Hbet003670.1
Basic Information
- Insect
- Hydropsyche betteni
- Gene Symbol
- egg_1
- Assembly
- GCA_028571205.2
- Location
- JAOXNN020000021.1:1453677-1460986[+]
Transcription Factor Domain
- TF Family
- MBD
- Domain
- MBD domain
- PFAM
- PF01429
- TF Group
- Unclassified Structure
- Description
- The Methyl-CpG binding domain (MBD) binds to DNA that contains one or more symmetrically methylated CpGs [2]. DNA methylation in animals is associated with alterations in chromatin structure and silencing of gene expression. MBD has negligible non-specific affinity for DNA. In vitro foot-printing with MeCP2 showed the MBD can protect a 12 nucleotide region surrounding a methyl CpG pair [2]. MBDs are found in several Methyl-CpG binding proteins and also DNA demethylase [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 1.7 1e+05 -3.1 0.0 17 36 912 931 909 932 0.86 2 3 0.41 2.5e+04 -1.1 0.0 23 38 988 1002 968 1003 0.80 3 3 1.2e-12 7.3e-08 35.9 0.0 6 75 1036 1098 1032 1100 0.89
Sequence Information
- Coding Sequence
- ATGGCGGATAAACCTGCTGAATCTCCACCTATTGAACCTCAAGATGCTACAAACAACCAAGAAAAAGatGACAGCCCAAGCAGTGAAAAAGATCCAGAATCGTCAATCGATGTTTTGGGCTTGTTGGCGGAAGCCGTTAGTCGAGATCGTATCGAGAGCGACGAAGAAATGGATGTGGATGTCGACGCCGATCCAGAAGACGAAGAAGTACACACACCCGACAGTGTTACGGAACAAGAagaaagcaACGATGCTGGAGAAAATATTGAAGTGGCTCCACTCGGTGAAAACGATGACGATCAACAATATAACTATCAAGATGATGAAATCGATATAAACGAAGATTTCACATTACAGTTTGATATTAACGAAGAAGAAATGTCGGTCGATAACAATACTTTGATAACTGAAGTTGTCAGCTTAGCACCGATTGAAAAACTCACGGAAGATAATCAAATAGAAATTGATTCTAAAGATGCTAAATCTGATGAAATTACAGATtctaaatttgatgaaagtgatttaaacatcaataaatcagatttgaatgatgataatataaCCACATTGCCGGAAACTCCATCTAGTGGTATTAATACGGAAAAATCAAAGTTGTCGGAAGATATTATCAAAGGATTAAGAGAAGAAGCTCAAAGAGTAGCAGTAGGTGATGTATCGAGAAAAGATTTAGAAAATCTAGGCAAAGAACTTCAAAATGCCATGAAAACTTTATTCGGTCAATCAATACCCAAAAATGATGAAATCCACAACATtgatattaaaaatttagacATGCCTTCTATAATGGATGTATCGACGTCGAGTATATTGGAAGATAACAAAGAACCGACAAATACAGAAAAAACTGaagaaataatcgatttattagatgagaaaattcttcaaaataatgCAGACTCTGAACAGCCAACGATAGAGAAACCTGATTCTATTAAAATAGAGGATTCTGATGAAAAAGTGGAATGTAAAACAGAAGAAAAGAAATCTTCGAAAGATGTCATGTATGTTAATTTAGACGAAAGTTCATCAGATTCGGAAGctACCAGTGTAAGAATTCCGTCTGCGATAGAAGTCATATCATCGAGCACAATGAATAATTCTACAATCTCACATACTGATGATTCAGGAGCTAGCGTTATTAGTGGATTGCCTACGACACTAAATAAAGCTTCTAATTCAGTGCGGCTAAATATGGCAGAAATTACAATATCTACGATTCCCAAAACTGACGAAACTCAGACAACTCAAGAATCTATGGAAATCTTAAATTTAGATAGTGACGATGAAGAAACATCGAAACAGAGCAACATTGGTGaaaaaaaaatggaagttgTCTCAGAAGAAAAAAGTGATCAAACGAAAATAGACGAAAAGTCAAAATCTAATACCActtgtgtaaatttaaaatgtgaaagtaAATCTGATGTCCCGATGGTACCTTGCCCTATTTTCATGCTCGgaatgtataatgtgaaaagAACTAGAAAAATGGTACATCCGGAAATTTGTCAAACATGCTTTGATTCTGCCATCAACGAAACcgagtcaCTCGTATCTAAATTTAAAAGTGGAAAACCATTGATtgacataaaattacaaaataacgaCGAGAGTGTTGAAGTTTTGGATTCCGATTCGGACGATGAGGATAAAAATGACGAATTCATTGCTTTGCCAGGTTATGATTCTCTCACAGCCAATGAGCTGGAGTTCGTAACTGAAAAGTTACCCGATATGATGGAAGAAATTTCTcggaaatataaattcaatgaacaaattcaaatgtGCAATGAACTTATAAATAATCAGGCAGTGCAATTAGagcaAGATACATCAGATTTATATGTGCAATAcaatgcattagaaaaaaacttgaactATATTAGAAATACTTTGTATAGTACAGTTAGAATTACTCGGAAACACTTACCAGAATTATTAATCCCCGTAGATCATGAAGAATTTGAGGATCCCGCAATCCTCCCTCCGGTAGGAACTAATACATTTGAGCCGTTAAAGGTCGGAGAACATGTTTACACTGTGAAACATTCGATATTCGGAGCATGGATACCTGCTGTTATAATGGAAATCAATCCCGTCGGAACACCTATGGCGAATGGTATGCCACTTCTATTTTCACTCTTGagtgttaaatttcatataggTGGTCGGAAAACCTTGAAGCAAGTCACAGGACGTCAAGTTGCATATTTTCAGCCTGGCGAATTCCTTTATTCGATAGGTACTAGAgttattgcattatttaaagATAATGTCACTGCTTCGTTTAAAAAGGACTCTTATTATTCTGGCGTTATCGCGGAAACACCATCCCAATTCAACAGATATagatatttagtatttttcgaTGACGGTTACTCGCAGTATGTATATCACAAGAATATATTACCCGTGAGCGAAAAGTCTGATAAAGTATGGGAAGACGTGCATCCCGATTCACGAGATTTcgtgagaaaatatttgactaGTTATCCAGAACGGCCAATGGTGCGGCTCGAAATCGGACACATTTTGAAAGCAGAACATAATGgTGGCTGGTGTAGTGCAGTCGTTAGGGAACTGGATGCATCCTTGGCTCTTTTGCAGTTCGAAGGCAGCAATAAGATAGAATGGATATATCGCGGCAGTACGAGGTTGTTGTTGCTTTATCAGCAGTTGCAGGCTGTCGATCGGCGTGCACATGGTTCTGGACGCCACAGGATTTTGAGAACTACAAACCATTCTTTGCGCAAAatgaatgTACCTTATGTTGAATATACGAGAACGGCAGATGATAATTTAAAACCAATAGAAGTTGAAAATGAAGAGAACGATGTACCTGAAGATGATAAAAGTACTAAACCTTTACGTGCCGTAGCAAAAAAGAGTACTTCTGCCCCTGTTGTTCCGAAAGATCAAGATTTTACTCCAGAAGTAATGGAAAACGGCAATTTAGTCAGAAGTAGAGTTGTTTACTATTCACCAAAAATATGGATACATCCCAAAAAAATGGTTCCCCACGAATGTGGTCCGTATTGTCTTAATAGGAAAACACCTTCTTTATCAGGACTTCGCTCATATCATCCACTTGCCAAACCATTATTATCAGCTTGGGAAAGATTATTAGTCAAACATAAATACAAGAGAGGAGTAATGTATCGTGCACCTTGTGGTAGAAGACTACGTAACATTCAAGAAGTACACAAATACTTACGTATGACTAAATCAGACATGAGCGTTGACCTCTTCGATTTTGATATCCGGATGCATTGCTTAGCCGAGTTTGTTGCTACTAGTTGCTTTGTCAAAAAAACTGATATATCTCATGGAGTAGAAGCAATGGCAGTTCCATGCGTGAACTATTACGACCATTCATTGCCAGATTCCTGGACATATAGCACTAGTCGTCAAGCGACTGAAGGAGTGGATCtcaatttagatgaaaatttcttatgCGGTTGCGATTGTACTGATGATTGCCAAGACAAGGAAAAATGTCAATGCTGGAAGTTGACTTATGAAGGTACTAGATTCATCGGATTAAGAGATGAAAATGTTGGTTATGAGTATAGAAGACTGTATGAACAAGTACCGACTGGTATTTATGAGTGTAATAGcaggtgTAAATGTGCTTCTACTTGTCTCAATAGAGTCGTACAGCATCCATTGCAATTGAAATTACAggttttcaaaACTTACAATAAGGGATGGGGAATACGAGTTTTAAACGATATACCTAGAGGTTGTTTCATATGTGTATATGCTGGAAATTTATTGACAGATGCTGCCGCTAATGATggtggtaaaaaaaatgaaggcgATAAATATTTAGCTGATTTAGATTACATAGAAgttgtagaaaaattaaaggaaaattttgaatttgacatTCCTGAAGCAGATAAAATCTTAGATAGAGCCaatGATGACAGTAATaaagaagatgaagatgaagatgatgacgacgacgatgacgatcaAGAAGATGAAGATGTCGACGTTAATAACCTGATATCATCCAATCGTCCAGAATCCGATGAAGAGTTCAGTCCGATCTATCCATGTCAAGATGTAGCTCGGAAGGAAATCAAGACAAGACTGAGAGTGagacaaacacaaaaaaatatcagtaacGAAAAAGCTGGTGAAGGTAATaaagccaataaaaatttaaaaaaggtcaCAGCGGAAAACAGTAAAAGCGGCGAAAACTTACCAAAGACAAAAGATAAACTAGGAGATGATTCAATCACAATCAGTGACGATGATGAAGtTATAAGAGAACCTTCGAGATTTGCCGCTCCTGAAGGATTCGACGATGATGAATACGTGCCGCGTTTTaaatCTGTACGTTCTTtttatggtgatgatgatgcaTGTTTCATCATGGATGCAAGAGTTACTGGCAACATCGGACGTTACTTAAATcatTCTTGTTCACCGAATGTGTTTGTTCAAAATGTATTTGTCGATACACACGATCCTCGTTTTCCTTGGGTAGCTTTCTTCGCTTTAGAACATATTCGTACTGGTACCGAACTTACATGGAATTATAATTACGATATCGGTAGTGTTCCtggaaaagtaatttattgtaaatgtgGAGCTGCTAATTGTCGTGGCCGTCTTTTgtga
- Protein Sequence
- MADKPAESPPIEPQDATNNQEKDDSPSSEKDPESSIDVLGLLAEAVSRDRIESDEEMDVDVDADPEDEEVHTPDSVTEQEESNDAGENIEVAPLGENDDDQQYNYQDDEIDINEDFTLQFDINEEEMSVDNNTLITEVVSLAPIEKLTEDNQIEIDSKDAKSDEITDSKFDESDLNINKSDLNDDNITTLPETPSSGINTEKSKLSEDIIKGLREEAQRVAVGDVSRKDLENLGKELQNAMKTLFGQSIPKNDEIHNIDIKNLDMPSIMDVSTSSILEDNKEPTNTEKTEEIIDLLDEKILQNNADSEQPTIEKPDSIKIEDSDEKVECKTEEKKSSKDVMYVNLDESSSDSEATSVRIPSAIEVISSSTMNNSTISHTDDSGASVISGLPTTLNKASNSVRLNMAEITISTIPKTDETQTTQESMEILNLDSDDEETSKQSNIGEKKMEVVSEEKSDQTKIDEKSKSNTTCVNLKCESKSDVPMVPCPIFMLGMYNVKRTRKMVHPEICQTCFDSAINETESLVSKFKSGKPLIDIKLQNNDESVEVLDSDSDDEDKNDEFIALPGYDSLTANELEFVTEKLPDMMEEISRKYKFNEQIQMCNELINNQAVQLEQDTSDLYVQYNALEKNLNYIRNTLYSTVRITRKHLPELLIPVDHEEFEDPAILPPVGTNTFEPLKVGEHVYTVKHSIFGAWIPAVIMEINPVGTPMANGMPLLFSLLSVKFHIGGRKTLKQVTGRQVAYFQPGEFLYSIGTRVIALFKDNVTASFKKDSYYSGVIAETPSQFNRYRYLVFFDDGYSQYVYHKNILPVSEKSDKVWEDVHPDSRDFVRKYLTSYPERPMVRLEIGHILKAEHNGGWCSAVVRELDASLALLQFEGSNKIEWIYRGSTRLLLLYQQLQAVDRRAHGSGRHRILRTTNHSLRKMNVPYVEYTRTADDNLKPIEVENEENDVPEDDKSTKPLRAVAKKSTSAPVVPKDQDFTPEVMENGNLVRSRVVYYSPKIWIHPKKMVPHECGPYCLNRKTPSLSGLRSYHPLAKPLLSAWERLLVKHKYKRGVMYRAPCGRRLRNIQEVHKYLRMTKSDMSVDLFDFDIRMHCLAEFVATSCFVKKTDISHGVEAMAVPCVNYYDHSLPDSWTYSTSRQATEGVDLNLDENFLCGCDCTDDCQDKEKCQCWKLTYEGTRFIGLRDENVGYEYRRLYEQVPTGIYECNSRCKCASTCLNRVVQHPLQLKLQVFKTYNKGWGIRVLNDIPRGCFICVYAGNLLTDAAANDGGKKNEGDKYLADLDYIEVVEKLKENFEFDIPEADKILDRANDDSNKEDEDEDDDDDDDDQEDEDVDVNNLISSNRPESDEEFSPIYPCQDVARKEIKTRLRVRQTQKNISNEKAGEGNKANKNLKKVTAENSKSGENLPKTKDKLGDDSITISDDDEVIREPSRFAAPEGFDDDEYVPRFKSVRSFYGDDDACFIMDARVTGNIGRYLNHSCSPNVFVQNVFVDTHDPRFPWVAFFALEHIRTGTELTWNYNYDIGSVPGKVIYCKCGAANCRGRLL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -