Basic Information

Insect: Hycleus phaleratus
Gene Symbol: -
Assembly: GCA_013841185.1
Location: JACDRP010000283.1:34105-39014[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 2.2e-05 0.0015 18.4 0.7 1 23 231 253 231 253 0.95

2 15 0.001 0.066 13.2 1.2 3 23 261 281 260 281 0.99

3 15 8.6e-05 0.0057 16.6 0.1 1 23 402 424 402 424 0.98

4 15 0.0042 0.28 11.2 0.2 1 23 430 453 430 453 0.98

5 15 2.8e-07 1.8e-05 24.4 3.0 1 23 485 507 485 507 0.98

6 15 0.0034 0.23 11.5 0.0 1 23 520 542 520 542 0.95

7 15 0.029 2 8.6 0.9 1 23 548 571 548 571 0.96

8 15 0.047 3.1 7.9 1.9 2 19 579 596 579 597 0.96

9 15 0.00019 0.013 15.5 3.6 1 23 606 628 606 628 0.97

10 15 0.0028 0.19 11.8 0.3 2 23 634 655 633 655 0.96

11 15 7.2e-06 0.00048 19.9 0.4 1 23 663 685 663 685 0.98

12 15 0.0031 0.21 11.6 0.2 3 23 693 713 691 713 0.97

13 15 9.9e-05 0.0066 16.4 0.3 1 23 719 741 719 742 0.95

14 15 0.029 1.9 8.6 1.5 1 23 756 778 756 778 0.96

15 15 0.0038 0.25 11.4 0.1 1 20 1164 1183 1164 1186 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	2.2e-05	0.0015	18.4	0.7	1	23	231	253	231	253	0.95
2	15	0.001	0.066	13.2	1.2	3	23	261	281	260	281	0.99
3	15	8.6e-05	0.0057	16.6	0.1	1	23	402	424	402	424	0.98
4	15	0.0042	0.28	11.2	0.2	1	23	430	453	430	453	0.98
5	15	2.8e-07	1.8e-05	24.4	3.0	1	23	485	507	485	507	0.98
6	15	0.0034	0.23	11.5	0.0	1	23	520	542	520	542	0.95
7	15	0.029	2	8.6	0.9	1	23	548	571	548	571	0.96
8	15	0.047	3.1	7.9	1.9	2	19	579	596	579	597	0.96
9	15	0.00019	0.013	15.5	3.6	1	23	606	628	606	628	0.97
10	15	0.0028	0.19	11.8	0.3	2	23	634	655	633	655	0.96
11	15	7.2e-06	0.00048	19.9	0.4	1	23	663	685	663	685	0.98
12	15	0.0031	0.21	11.6	0.2	3	23	693	713	691	713	0.97
13	15	9.9e-05	0.0066	16.4	0.3	1	23	719	741	719	742	0.95
14	15	0.029	1.9	8.6	1.5	1	23	756	778	756	778	0.96
15	15	0.0038	0.25	11.4	0.1	1	20	1164	1183	1164	1186	0.93

