Basic Information

Insect: Hycleus phaleratus
Gene Symbol: -
Assembly: GCA_013841185.1
Location: JACDRP010000897.1:10824-16242[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 0.0028 0.19 11.8 4.7 1 23 149 171 149 171 0.99

2 16 0.0011 0.073 13.1 7.7 2 23 178 199 178 199 0.98

3 16 0.00017 0.011 15.6 2.2 1 23 222 244 222 244 0.97

4 16 0.0014 0.092 12.8 1.0 1 23 314 336 314 336 0.99

5 16 1.9e-06 0.00013 21.8 3.7 2 23 343 364 342 364 0.97

6 16 7e-05 0.0047 16.8 4.5 2 23 381 403 380 403 0.97

7 16 7.8e-05 0.0052 16.7 4.6 1 23 493 515 493 515 0.97

8 16 0.00094 0.063 13.3 1.1 1 23 521 544 521 544 0.92

9 16 5.2e-07 3.5e-05 23.5 1.0 1 23 549 571 549 571 0.98

10 16 2.1e-07 1.4e-05 24.8 1.9 2 23 583 604 582 604 0.96

11 16 2.5e-08 1.7e-06 27.7 1.4 1 23 611 633 611 633 0.98

12 16 1.7e-05 0.0011 18.8 1.6 3 23 645 665 643 665 0.92

13 16 0.00015 0.01 15.8 5.1 1 23 671 693 671 693 0.99

14 16 1.2e-05 0.00078 19.3 4.2 1 23 699 721 699 721 0.98

15 16 7.6e-08 5.1e-06 26.1 0.4 1 23 727 749 727 749 0.99

16 16 0.00013 0.0087 16.0 0.1 1 23 755 779 755 779 0.92

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	0.0028	0.19	11.8	4.7	1	23	149	171	149	171	0.99
2	16	0.0011	0.073	13.1	7.7	2	23	178	199	178	199	0.98
3	16	0.00017	0.011	15.6	2.2	1	23	222	244	222	244	0.97
4	16	0.0014	0.092	12.8	1.0	1	23	314	336	314	336	0.99
5	16	1.9e-06	0.00013	21.8	3.7	2	23	343	364	342	364	0.97
6	16	7e-05	0.0047	16.8	4.5	2	23	381	403	380	403	0.97
7	16	7.8e-05	0.0052	16.7	4.6	1	23	493	515	493	515	0.97
8	16	0.00094	0.063	13.3	1.1	1	23	521	544	521	544	0.92
9	16	5.2e-07	3.5e-05	23.5	1.0	1	23	549	571	549	571	0.98
10	16	2.1e-07	1.4e-05	24.8	1.9	2	23	583	604	582	604	0.96
11	16	2.5e-08	1.7e-06	27.7	1.4	1	23	611	633	611	633	0.98
12	16	1.7e-05	0.0011	18.8	1.6	3	23	645	665	643	665	0.92
13	16	0.00015	0.01	15.8	5.1	1	23	671	693	671	693	0.99
14	16	1.2e-05	0.00078	19.3	4.2	1	23	699	721	699	721	0.98
15	16	7.6e-08	5.1e-06	26.1	0.4	1	23	727	749	727	749	0.99
16	16	0.00013	0.0087	16.0	0.1	1	23	755	779	755	779	0.92

