Hbet003994.1
Basic Information
- Insect
- Hydropsyche betteni
- Gene Symbol
- sip1
- Assembly
- GCA_028571205.2
- Location
- JAOXNN020000021.1:5611643-5614772[-]
Transcription Factor Domain
- TF Family
- GCFC
- Domain
- GCFC domain
- PFAM
- PF07842
- TF Group
- Unclassified Structure
- Description
- This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.1e-47 1.6e-42 150.0 4.6 4 275 371 626 368 626 0.94 2 2 1 1.6e+05 -4.1 0.0 194 211 636 653 627 658 0.62
Sequence Information
- Coding Sequence
- ATGTCGGGggatgaaatggaaaaattcgaaGTGACAGATTACGATCTCGACAATGAATTCAACATTCACAGGCCTTTTAAACGTCTCACTAAAGAACAGCAAATATTTGGCATTTGGGCGCAAGATAGTGACGATGAAGGGAACGAAAACGCAATGGGTAAACGGGGAcgatctaaaaaacaaaaagattataCCACACCTATCGATTTTGTTGCTGGTGGTATCCAACAAAGTGgcagaaaaaatgaagaaaaagAAAAAGCTAAAGATGACTCCAACGATTTGATGCCCGACGGTGTAAATTCTTCCTCCGACGAAGATCAACCTGATGTTCCTGACGAACGCCAAACTGCTGGATTAAGAAAACGTGGCGTTACTGGATACCAGCCCCAAGTCTTGAGCAGTGGCGTTGGTAATTGGGAAAGACATACTAAAGGAATCGGTGCTAAATTGCTTTTGCAGATGGGGTATCAACCTGGTAAAGGTCTAGGGAAAGCTCTTCAGGGTATGTCTACTCCTATTACGGCAGCTGTTCGGAAAGGCCGAGGAGCTATCGGTGCTTATGGACCAGaggtcaaaatgaaaaaaggcttGGATgcgattgatgaaaataaaacaccacAAGGGAAAGACGAAGAACAGAAATCTcatcaatggaaaaaaaataataaacaacgtTACTATTATAGAGATGCCGAAGATGTCATTCAAGAAGGAAAACCGGCACCTCCAGCCCATACTCATCAAACTGCTGCTTTGGCTCGAGTGCCAGTCATTGATTTACGAGGTCCTGAAAAGAGAGTTTTGAGTGGTTATCATGCGCTTCGAGCTGCTGCTCCACGTTACGAAGACGTTTCTAGAAAAGAGTGTTCTAATTTGGCTCTTCCTGAATTATTGCACAATCTCAATTTATTAGTGGACATGTGTGAACAGgATATAATCGATTGTTCCCGTGAAGGACAAACAGCTGAAGATAAAGAAGTTGCACTGGAACGTGATAAGAAATCATTGGAAGATGAACTTAAACGAAGCAATGAAGAAATCAAAATCATGGAAGATATTTttgacgaaattcaaaaattgaatgaatctgATTTATCTTTGGATGATGCATTTGAGATTTTAAAGACAGTGAAGcTTTCACATCCCATGGAATATGACTGTTTAGGACTAGGAAGTTTTAGTGCTATCGGTGGTAGTTTACGAAGCCTAATGGGTTCAACATTAGCCTCATGGCTACCATTGAGATCCCCACATGAACCTTTGACTATATTAGAAAAATGGACTCCACTTTTAGAACCTCAAACACTGCAAGAAATATTTTGGAAGGCTTGGCTGGAACAAGTTCAACTTGcttctttagaATGGGATGTTAGAGAACCTGGCCCtatgaaaacattaattgaGACATGGGGTAATATTGCACCACAGCAAGAAATGAGAAACGTTTTACGTTCTTCTATTGTTCCTCGTTTATCCGTTACTGCTATGCGTTGGGATCCTACTGTTGACACATTACCTTTACATTACTGGATTTTACCATGGCATCAGTACGctggcGATCTTTTAGAAGAGTCTGTGTATCCCGAGTTACGCTCCCGTCTCGTATCAGCATTGTCGGCGTGGCATCCAGCAGATGGATCCGCTTTAGCTTTATTGAGGCCATGGTCTCAAGCTTGGTCTCTTGCTTTGCCAGCTTTGACTAGAGCGCATATTCTTCCAAGGCTTGAAACTTGTATGCGTACAATTCCAGTTGAACCAGATTCTAGTCCAAGTGaATCATGGGGATGGTGTGCATGTTGGCAAGAAATCATAGGATCTCGAGCTTTAGCTGGTGCAGCAGGGAGAGCATTATTGCCACGTTGGTTAGCTGCTTTGGCTTCATGGTTGAATCGAAGACCTCCCCATGCTCAtctcatttcatattatagCATGTGGAAGaacttATTTTCTGAAGAGTTATTACGAGAACCAGAATTCGCTGATACATTCCGTAAAGCTTTAGATATGATGAACAGAACTATGGATACTCCAGTTCAAGCGCCGCCCCCGCCTCCACCTGCACCTAGAATACCGCCTTTGAATAATTCACATGCCATAGCTGAAGTGATGGCAAGCAGTAatcaacaaaaaagttttacagaaCTGTTAGAGACAAAGTGTTTAGAACGTGGTCTTAGTTTTGTGCCAATGGTTGGAAGAACCAGAGAAGGACGTCCTCTCTATCGGATAGGTTCTATCTTTCAGTGTTATGTAATGAGGAATGTCGTGATGTATTCTAATGATTTAGGCAGAACCTTCCAACCGATATCGCTCGATGCTTTACTTCAAGTAGCAGCGACTCAACCTTAG
- Protein Sequence
- MSGDEMEKFEVTDYDLDNEFNIHRPFKRLTKEQQIFGIWAQDSDDEGNENAMGKRGRSKKQKDYTTPIDFVAGGIQQSGRKNEEKEKAKDDSNDLMPDGVNSSSDEDQPDVPDERQTAGLRKRGVTGYQPQVLSSGVGNWERHTKGIGAKLLLQMGYQPGKGLGKALQGMSTPITAAVRKGRGAIGAYGPEVKMKKGLDAIDENKTPQGKDEEQKSHQWKKNNKQRYYYRDAEDVIQEGKPAPPAHTHQTAALARVPVIDLRGPEKRVLSGYHALRAAAPRYEDVSRKECSNLALPELLHNLNLLVDMCEQDIIDCSREGQTAEDKEVALERDKKSLEDELKRSNEEIKIMEDIFDEIQKLNESDLSLDDAFEILKTVKLSHPMEYDCLGLGSFSAIGGSLRSLMGSTLASWLPLRSPHEPLTILEKWTPLLEPQTLQEIFWKAWLEQVQLASLEWDVREPGPMKTLIETWGNIAPQQEMRNVLRSSIVPRLSVTAMRWDPTVDTLPLHYWILPWHQYAGDLLEESVYPELRSRLVSALSAWHPADGSALALLRPWSQAWSLALPALTRAHILPRLETCMRTIPVEPDSSPSESWGWCACWQEIIGSRALAGAAGRALLPRWLAALASWLNRRPPHAHLISYYSMWKNLFSEELLREPEFADTFRKALDMMNRTMDTPVQAPPPPPPAPRIPPLNNSHAIAEVMASSNQQKSFTELLETKCLERGLSFVPMVGRTREGRPLYRIGSIFQCYVMRNVVMYSNDLGRTFQPISLDALLQVAATQP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00158049;
- 90% Identity
- iTF_00815804;
- 80% Identity
- -