Hcul014413.1
Basic Information
- Insect
- Hybos culiciformis
- Gene Symbol
- Hr39
- Assembly
- GCA_964007475.1
- Location
- OZ023273.1:147756451-147759484[-]
Transcription Factor Domain
- TF Family
- SF-like
- Domain
- zf-C4|SF-like
- PFAM
- AnimalTFDB
- TF Group
- Zinc-Coordinating Group
- Description
- The ligand binding domain of nuclear receptor steroidogenic factor 1 (SF-1): SF-1, a member of the nuclear hormone receptor superfamily, is an essential regulator of endocrine development and function and is considered a master regulator of reproduction. Most nuclear receptors function as homodimer or heterodimers, however SF-1 binds to its target genes as a monomer, recognizing the variations of the DNA sequence motif, T/CCA AGGTCA. SF-1 functions cooperatively with other transcription factors to modulate gene expression. Phospholipids have been determined as potential ligands of SF-1. Like other members of the nuclear receptor (NR) superfamily of ligand-activated transcription factors, SF-1 has a central well conserved DNA binding domain (DBD), a variable N-terminal domain, a flexible hinge and a C-terminal ligand binding domain (LBD). [1, 8, 3, 11, 6, 5, 12, 10, 9, 2, 4, 7]
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 0.033 4.5e+02 0.6 0.6 51 128 6 80 2 121 0.61 2 4 0.39 5.3e+03 -3.0 3.8 116 160 205 248 145 291 0.44 3 4 1e-08 0.00014 22.0 0.0 1 23 392 414 392 425 0.90 4 4 2.6e-78 3.5e-74 251.2 3.8 149 408 448 714 429 714 0.88
Sequence Information
- Coding Sequence
- ATGTCCATAAATCAAGGGGAACCACCCCCATTGAATAACACAACGGTTATAGCATCGTCACAAAATCAAcagcatattaaaaataatatttcagtgACAAATATTAAATGTGAGGATTTTAATAATCAGCAATCGCAACATTCAATTATACAACACAATAATTCTCTGCTTAATGGAAATTCCATAAATGGTATTAATAATTCATGTGGAAACAGTTCTGTTCGAATATCAGTACCAAAAGTTGAAGATTCTGATGAATCGGAAtctgaattaataaatattgagCAAAATTCTAAGGTGAATCGAAGAACAAATGCTAAATCAAATGGACCCCGTCCTATGTCGTGGGAAGGAGAACTGTCTAATCAGGATGGAATTGATCATATGGAAACCGATCAGTCGTCAATTAAAGAAGAAAGAATCGTTATTGGTGGAAATGATGAAGTTAAACCTGATTTTGATCAAACGacgcaaaatttcaaaaaatttcaacaaaacgATTCTGTTACGAATATGAAATATGAACCTAGTGGATTTACTGATCCTCCTGGTGGACTTAATTCTCCACTTTTAATGCGATCGAAAATCAATTCATCACTTGTTCCTGCCAATCCGAGTCCAGATTCAGCAATTCATTCCGTTTATACACATAGTTCGCCATCTCAATCACCATTAACTTCCAGACATCCACCATATACACCATCTCTCAGTCGAAATAATAGTGATGCATCGCACAGCAGTTGTTACTCATATAGTTCAGAATTTAGTCCAACACATTCGCCGATTCAAGGAAGACATAATGTGTATCAAGCCGGAGCTTTCGGAAGTACCACAAATCCTGCCGTACATTTATACCGACCAATGCATGATGAAAGCCGGCGCAATGATGGTACAGCTGATATTCTTGTCGAAACCGATGGAATCCCTTCGCCCGGAATCTCTAGACAACAATTAATTAATAGTCCTTGTCCAATATGTGGAGATAAAATATCTGGATTTCATTATGGAATTTTCTCTTGTGAATCATGTAAAGGATTTTTCAAACGAACAGTTCAGAATCGTAAGAATTATGTCTGCGTTCGTGGAGGTCCTTGTCCTGTTACGAtatcaacaagaaaaaaatgtcCTGCTTGCAGATTTGATAAATGTCTTCAAAAAGGCATGAAATTAGAGGCCATTCGTGAAGACCGTACTCGAGGTGGAAGATCTACATATCAATGTTCGTACACCTTACCTAATCCCTTGGTTTTAAGTTCAGCAGATCATGCGGCAGCTGGACTGCTGCAATCAAACACTAGAATGAATGATAGTGTCATAAAAACTGAAGATGGTTGcaatattaataattctaataatgcATGCGGCAGTAGTAATTcgaatttaaaaactattccTCCGTTATTACAGgAAATTATGGATGTTGAACATTTATGGCAATATAATGAAAGTGAATTGTCACGGTTGAATCAACTGCCAACACAATCACATTCTAATACACAAAATTTGTCTACAAATCCACTACTGGTTGGTTTAACAAACAGTGGTGAAAATACAAATCCAGATTTAATAGCGACTTTGTGCAATGTAGCTGATCATCGCTTATATAAGATAGTTAAATGGTGTAAAAGCTTGccattattcaaaaatatttcgATCGATGATCAAATTTGTTTGTTAATAAACTCATGGTGTGAGTTGTTATTATTTTCGTGTTGTTTTCGATCTATAGCAACACCTggtgagataaaaatttctttagggAAAACAATAACGCTTGATCAAGCCAAAACAAATGGCCTACAAtccTGCGTTGAAAGAATGTTAAATTTGACTGATCATTTGAGACGTCTTCGTGTTGATCGCTATGAATATGTTGCCATGAAAGTTATCATATTATTACAATCagATACATCTGAATTACAAGAGCCAGTAAAAGTTCGGGAAAGTCAAGAGAAAGCATTACAAGCTTTACAATCTTATACATTGGCATATTATCCCGATATTCCTTCAAAATTTGGAGAATTACTATTAAGAATACCAGAATTACAAAGAACGTGTCAGcttGGTAAAGATATGTTAACTATTAAATCTAAAGATGGTGATGATTTCAGCTTGTTAATGGAATTATTACGAGGCGAACattga
- Protein Sequence
- MSINQGEPPPLNNTTVIASSQNQQHIKNNISVTNIKCEDFNNQQSQHSIIQHNNSLLNGNSINGINNSCGNSSVRISVPKVEDSDESESELINIEQNSKVNRRTNAKSNGPRPMSWEGELSNQDGIDHMETDQSSIKEERIVIGGNDEVKPDFDQTTQNFKKFQQNDSVTNMKYEPSGFTDPPGGLNSPLLMRSKINSSLVPANPSPDSAIHSVYTHSSPSQSPLTSRHPPYTPSLSRNNSDASHSSCYSYSSEFSPTHSPIQGRHNVYQAGAFGSTTNPAVHLYRPMHDESRRNDGTADILVETDGIPSPGISRQQLINSPCPICGDKISGFHYGIFSCESCKGFFKRTVQNRKNYVCVRGGPCPVTISTRKKCPACRFDKCLQKGMKLEAIREDRTRGGRSTYQCSYTLPNPLVLSSADHAAAGLLQSNTRMNDSVIKTEDGCNINNSNNACGSSNSNLKTIPPLLQEIMDVEHLWQYNESELSRLNQLPTQSHSNTQNLSTNPLLVGLTNSGENTNPDLIATLCNVADHRLYKIVKWCKSLPLFKNISIDDQICLLINSWCELLLFSCCFRSIATPGEIKISLGKTITLDQAKTNGLQSCVERMLNLTDHLRRLRVDRYEYVAMKVIILLQSDTSELQEPVKVRESQEKALQALQSYTLAYYPDIPSKFGELLLRIPELQRTCQLGKDMLTIKSKDGDDFSLLMELLRGEH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00812863;
- 90% Identity
- iTF_00812863;
- 80% Identity
- iTF_00812863;