Sequence Information

Coding Sequence: ATGATTAATAAATCAACAGAATTAGCAATTGATAAAATATGTCGTTCATGTATGTGTCAAGATGATGGCAATAATATGCGAAATGTATTCGAAACGAGAGAATTCTGCGGACAAACATTACAAATTGCTGACATTTTAATGGACTGTGCATCAATTAATGTATCGAACAGTGATGGTTTACCGAAATTATTATGCGAAAATTGTGCGAATAAATTGAATTTAGTTTATGAATTTCGTAAACAATGCCAAAATTCTGATTCAACATTAAGACAATTAACCAATCAATGTCAATCTGTATCAGGAATTAAAGAGGAGAGTCTCGATATTGTTGTGCAGCCCGATTTTAATATTCCCACCTTATTTCAGGAATCAGATAGTGAGAACGAGGCGGATGATGACGATGATGATAGTATTAAAAGTACAAAATCGAAACAGAAACCGATATTTACATGTACATTTTGTCAGAAGATTTTACATACAAAAAAAGGTCTACGTATACATCAACGTCGACATACTGGTGAACGTTTACGACAATGTCATATGTGTAATGCCCAATTTACACGTACACATCATTTAGTAAGGCATATGAAATTGCATTGTAAAAAAACAAAATCAACAACAAATACACCAACAAGTACAACAACTACAAGTACAGAAACTGGACATGTTTGTAGTGAATGTGGTCAATCTTTTATGAAATTAACGAATTTATTATCGCATAAAAAAATGCATAAATCTACAATAATAAAAGAGGGTAATGACAATAAAATTGTTAGTGGTAGTGGTGATAATGATAATGATCAACAATCATCTACTACTACTACAATAAATAATACAAATAATGGTGATGATGATGATGATTATGGTGGTGGTGGTAGTGATGATTTTGACGATTATTTTAAATTAAAAACGAAATCAACAAAAAAAGATAAAGGTACATATGAATGTAAATATTGTTTAAAAATAATGACAACATTTGTTGGTTTAAAAATCCATATGAGACGGCATACCGGTGATGATCTATCAGAATGTCAATTATGTGAGAAGAGTTTCACGAAAAGTAGTCATTTAAAACGACATTTATTAACGCACGGTATTAAAGATATAGAAAAAATTAAACCAATTGAAAAGAAAATTATGGAATGTGAATTTTGTGATCGTAAATTTAAATATAAGAAGAGTTTCAATCATCATATGCAAACTGAACATGGTATGTCTGATGAAAGTGATGTACCATTAAGTACTTATGTTGCAAAGATTAGTGATAATAAAACGAAAGATAATAAAAATGATGGTGATAATATTGATGGTGGTAAAGAAGAGACAGCAACTTCTACCACAATTCAAGATGAATCTTTACAACAATCCGACGATATTAAAGATAATAATAATAGTAATAGTAGTAATAGTAGTGGTGGTTTTAGTGGTAATATTAATAATACACAACAATTAACAAAGACTGTTAATCATAAAATACATACATGTCATGTGTGTGATGCACAATTTGTACGTGCAAATCATTTAACACGCCATATGACATTACATCGTGCTATATTAATACATAAATGTGATCGTTGTGATAAAGCCTATGCAACATTAGAACATTTAGGTAAACATGTTGAAGAAGATCATATAAATAAACCATATGAATGTACAATATGTAATAAACCATTTAGTAGAGGTGAACATTTAATAAGACATTTAAAAATCCATCAAAATAATAATAACGATAAAAGTGATAATTTAAATTGTTCAATATGTCAGAAAACATTCAGTCGTTCAGATCATTTAGCACGTCATATTAAAATACATTTATTACAAGATAAACGACATGTATGTAATGATTGTGGAAAGGCATTTAATCGTTTAGATAATTTGAAAACACACCAACGTATCCATACAGGTATTAAAGATACAACAAAACTACATTTGTGTATCTATTGTGGGAAAGAATTCAATAATTCTAGCAATATGATTGTCCACATGAGACGCCATACTGGAGAACGTCCATACAAATGCAGCCAATGCGGTAAAGGTTTTCCACGATCGCACGATCTCAAATGTCACGAACGTACCCATTCCGGTGAAAAACCCTATCATTGTACACTTTGTGGAAAGTCTTTCAATAAAAGCAACAAATTGTTGCGACATACTCGGGTACATACCGGTGAACGTCCGTATGTTTGTAGTATTTGTGGTCGGGCTTTCACTCAATCAAACGATTTATCATTGCATATGCGCCGCCATACTGGCGCCCGTCCTTATGCTTGTGGCGTATGTCCAGCACGTTTCATACAATCGGGCCAATTGAAGGCGCATCGTCGTTCAACTGGTCATTGGATGGAAACCCAACCGGAATTGAAAGGTGGCCATCGTGTTGAACCAGTTACACCAGTAGTAGATCCGGCACCAATACGTTTTAAAACCCATGGTAAACAACGAAAAAGTAACGAACTTGATGATGATATTGATAATTGTGTTGATGATGAAGATAGAAAAAATACGAAATTACTTAATCAAACAATGAATATAATGAGTGGTATTAATTTACAAGGACAATCTATAATGATGGATGCATCGAAATTAGTTGAATTGCAAAATACAGGTTTTATAAATTTAATTAATACAACAACAGCTGGTACTAGTGGTGGTAATAGTGTATTAAAATACAAAACTATCGATAATAGTGATAATACAGGACAATTTAATGTTTGTGGACAGATTATTAAAACTGAAAGTAATATTGTTAAACCATTAGATGATGTTGAGAAAATACCAACAACAATAACGAATTTTCCAAGGGATACAGCAACAGTAACGTATTCGATTGTCGCACCGACTACTACATTCACAACAACAGATTATACCTATCAGAATTACGGTTAA
Protein Sequence: MINKSTELAIDKICRSCMCQDDGNNMRNVFETREFCGQTLQIADILMDCASINVSNSDGLPKLLCENCANKLNLVYEFRKQCQNSDSTLRQLTNQCQSVSGIKEESLDIVVQPDFNIPTLFQESDSENEADDDDDDSIKSTKSKQKPIFTCTFCQKILHTKKGLRIHQRRHTGERLRQCHMCNAQFTRTHHLVRHMKLHCKKTKSTTNTPTSTTTTSTETGHVCSECGQSFMKLTNLLSHKKMHKSTIIKEGNDNKIVSGSGDNDNDQQSSTTTTINNTNNGDDDDDYGGGGSDDFDDYFKLKTKSTKKDKGTYECKYCLKIMTTFVGLKIHMRRHTGDDLSECQLCEKSFTKSSHLKRHLLTHGIKDIEKIKPIEKKIMECEFCDRKFKYKKSFNHHMQTEHGMSDESDVPLSTYVAKISDNKTKDNKNDGDNIDGGKEETATSTTIQDESLQQSDDIKDNNNSNSSNSSGGFSGNINNTQQLTKTVNHKIHTCHVCDAQFVRANHLTRHMTLHRAILIHKCDRCDKAYATLEHLGKHVEEDHINKPYECTICNKPFSRGEHLIRHLKIHQNNNNDKSDNLNCSICQKTFSRSDHLARHIKIHLLQDKRHVCNDCGKAFNRLDNLKTHQRIHTGIKDTTKLHLCIYCGKEFNNSSNMIVHMRRHTGERPYKCSQCGKGFPRSHDLKCHERTHSGEKPYHCTLCGKSFNKSNKLLRHTRVHTGERPYVCSICGRAFTQSNDLSLHMRRHTGARPYACGVCPARFIQSGQLKAHRRSTGHWMETQPELKGGHRVEPVTPVVDPAPIRFKTHGKQRKSNELDDDIDNCVDDEDRKNTKLLNQTMNIMSGINLQGQSIMMDASKLVELQNTGFINLINTTTAGTSGGNSVLKYKTIDNSDNTGQFNVCGQIIKTESNIVKPLDDVEKIPTTITNFPRDTATVTYSIVAPTTTFTTTDYTYQNYG

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00813873;
90% Identity: iTF_00813873;
80% Identity: -