTTAGACTTTTGATACCTCGTTTACAACGACTGTGTGCACGTTATTTACGTGCTGGTATCGGAACAAATACAGTTTTGCATGCATTAGCTGCTGCTCATACTCGACATCTTCCAGCTGTCAAAGAATATTGTTTGAGATTCATAGTGAAAGAATCcaattataatactattgtGATGTCATCTGAATTTGAAACATTAGAACAATCATTGATGGTCGAAGTCATAAGGCGTCGACAACAGCCTGTACCTAGATGCGCTCCAGATCCTGCAGATGAAGTTAGCGAGggTACTACATTAGAACAAGATTTGGCTGTGTTCTTGCAAAGCAGTGGAAAAGAGTTATGTGATTTGACATTAGTAGTCGGCAATACATCATTGCCGGCTCATAAAGCTGTTCTCGCTGCACGCTGTACGTTTTTCGAAGCAATGTTTCGCTCGTTTATGCCCCCTGATAATACAGTCAATatacaaATTTGTGACATTTGTCCATCTCGTGAATCAATTGATTCGCTTCTCAGATATATTTACTATGGTGAAACAAAAATGCCTCCGGAGGATTCGTTGTATCTATTTCAAGCTCCTCATTATTatggttTTGCAAATAATAGGCTTCAAGCattttgcaaacaaaatttggaaaataatgtgacttatgaaaatgttattccAATATTGCAAGCTGCTGATAAAATGCAAGCGTTTGATATTAAGAATTATGCTTTAAGCATGatagttcataatttttcaaaggTTGCAAAACTTCCTCAATTGAGCAAATTAAGTAAAGAGCTATTGTTGGATATAATTGTGGCTGTAGCTGATGAATTGAGTGAAGCTCGCATATGTCAAGATATGTCTTCTGCAAGTATTCACAGCGAAAATGCTGATATGACAGCGGAGAAATTAATTATGGAAATGTTACCGTGGCAGCCTAAATAA
- Protein Sequence
- MSDSSSKYGVEIDNGLTLEFGPFETVHRWKRMLECDEFVGARRSKHTVVAYKDSIYVFGGDNSKSMLNDLLRFDVKEKSWGRAFSIGTPPAPRYHHSAVVHGTSMFVFGGYTGDILANSNLTNKNDLFEYKFQNGQWIEWKFPGKTPGARSAHGAAVYDNKMWIYAGYDGNARLNDMWTLNLTGECKQWEKVEQRGQCPPTCCNFPAAVARGHMFVFSGQSGAKITNTLFQFNFAERMWTRISTEHILRGAPPAPPRRYGHTMLPHGRHLYVFGGSADGTLPNELHAYDLDTQTWSVIHPSPDSQVPSGRLFHAGAVVGDAMYIFGGTVDNNVRSGEMFRFQFSSYPKCTLHEDFGRLLSSGQFCDVEFLVGLDETPIACHLAMVAARSVFLKNKIKLAMEQRERENETSTNTTKSKMLRVKLPETEPEPFKMVLNYIYTDRIDPTEKVSEPFCPSMVELVMEVYGACVRLLIPRLQRLCARYLRAGIGTNTVLHALAAAHTRHLPAVKEYCLRFIVKESNYNTIVMSSEFETLEQSLMVEVIRRRQQPVPRCAPDPADEVSEGTTLEQDLAVFLQSSGKELCDLTLVVGNTSLPAHKAVLAARCTFFEAMFRSFMPPDNTVNIQICDICPSRESIDSLLRYIYYGETKMPPEDSLYLFQAPHYYGFANNRLQAFCKQNLENNVTYENVIPILQAADKMQAFDIKNYALSMIVHNFSKVAKLPQLSKLSKELLLDIIVAVADELSEARICQDMSSASIHSENADMTAEKLIMEMLPWQPK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01367037;
- 90% Identity
- iTF_00158134; iTF_00815870;
- 80% Identity
- -