Sequence Information

Coding Sequence: ATGGAAGATAATTTCGCATTAACGTGGGAGGACCCAGCAACAGTTGTACAAAGTGAAGAAGTAATTTGTAGTATTGAAAATGAAATATTACCAAATGAATCAGAAGAATTTACTGGTGTTGTTAGTAATGAACAAACAGCCGATACTACAATAACCATTGAAGAACATGAAGAATATGAAGAAGAAATGGAAGAAATTGTCAATGATGGTGGTGTAGAAACCGAAGGCGAACTAGAGGAACAAATTGAAGAAGAAGAAGAAGAAGAAATTGTAGAAGAAGATGATGAAGAAGTTGTAATTGGTGATGATCAACAAATCGTCCAAGAAGTTGTAGAAACTGTTAATAATGAAACTGAAGTTGTACATCCAGACAATATTGTTTATTTAACTGATGATAATGTTATTGTAATGCAATCGGATGATGTTGTTGCCGATGAAATAATAGAAGAAATACCAATACAAACAAATACTAATAATGATACAATTACAACAAATGATAATAATTTTCAACAACATTTTATGGATTGTCAAGTATCAGAAGAGATTGTAACTGAACAATGGGATGAAAGTTGTCCGGAAGAAATTATTGTTGGTAGTGAAGAGGCTGTTGGTGGTACAGAAGAACAAACAAATGAAGATTTCGATATACCGTTACCAACCGATCAAGATGAATATACAGCATCAAGACCGTATCCATGTGATTTTTGTAGTCGTCGTTTTCGTAAAAAAGCCAATTTAATGAATCATATGGTAGCACATCAAACTGATCGTCCACATGGTTGTAATTTATGTGGTGTGCGTTATATACGAAAATGTGATTTAATGAATCATTTAAAAATTCATGCTTACGTACCAGAAACTGATGGTATTGAAGAAGAGGAAACACAACAATTTGATGAATCCGATCAAGAGAAACGTAATAGTAGTAGTATTATCAATAATAATAATAATAATAATAGTAATAAGAAGATACGATCGTTTGGTAAACGTAATAAAAAGAAAATTAAAGACGAATATGATAATTATGAGAATGATGAAACTGGAGCGTCCAGTTCGAAATCTTATAATTATGTTGATGAAGATATGCGTTTAATGGAAGCAATGCAGAATAATGTAAAACACGATTATAGTGAATATACTGAATATATAACTGAAAATCAAACAGTTGAAGTACGTTATCCAATCACCGATCCACGTAAACCATTCGTTTGTCAACATTGTGGCGTTGGTTTTGCTAGAGAGAAAGCATTAGCCTCCCATGCCCGTATACATGGTGGTGATAGTCCATTTGAATGTCAAAAATGTGGTGAAATGTTTTGGGATTTAGCATTAATGCGCGAACATGTACGTACAAAACATGGTAGTGATTTAGATGATTTAATTGATGATGATGAAGATGATGATAATGATGAAGATGATGATTATTCTGATGATGAAACAAAATATGGTACATTCTATTGTTCAGTTTGTGGTTTATCATTTCATCGACAAGATAATTTAAAACGCCATCAACGTGTCCATATTAAAGAAGAATATGTTAATGATCATGAATTCGGTCATATTTGTAATGTTTGTGGTGAATCATTCCCGGAAGCTTTAGATTTATTAGCACATGCTGAAGTACATGCACGTACATCGGATCATCGTTGTATGATTTGTGGTGAAGTTTGTACAGATGATCAATCGGTTGCTGTACATGTCCAAACGAAACATGGTAAAAATCTACCACCGAATACTTGTATGTTGTGCGGACGTACATGTAAAGATCGTCGTACATTATTGAAACATTCATGGGAACATTCGAAGGAGAAAAGTTTTGCATGTTCGAAATGTGCAAAAACATTTCATAATAAAGCCCGATTAAAACGCCATATGTTGTCGCATCGTAATAAAGTTGTATCGTGTGATGTATGCGGTGAAGAATTCCCAGATGGACGTTCATTAATGAACCATCGACATAGTCATAGTAGTTTAACTGGTCGACAATTTCCATGTCGGGAATGTGGTAAAACGTTCGGTTCACGTAGTTCCCAACAAATCCATATACGTATTCATACTGGTGAACGGCCATACGGTTGTCGTTTCTGTTGGAAAGCATTCGCCGATGGTGGTACATTAAGGAAACACGAACGTATCCATACTGGTGAAAAACCATACGCTTGTGCTGTATGTCCGCGTGCTTTCAATCAACGTGTCGTTTTAAGAGAACATATACGTTCACATCATTCCGGACCAGATCCGAAATACTCACATAGTGTTACACCGTATTGTTGTTCAGTATGTTCGGATATGTTTGCAACATCACAAGATTTAATTGTACATTTAATCCATCATTGTGATATGAATACAGCTATGAAGAGACAACCACAAGTTGGACCAAGAAAATATAAACGTCGACGGAAATTGAAACCGCACGAATTAGAAATGATATCGAATAAAGTTGATGATGAAATCGACGAGGAAGAGGAACAACAACAACAACAACAATACAATCAACAACAACAATATCAACCCGAACAACAACAACAACAACAAAATATCTATACAGATTCGGAGGATGATCGTGAAACACGCCGAAAAACCAACAACAAAAAAACCAAAAAATATTCACCGAAATCAAGTCTAAGTGATTCCTATAATGATTTCTATAATAGTTGTACATCAACTATAGAAAATATAAATTCGATTGTCAATTCGAAAACAACAACACCGATGAAGACGAAACGTAAAATTAAAAATGAATCAACAACAGGAACTGCTACAACTACAACAACACCAATACCGTCACGTCCGAAAATGATACACACACAAAAGACACGTGTACCCGTTGAAACTGGTGAAGATGGTAAAGTGAGACATAAAACGAAAACGTTAATCACACGTACACAACCGACGGAATTAAAATCATCAACAGGTGAACGTATACGGCCACGTACAAAGAATGTTAGTTATCATATATTGAATAATGAGAAATTACCAATTGCCACGTTCCCAGAAGACGATCAAGCCGTTGATAATTTATTAAAAGACGAATTAAGTGTAAATAATGAACAGAATAATATTACTAATAATAATAATAATAATAATAATAATGGTGATATTGTGCTGGAACCAACTGAACAAACACCAGAAGTAGCATCTGAGCAGATTATTGAAAGTGATAACGGTGCATTCCCAACGAATATCATTAAAGTAACATCGACACCGACTCAATTACATAATCTACGTCCCGGTCGGCATTTAATCGTACCGTATAATAAAGTTCGTATAGTTAAAGGCGGTATGATTGTAACGAAAAGTAAAGAGAAAGAGAAACGCAATAATGAACCGGAAAATATTCTACCAGATGTTGAAACTGATAATAATCACGATGATGGTGGTAGTGTTGGTAATAATAATCGAGATTTGGCTAAAATTAAACAGGAAATTGTGGATCCGAGTCCGTTACATGAACTAGCTGAAATATCAATGCAACATGCACAAAATATTTTTAAATGTGAAATGTGTAGTGCCGTTTTCTCAGATCGGGGTAAACTCTTAGATCATGTACCAATACATATATGA
Protein Sequence: MEDNFALTWEDPATVVQSEEVICSIENEILPNESEEFTGVVSNEQTADTTITIEEHEEYEEEMEEIVNDGGVETEGELEEQIEEEEEEEIVEEDDEEVVIGDDQQIVQEVVETVNNETEVVHPDNIVYLTDDNVIVMQSDDVVADEIIEEIPIQTNTNNDTITTNDNNFQQHFMDCQVSEEIVTEQWDESCPEEIIVGSEEAVGGTEEQTNEDFDIPLPTDQDEYTASRPYPCDFCSRRFRKKANLMNHMVAHQTDRPHGCNLCGVRYIRKCDLMNHLKIHAYVPETDGIEEEETQQFDESDQEKRNSSSIINNNNNNNSNKKIRSFGKRNKKKIKDEYDNYENDETGASSSKSYNYVDEDMRLMEAMQNNVKHDYSEYTEYITENQTVEVRYPITDPRKPFVCQHCGVGFAREKALASHARIHGGDSPFECQKCGEMFWDLALMREHVRTKHGSDLDDLIDDDEDDDNDEDDDYSDDETKYGTFYCSVCGLSFHRQDNLKRHQRVHIKEEYVNDHEFGHICNVCGESFPEALDLLAHAEVHARTSDHRCMICGEVCTDDQSVAVHVQTKHGKNLPPNTCMLCGRTCKDRRTLLKHSWEHSKEKSFACSKCAKTFHNKARLKRHMLSHRNKVVSCDVCGEEFPDGRSLMNHRHSHSSLTGRQFPCRECGKTFGSRSSQQIHIRIHTGERPYGCRFCWKAFADGGTLRKHERIHTGEKPYACAVCPRAFNQRVVLREHIRSHHSGPDPKYSHSVTPYCCSVCSDMFATSQDLIVHLIHHCDMNTAMKRQPQVGPRKYKRRRKLKPHELEMISNKVDDEIDEEEEQQQQQQYNQQQQYQPEQQQQQQNIYTDSEDDRETRRKTNNKKTKKYSPKSSLSDSYNDFYNSCTSTIENINSIVNSKTTTPMKTKRKIKNESTTGTATTTTTPIPSRPKMIHTQKTRVPVETGEDGKVRHKTKTLITRTQPTELKSSTGERIRPRTKNVSYHILNNEKLPIATFPEDDQAVDNLLKDELSVNNEQNNITNNNNNNNNNGDIVLEPTEQTPEVASEQIIESDNGAFPTNIIKVTSTPTQLHNLRPGRHLIVPYNKVRIVKGGMIVTKSKEKEKRNNEPENILPDVETDNNHDDGGSVGNNNRDLAKIKQEIVDPSPLHELAEISMQHAQNIFKCEMCSAVFSDRGKLLDHVPIHI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00987317;
90% Identity: iTF_00813878;
80% Identity: -