Hcic000070.1
Basic Information
- Insect
- Hycleus cichorii
- Gene Symbol
- klhl26_1
- Assembly
- GCA_013841215.1
- Location
- JACDRQ010000130.1:85970-89097[+]
Transcription Factor Domain
- TF Family
- BTB
- Domain
- zf-C2H2|ZBTB
- PFAM
- PF00651
- TF Group
- Zinc-Coordinating Group
- Description
- The BTB (for BR-C, ttk and bab) [6] or POZ (for Pox virus and Zinc finger) [1] domain is present near the N-terminus of a fraction of zinc finger (Pfam:PF00096) proteins and in proteins that contain the Pfam:PF01344 motif such as Kelch and a family of pox virus proteins. The BTB/POZ domain mediates homomeric dimerisation and in some instances heteromeric dimerisation [1]. The structure of the dimerised PLZF BTB/POZ domain has been solved and consists of a tightly intertwined homodimer. The central scaffolding of the protein is made up of a cluster of alpha-helices flanked by short beta-sheets at both the top and bottom of the molecule [2]. POZ domains from several zinc finger proteins have been shown to mediate transcriptional repression and to interact with components of histone deacetylase co-repressor complexes including N-CoR and SMRT [5, 3, 4]. The POZ or BTB domain is also known as BR-C/Ttk or ZiN.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 6.6e-35 1.3e-32 111.8 0.8 1 109 32 138 32 139 0.98 2 4 9.8 1.9e+03 -1.5 0.0 80 109 141 170 137 171 0.84 3 4 6.8 1.3e+03 -1.0 0.0 58 77 182 201 163 223 0.71 4 4 0.91 1.8e+02 1.9 0.0 53 78 234 259 222 275 0.80
Sequence Information
- Coding Sequence
- ATGACTCGAATTCAGGAGAAACTCCTCCACGATAAACCGTGGAATTCAACATTCTACCAACATCCATTCCACCAATCCACCCTGTTGGAAGGTTTGAATTCGTTGCGTGAAAAAGGCGAACTATTGGACATAACATTGATCATTGAGGAGCAAATTTTCAAAGCACACAAAGCTGTATTGTCAGCATGCAGTGATTATTTCCGTGCCATGTTCACCGATAATATGCTAGAATCACGACAACGTGAGATTCGTTTGAATGGAATCACAGCCAATGGTTTTGATCATCTATTAGAATACGCATACACATCATCGTTAGTATTGAATTTGAATAATGTCCAAGATGTATTAGAGGCGGCATCGCATGTACAAATGAATGCTGTAATTGAAGCTTGCGAACAATATTTACAAAACCAAATCGATATCGATAATTGCGTCGATATCGCTACAATCGCTGAAATTTACACATTACCGATATTGAAGACGAAAGTTTATCGTTTTATGAGCGAAAATCTATTGGAGTTTTCAAATTCGAAAGAATTCTACCGACTAACACCGCAACAATTGGAGAAATTGCTAGCCTACGATTATCCGGTTGATTGTTCCGAGGCTGATGTCTTACGCATCATTCTAGCTTGGTTCTTCCACGTGGACACTACCAAGCTAGAAGTGCGCTTTTCGTACGCTATTCGGATTATCCGGCACATTCATTTCAAAGAGATTTCGCCGCGTAAATTGCACAATATTTTAGATAAAATCTTTCAAGAGCGCAAAAACGACTGGGAATTGTATAAAATTGTATTATCCGAAGCGCGTCTGCAGAGTAATTGTTATAAAATGTTGCCAAATGTGAATTTGTTGAATTCAAGGGGAATGGAGCGTGCAATTCTAAAAATCGGCGGTTTCGGTTTGAATGGCATCACAAATGAGATCACTTATTGTTTCTATCGCGAGAAGAAATGGCGCCATCTAACGGCAATACCGCACGTTGAACAATGCAATTTCGGTACGGCGGTTTTAAACAATGAATTATACATTGTCGGCGGTTGTTTCAATCAATCATTACAAGAGATAATCCACCCGTTCGGTTTCAAATACAGTCCACGTTACGATAAATGGTCGACAATATCGCCGATGAAAATCGAACGTTGTCGCTTCTCACTGAATGTTATTGGTGGTATGCTATACGCCGTCGGTGGTTGTAGTGAAATCGATGAATTCGATACAAGCACATGTGAATGTTACGATCCAGTCTTGGACATGTGGTATATGATTAAATCATTGCCAGCTTATTTAACCCAACATGCCGCCGCTAGTTGCGAATACAACTTAGATTTGAAATTATTCATCAGTGGCGGTATGGATCGTGATACGATCCAATCAGCGATGTACTGTTACACAATCAACGAAGATAAATGGCACCATTGTGCACCAATGTTGAAAGCCCGTGCCGATCACACGATGTTAACCATCGGTGATTTCTTGTACGTGTGCGGCGGTTGGACTGAAGGTACCGACAATCGATCGCGCCTATTAGTTGATACAATCGATAAATATGATGTTAAGAATGATCAATGGAGCATTATCACGAAAATACCAACGCCCCGGTATCACGCCGGTATTGTTTGTGTTGATCGGAAAATCTATTTTATTGGCGGTTTCTACAGCGATGATATGTTCGATAAGAGTACAGCGGCTATTGAATATTATAATATTGATACGGATCAATGGACAATTGAGGAGAAATATCCACAGGATATATGGGAGCATACGTGTGCTACATTGTTTGTACCGAAATGGCGTGACGATAAGCAGGATATGGAGGTTGTATCATCAACGAATAGTACCACTTGA
- Protein Sequence
- MTRIQEKLLHDKPWNSTFYQHPFHQSTLLEGLNSLREKGELLDITLIIEEQIFKAHKAVLSACSDYFRAMFTDNMLESRQREIRLNGITANGFDHLLEYAYTSSLVLNLNNVQDVLEAASHVQMNAVIEACEQYLQNQIDIDNCVDIATIAEIYTLPILKTKVYRFMSENLLEFSNSKEFYRLTPQQLEKLLAYDYPVDCSEADVLRIILAWFFHVDTTKLEVRFSYAIRIIRHIHFKEISPRKLHNILDKIFQERKNDWELYKIVLSEARLQSNCYKMLPNVNLLNSRGMERAILKIGGFGLNGITNEITYCFYREKKWRHLTAIPHVEQCNFGTAVLNNELYIVGGCFNQSLQEIIHPFGFKYSPRYDKWSTISPMKIERCRFSLNVIGGMLYAVGGCSEIDEFDTSTCECYDPVLDMWYMIKSLPAYLTQHAAASCEYNLDLKLFISGGMDRDTIQSAMYCYTINEDKWHHCAPMLKARADHTMLTIGDFLYVCGGWTEGTDNRSRLLVDTIDKYDVKNDQWSIITKIPTPRYHAGIVCVDRKIYFIGGFYSDDMFDKSTAAIEYYNIDTDQWTIEEKYPQDIWEHTCATLFVPKWRDDKQDMEVVSSTNSTT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00841933; iTF_00814487; iTF_01566334; iTF_00929668; iTF_01366418; iTF_00987225;
- 90% Identity
- iTF_00814487;
- 80% Identity
- -