Hbet002178.1
Basic Information
- Insect
- Hydropsyche betteni
- Gene Symbol
- -
- Assembly
- GCA_028571205.2
- Location
- JAOXNN020000012.1:312330-315333[+]
Transcription Factor Domain
- TF Family
- AF-4
- Domain
- AF-4 domain
- PFAM
- PF05110
- TF Group
- Unclassified Structure
- Description
- This family consists of AF4 (Proto-oncogene AF4) and FMR2 (Fragile X syndrome) nuclear proteins. These proteins have been linked to human diseases such as acute lymphoblastic leukaemia and mental disabilities [1]. The family also contains a Drosophila AF4 protein homologue Lilliputian which contains an AT-hook domain. Lilliputian represents a novel pair-rule gene that acts in cytoskeleton regulation, segmentation and morphogenesis in Drosophila [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1e-14 3.1e-09 40.7 0.1 4 102 23 128 21 158 0.73 2 2 0.0012 3.5e+02 4.2 0.2 344 395 162 215 150 235 0.74
Sequence Information
- Coding Sequence
- ATGGTCGTAATCGGGTGTATTGTCGTAAAAGTCGGTTTGGTCATCGTCGACACGCTCGCCAGTGTTGAGCGAGATAGTCTGCGCGAGAGGGAGCGGCACGCCCGCGCGCAGATGTCCTCGCAAGGGAACGAAATTCAGGAAGGTGTACCCATGTTTAGGCCGCCGGTTAAAGTCAGTCCGGCGGCTACAGATCGTGTTACCCAACAAATTCAAAGCAGGCTTGGTGATTATCACACAGTCAAACATTTTTTGGACGATCCCAAATCGTCAATAGGTGTTTATGGCGAGCCAGCTAGTCCAGCTCCAGGTGGACCGTTGCGAGGGGGTGAATTCAAGAAACCTCATCATACGTCTTCTCAAAATGGAAGGCCCCATCAACGGATGCCACACTACCCCAAatgTCCAGAAGGGCCGCCAATGGGGTTACCCAAGCGAGGACCGACCGCCAGATTGTATAATGGACGAGTACAACCGactttGAACCCCGATTTGGACGATGTACAAACTATATTCAATgaaATGAAATCCTTGTCTGTTGTTCAACCATTGTCTGCTATTGCTCAAACACCTCATAAAGAAATggaatctaaatttatatttaatgctgGAGCTCTTATAAAAaTCATACCAAATTCAAACAACCATCCCCAACACAAACACCACAATATGCTTACATACAACAAACCCAACCAGCCAGTCGGGTTGCCAGTTGTCCTTTATCAGAAGGGAAAGTCGTCTTTTATCAGAAAGAAAAGTcgtttaaaatag
- Protein Sequence
- MVVIGCIVVKVGLVIVDTLASVERDSLRERERHARAQMSSQGNEIQEGVPMFRPPVKVSPAATDRVTQQIQSRLGDYHTVKHFLDDPKSSIGVYGEPASPAPGGPLRGGEFKKPHHTSSQNGRPHQRMPHYPKCPEGPPMGLPKRGPTARLYNGRVQPTLNPDLDDVQTIFNEMKSLSVVQPLSAIAQTPHKEMESKFIFNAGALIKIIPNSNNHPQHKHHNMLTYNKPNQPVGLPVVLYQKGKSSFIRKKSRLK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -