Basic Information

Insect: Hycleus phaleratus
Gene Symbol: -
Assembly: GCA_013841185.1
Location: JACDRP010000124.1:57888-63220[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 3.1 2.1e+02 2.2 0.7 1 22 227 248 227 250 0.71

2 11 4.3e-05 0.0028 17.5 0.3 1 23 293 316 293 316 0.93

3 11 1.5 1e+02 3.2 0.1 2 19 382 401 381 403 0.90

4 11 1.4 96 3.2 4.3 1 19 413 431 413 436 0.83

5 11 5.7 3.8e+02 1.4 0.2 2 23 444 466 443 466 0.70

6 11 6.7e-06 0.00044 20.0 0.3 1 23 472 494 472 494 0.96

7 11 0.0021 0.14 12.2 5.2 2 23 508 530 507 530 0.95

8 11 0.00012 0.008 16.1 1.9 1 23 536 558 536 558 0.97

9 11 0.03 2 8.5 8.1 1 23 564 586 564 586 0.98

10 11 0.015 1 9.5 3.5 1 23 592 615 592 615 0.94

11 11 0.62 41 4.4 2.0 1 21 622 642 622 644 0.90

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	3.1	2.1e+02	2.2	0.7	1	22	227	248	227	250	0.71
2	11	4.3e-05	0.0028	17.5	0.3	1	23	293	316	293	316	0.93
3	11	1.5	1e+02	3.2	0.1	2	19	382	401	381	403	0.90
4	11	1.4	96	3.2	4.3	1	19	413	431	413	436	0.83
5	11	5.7	3.8e+02	1.4	0.2	2	23	444	466	443	466	0.70
6	11	6.7e-06	0.00044	20.0	0.3	1	23	472	494	472	494	0.96
7	11	0.0021	0.14	12.2	5.2	2	23	508	530	507	530	0.95
8	11	0.00012	0.008	16.1	1.9	1	23	536	558	536	558	0.97
9	11	0.03	2	8.5	8.1	1	23	564	586	564	586	0.98
10	11	0.015	1	9.5	3.5	1	23	592	615	592	615	0.94
11	11	0.62	41	4.4	2.0	1	21	622	642	622	644	0.90

Sequence Information

Coding Sequence: ATGGAAAACGAGGATGAATCGACATCGTATTTGAAATTCCTAAACGATACAACCACCCAAAATTATCTACTACAAAATACAGACGGTTTTACCGATATATTACCGGTCGAATCGATATTCACTGAAATCAATTCAGACTGGCACAGTGGGGGCTTTCCGATACTATTAAGTGGACCTCTAATTGCTGACGAGAATTGTTCTACCGACGCGGATGTTCAATTACTCGCCGAAGAAACGACAAATAGTCCAACAACTGATGATTCGAACAGTAATACGGTAACTTTTTTAGAAAATATTGAATTAGCGAATGATCCAACAACAATACCGAATAATTTGTTATTAACAAATGATGTTTTGTTACAATTGAAAGATGCAACTGTTGAATGTGATGATAGTGATAATCAAATTAGTGAGGATATTATCAATGATAAAAATACGAAAATTGATACGGTAACGCATATTATAAACGGTAATACTTATTCGATAACAACGTACACGCCACAAATCGATGTCGACGAGAATCTCGAAGGAAATGATAATTCGATACAATTACTAAATGTCGACGGTAGTGTTACAACAGTCAATCAAGATTCTTTGAATATAATCGAAAATACAAACAATGAGAGTGATGGTAATAATGTTGGAAAATTTGACGATTATTATTGCGAAATTAAGGCCTACAAGTGTAAAATTTGCTCGTTTTTATCGGAAACTATCGACGATATTACCGGTCATATCCACAATCAACACGGCAAAGAATTGAGGAATACGTCGGAAAATATAACAATAATTAACGATAATGTCGATAGTAGCAATTTAATTGGAGCCAAATTAATGTCGATATTGAATAATAATCGCGAGACGAAACTAACAATGTTTCTATGCAGTGAATGTGGTAATGGTTATTCGAATAAAGACGATTTAAAACAACATATGGTAATGACGCATAATTTAATTTGTGTTCAATCGAATTCTAGTGAAGTCATTAAAATTAATAATACAGATAATAGTAATAATATACAGAATGATAAGACTGATGTTAGGATAAATAAGTTAATCGAAACTAATGAGAAGGCAAAGCAATCTGTACGTAATCAATCGGCTACTTTATTGAAGAAACAACAGAAATCGATGAAGAAAATTAAATGTTCGATAAAAGGGTGTCCGTTACGTTTTGCAAGAGACGATCTACGACAACGCCATGAAGATTGTCACGTTAATCAAGAGAAGAATAAATTTCAATGTTCCGTATGCAAACAGAAATTCTCAATGTGGCGTTTATGCAATATGCATTTATGGAAATGCCATTCTATTGATTTGGGTCTATTGAGTTGTCCTGTATGCAATGAATTCAAATCGAATAGCTCAGCACGGATGTTGAACCACATGAGCATACACAACGACGAACGCCCGTTTATTTGCAAAACGTGCGGTAAAGGCTTCAAACAAGCGCCCCAATTGCGCAACCATGAAGTAACCCATCAATCACGGGACAGTGTACCGAATTGGTTGTCGGTGAAACAGTGCGAATTTTGCGATCGTTATTTCACCAATACTAAATGTTTGAAGAAACACATCAAATTCGTTCACGATAAATTCAAACCGTTCATTTGCAATATTTGCGGACATCAAACGTCAAGAAAAGCAATGTTACAATTACATTACCGACAACATACCGGCGATAAGCCGCATCAATGTTCGTATTGTGATTACAAAACCGGCGATCATAACTGTCTACGGCGGCATCTAATGCGGCATTTTGGCGTGGTGAAATATTCGTGTCCTTATTGTAATTATCAATGCATTCAAACGACTTCATATAAACAACATTTAGCGAATAAACATCCAGGTAAAGAGGGTATTCATTCGTGTACAATTTGTAATTATACAACAGTGAATGTGGCAGCGTATTTGTCGCATGTAAAATGTCACGAACACGATAAAAAATTAAAACGTAATAAATCCGAAAAAATCAACGATAAATCTGTTAATACATCGAAATCGAATTCTAAAGAGAATTCTAATCCTGTTGAAGATGACGAAACTCAAAGTTGTTTCAATAATGAGCAATCCGAAGAGACTGTCGATACCGGCGGTATAACAATACCGGCCGAATTTGACTTGCCATTAGTTCCATAA
Protein Sequence: MENEDESTSYLKFLNDTTTQNYLLQNTDGFTDILPVESIFTEINSDWHSGGFPILLSGPLIADENCSTDADVQLLAEETTNSPTTDDSNSNTVTFLENIELANDPTTIPNNLLLTNDVLLQLKDATVECDDSDNQISEDIINDKNTKIDTVTHIINGNTYSITTYTPQIDVDENLEGNDNSIQLLNVDGSVTTVNQDSLNIIENTNNESDGNNVGKFDDYYCEIKAYKCKICSFLSETIDDITGHIHNQHGKELRNTSENITIINDNVDSSNLIGAKLMSILNNNRETKLTMFLCSECGNGYSNKDDLKQHMVMTHNLICVQSNSSEVIKINNTDNSNNIQNDKTDVRINKLIETNEKAKQSVRNQSATLLKKQQKSMKKIKCSIKGCPLRFARDDLRQRHEDCHVNQEKNKFQCSVCKQKFSMWRLCNMHLWKCHSIDLGLLSCPVCNEFKSNSSARMLNHMSIHNDERPFICKTCGKGFKQAPQLRNHEVTHQSRDSVPNWLSVKQCEFCDRYFTNTKCLKKHIKFVHDKFKPFICNICGHQTSRKAMLQLHYRQHTGDKPHQCSYCDYKTGDHNCLRRHLMRHFGVVKYSCPYCNYQCIQTTSYKQHLANKHPGKEGIHSCTICNYTTVNVAAYLSHVKCHEHDKKLKRNKSEKINDKSVNTSKSNSKENSNPVEDDETQSCFNNEQSEETVDTGGITIPAEFDLPLVP

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01022571;
90% Identity: iTF_00813974;
80% Identity: -