Hpha005939.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Hycleus phaleratus
Gene Symbol
ZNF236
Assembly
GCA_013841185.1
Location
JACDRP010000030.1:292828-298130[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 24 0.00036 0.024 14.6 2.6 1 23 114 136 114 136 0.98
2 24 0.0032 0.21 11.6 0.2 1 23 142 164 142 164 0.97
3 24 0.00013 0.0088 16.0 0.2 2 23 170 191 170 191 0.97
4 24 0.0006 0.04 13.9 0.4 1 23 197 219 197 219 0.99
5 24 0.013 0.84 9.7 1.8 2 23 230 251 229 251 0.94
6 24 4.8e-05 0.0032 17.3 4.6 1 23 275 297 275 297 0.96
7 24 2.8e-05 0.0019 18.1 1.6 1 23 303 325 303 325 0.97
8 24 0.00026 0.017 15.1 0.6 1 23 331 354 331 354 0.96
9 24 0.00083 0.055 13.4 4.6 1 23 364 387 364 387 0.97
10 24 3.7e-07 2.5e-05 24.0 0.9 1 23 450 472 450 472 0.98
11 24 5.3e-05 0.0035 17.2 1.3 1 23 478 500 478 500 0.96
12 24 1.3e-05 0.00086 19.1 0.8 1 23 506 528 506 528 0.99
13 24 0.03 2 8.5 2.0 1 23 594 616 594 616 0.96
14 24 0.003 0.2 11.7 2.2 2 23 623 645 622 645 0.94
15 24 0.00015 0.0097 15.8 2.3 1 20 650 669 650 671 0.94
16 24 0.00013 0.0083 16.0 2.8 1 23 676 698 676 698 0.99
17 24 0.00017 0.011 15.6 1.8 1 23 906 928 906 928 0.96
18 24 4e-08 2.7e-06 27.0 1.7 2 23 940 961 940 961 0.97
19 24 7.5e-07 5e-05 23.0 1.7 1 23 967 989 967 989 0.98
20 24 2.7e-05 0.0018 18.1 1.1 3 23 999 1019 998 1019 0.97
21 24 0.075 5 7.3 4.5 1 23 1025 1047 1025 1048 0.94
22 24 1.2e-05 0.00081 19.2 1.6 1 23 1199 1221 1199 1221 0.98
23 24 2.9e-05 0.0019 18.0 0.3 1 23 1227 1249 1227 1249 0.96
24 24 0.00066 0.044 13.8 3.0 1 23 1255 1278 1255 1278 0.97

Sequence Information

Coding Sequence
ATGGCCCAAGAAGACCCAATTACCGATAAATTATCAACATTGGTGACTTTACCGATACAAACCTACGATAATATCGTCCAATTACCGGATAATATACGTGTAGTTTCAGATGTTGTTATCAAACCGTTATCAGATAATTCTTTCTATATTGTCGATCCAAATGATACAACAGCCAATGGGAATTTTGTGGAGCTGTTAAATAATAACAACAATTTGATATTGTTAAATATACCAACAGATGAACCGATAAATAATCGAATCGAAGTAGATAATATTAAATCGACAGCGTTAGATGTAATTGTAGAGAAGACTAATGATAATACCAAACCGATTCCTATTTATCGTTGTACGAAATGTGATGAAGAATTCAAGAAATTTAATTTATACAAAAAGCATATAATGTGGCACAATAATATGAAGAAATTTAAATGTGATAAATGTTCGATTAGTTATAATATTGAAGAGAATTTAAATATACATACAGCTGTTCATGATGACGGTAAACCAACGTGTCCAATTTGTAAAATATCATTCCAAAGATTAGCTAGTTTAAAATCGCATCTAATCGTCCACCAAGTCGAAGAATTGTACAAATGCGAAGAGTGTCTATCAGAATTCGAGCGAGAAGAGGAGCTCAGTAAACATTTACAAACCCATTTGAGTACGCCTAAAGAAAAAGACGGAACTGTTTGTTCGTATTGTCGTGTAAAATTCACCGATTCCAACCAGTATAAAGAACACGTAGCCCATCATGTCAAAGTAAAAAAATTGATACTACCAGGCCGGCGGTCGCGAAGAAACCAAAATAATCGCGTCTACACCCATTGTTGTAGTGTTTGCCAGAAATCGTTCTCAAAAGCGTCGTTATTAGAGCGCCATTCGCGTGTACATAGCGGCGAAAAACCCTTTATTTGTCATTATTGTAATCGTGGTTTTAATCAAAAAGGCGCCCTACAGATCCATGTAACAAAACATACGGGTATTAAACCGTATCGTTGTACGTTATGTTCAGCTGAATTCTATCAAAAAGGGAATCTTCGGGTGCATGTTGAGAAGACACATACGGCACCATTACCGGGTGTTCAAACTTATAAATGTTCGCATTGTCCGTGTATTTTTAAGAAAGTTTCAAGTTTGAATGTTCATATAACAAAGACGCATGCCAATTCAAATCAATCGAACAATTCCATTGATTTAACAAATAAATTGCAACTGATTGAAACAAGTAATGATAATAACGATAATAGTGATGATAATGTTAATTATATTCGGGTAGCTGAATCGTTTTCTGATGGTACAACACGTCGTTATTTGGTTAAACAGAAACGTGTCAACAATTCGCGGATTTATATCTGTAATTATTGTTCGAAAGAATTTAAAAAACCGTCCGATCTAATAAGACACACACGGGTACATACAAGGGAGCGACCGTTTTTGTGTAAATACTGCAATATTGCATTTTCGTTAAAATCAACGCTATTGTCCCACTTGAAGACGCATTCAAATAAATGCCATTACTCGTGTCCGGTTTGTATGAAGAAATTCTCCACATCACGAGCTTTAAATTTGCATATAAAAACTCATCCGGAACGATTGACGCAACCTTTCAAATGTGATCCATGCAATAAATGGTTTAGTTCTATACAAAAAATGTTGGTACATAAAGAGAAATATCATCGACAAGACGTAGAAACACCTGCGGAACAAGCGAAAATTGATGATAATTTAAATATAGAATCGGCTGAATTACAAATAACTCCGTTATTAAATAATGAACAGTACGAATGTCAGATTTGTAGACAAGAATTTGTTAAATTGTGCGATTTTAAACAGCACGCGACTATACATTCGAACGATAAGAATTGTAAATGTGACGAATGCCAAAAATTATTTTCCACGATAGACGCCCTAAAAGAGCATAAATCAATGTATCACAATCTAAAATCGTATCATTGTAGCGATTGTAATAGGAAATTTACGAGTTTATCGCTTTTAAAACAACATAAATTAAGTCCAACTCTACCGTACAAATGTTCGTATTGTGATCGAGCTTTCTGTTCGATATTGCTGTATCGGCGCCATATTATTACGCATAAAAATAACGGGGATTTTGAGGAGAATCAAACGAATTTGACCACTATAGATCCGGATAGTATGATAAATTCCGATAATTTATCAATTAATCATAGTTGCAATGAATTCAATCACAAATACGAAGAGGATATTCAACAACAGGAAAATTCAACGTTAGATCAACAATTATACCAATTGATACCGAGTCAGATTCAAATTGCCGCAAATAATAGTAATGTTGATAATAATAAAGGTAAAGATCAAGTCCAGATTCTTATAAATTGTGATGATCTACAGTTCGGCGATAATGGGAATTTGTACGCGAAGAATGACGAGGGCACGGATTCGGCGTTTTTCAACCAATTGGACTTCCACGACGGTAACGTTTTCAATATCGACAATTTGAACAACGAATTCGAACAAATTTTAAACCCCATCATTGACAACAACAATAAAACCGAACAAATAAATGAGAATTTATTGAATAATTCGGTTGAAAATTTCTCAACTACAGTAACCAACGTTATCGTAGATCCAACCTCTTTGACGATTTTTAATAACAACAATTTAGAATCGGATGATTTAAATAAAGATAGAAAATTAGACAATGAGAAAGCCGACAAAAATAAGAATAAACGAAAATATATTTGCCCGTATTGTAAACGTACATTAACCAACAAATCGACATATTCGAAACACTTAGATAATCATATAAAACGCAATAAAAACGAACCAGTATTGCGCGTATGCAACTATTGTAATAAATCATTCAAGAAACAATCAGATTTAGTGCGACATATACGTACGCATACAGGAGAACGTCCGTTCGCTTGCGATAAATGCGATAAGAGTTTCTCATTAAAATCAACACTACTATCCCATCAACGTACACATAATCCGATCAATTCGAAGAAAATCCTGTGTACTATATGCAATTCATCATTTACATCGAAATCGAGCCTACGAGTCCATATGAGTTTGCATACCGGCATTAAAGCTTACGATTGTGTGTATTGCCCGATGAAATTTCGAACGTTATCGCACAAAAAATATCACGAAGCCTCGCATCATTACAGTGCTAATAATGAAGAAGAATTATTAAGAATCAAAAGTGCCGATGGGGATTTTGGTAATTTAATCAATGACGACCAATCGGGTGCGGTAACAACAACCGAACAACAATTGAATGAGAGCAATGATAATATTCTAGTAGTACAAGAATCATTACAACTACCGATATTGATAAATGACGATAATTTAATGAATGAAACTGTGCAATTGGAACCGAATATTCTGCAACAATGGTCGAATAATTTGCTGTTACAAGACACATTATTACAACCGTCATCTTTAATACAGTTAGACGATGGTACTTTATTGAATATCAAAACAATAAATAATGATATTGATTTGGTAACTAATCAGAATATTGTCGAAAATCAGTTGATTAATCAACAAGAAGCGCCAGCGGTACAGCCTCAACAACCACAAATTGATACAGTTAATGGTAAACCGAGGACGTTCAAATGTGATATTTGTAATAAAATGTACGCTTCGAAAGATGTGTTGAGGCGGCATCGGAAAAATCATGGCATTAACAAGAAATTTCCGTGTAATAAATGTGATAAAGGTTTCGATACGGAGGATGCTCTAGAGAAACACAGTAAACTCCATTCGGGATATCGGCCGTTTACTTGTATGCATTGTAATAATAGTTTTTCGAAACAACAGAGTCTTTCCGCACATGTGAAAAGGATACATAAAGTGCCCAATAATTCATGGAAAAACGATGTTTTCTTCACGTTTTCAACTTAG
Protein Sequence
MAQEDPITDKLSTLVTLPIQTYDNIVQLPDNIRVVSDVVIKPLSDNSFYIVDPNDTTANGNFVELLNNNNNLILLNIPTDEPINNRIEVDNIKSTALDVIVEKTNDNTKPIPIYRCTKCDEEFKKFNLYKKHIMWHNNMKKFKCDKCSISYNIEENLNIHTAVHDDGKPTCPICKISFQRLASLKSHLIVHQVEELYKCEECLSEFEREEELSKHLQTHLSTPKEKDGTVCSYCRVKFTDSNQYKEHVAHHVKVKKLILPGRRSRRNQNNRVYTHCCSVCQKSFSKASLLERHSRVHSGEKPFICHYCNRGFNQKGALQIHVTKHTGIKPYRCTLCSAEFYQKGNLRVHVEKTHTAPLPGVQTYKCSHCPCIFKKVSSLNVHITKTHANSNQSNNSIDLTNKLQLIETSNDNNDNSDDNVNYIRVAESFSDGTTRRYLVKQKRVNNSRIYICNYCSKEFKKPSDLIRHTRVHTRERPFLCKYCNIAFSLKSTLLSHLKTHSNKCHYSCPVCMKKFSTSRALNLHIKTHPERLTQPFKCDPCNKWFSSIQKMLVHKEKYHRQDVETPAEQAKIDDNLNIESAELQITPLLNNEQYECQICRQEFVKLCDFKQHATIHSNDKNCKCDECQKLFSTIDALKEHKSMYHNLKSYHCSDCNRKFTSLSLLKQHKLSPTLPYKCSYCDRAFCSILLYRRHIITHKNNGDFEENQTNLTTIDPDSMINSDNLSINHSCNEFNHKYEEDIQQQENSTLDQQLYQLIPSQIQIAANNSNVDNNKGKDQVQILINCDDLQFGDNGNLYAKNDEGTDSAFFNQLDFHDGNVFNIDNLNNEFEQILNPIIDNNNKTEQINENLLNNSVENFSTTVTNVIVDPTSLTIFNNNNLESDDLNKDRKLDNEKADKNKNKRKYICPYCKRTLTNKSTYSKHLDNHIKRNKNEPVLRVCNYCNKSFKKQSDLVRHIRTHTGERPFACDKCDKSFSLKSTLLSHQRTHNPINSKKILCTICNSSFTSKSSLRVHMSLHTGIKAYDCVYCPMKFRTLSHKKYHEASHHYSANNEEELLRIKSADGDFGNLINDDQSGAVTTTEQQLNESNDNILVVQESLQLPILINDDNLMNETVQLEPNILQQWSNNLLLQDTLLQPSSLIQLDDGTLLNIKTINNDIDLVTNQNIVENQLINQQEAPAVQPQQPQIDTVNGKPRTFKCDICNKMYASKDVLRRHRKNHGINKKFPCNKCDKGFDTEDALEKHSKLHSGYRPFTCMHCNNSFSKQQSLSAHVKRIHKVPNNSWKNDVFFTFST

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00813872;
90% Identity
iTF_00813872;
80% Identity
-