Basic Information

Gene Symbol
SMARCC2
Assembly
GCA_017140985.1
Location
CM029359.1:9552698-9564726[+]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 6.4e-15 7.6e-12 45.3 0.2 3 44 625 666 623 668 0.95

Sequence Information

Coding Sequence
ATGTTGGCCTTGGGTCCGAAGAAGGACGGCAGTCCGAACGTGAAGTTTTTCGAGTCGCCGGAAACGCTCAACATGTTCGAGGGCGTTAGGACGTGGCTGATGAAGAACCACAAGAAGTACCTGCAAGCTGACCCGCCAACCAACAAGACGCTTGCCGCACTAGTGTTACAGTTGATTCAGTTCCAGGAAGACAATCTTGGGAAAAACGTCAGCAAACCTCCTCTCACTCGCCTGCCTATGCGTTGTTTCATGGATTTCAAACCAGGAGGCGCATTGTGCCATTTGCTGGCTACGGTGTACAAATTTAAGGTGGAACAGGGGTGGCGGAGATTCGATTTCCAGGTCAGTAAGATACCGAGCGAAGTGAAAAAAAGTCCTTCTAGAATGGACAGAAGCATTGAAATGTTTATGAACGTTGAAAAGGCTTTAATTCATGCCAAATGTTTGTCTATGCCAATAATTTTTATTCAACCAGATGTTGATAAAACAGTACAAAATCGCATTAAGGACATTATTAAAAGACACCAAGGAACTCTTACAGAAAATGAAGTAGAAGCTTCTCATATTTTGTATTCGGTTGTGGATCCATTAGAAGAAGAATATGCCAGGCCGATTTATAAAAATAAAGAACGCTGGACTCAATTACATTGGTATTATTTTCCTGACTCCCATGATTCGTGGGTCAATGCTGAACTGCCAGTTGAACCTCCTGAAGTATTATATGGCAGTCAACATCCTACTCCATGGAGGGTAACTGCATCGTGGGTCTTAGATTTGGATACTTACAATGAATGGATGAATGAAGAAGATTACGAAGTTGATGAGGCAGGCAAAAAGAAAGTTCATAAATTACGTCTATCGGTTGAAGATTTTATGAACAATGACCCTTCTGGAGGTAAAAAAAAACAAAAAAGAAAACGAACACCATCACCACCTTCTAAACCAAATAAACGTAAAAGTGGTCGTGGAAGCTCTGTTATGAGTTTAAAGAAAATTAAAGTTGAAGATGATAGTGATGATCTCACTAGAGATCTAGAAGATCCAGTTTCTGAACCCAATATTTCTGAAGTAAATGTAAATTTGTCACAAGTTAAAACGGGATCTTCTTCTTCAAAGAAAGATAGTGATTCTCAACCAATTAGAAGTGGAACTCTAATGGATTTGGATGAAGATTTAGATAAAGGAGAAGATAGTAAAAATTTTGATAATAATGCCCAAGACGGTACAAGTTGCCCTGCATCTGGCATATCGAGTACTGGTGGTACATTATCCATAGTTAAGGAAGAAGGACCAGAAGATAATGCTACTGAACAAATGCACCATATTGTTATACCAAGTTATGCTGCATGGTTTGATTATAACGCTATTCATACTGTTGAAAAACGAGCCTTACCTGAATTTTTTAATAATAAGAACAAATCAAAAACACCAGAAGTTTATTTAGCATACAGAAATTTTATGATTGATACTTATAGACTAAATCCCACTGAATACATGACAAGTACTGCAGCTAGGCGTAATCTAGCCGGTGATGTTTGTTCTATTATGAGAGTGCATGCATTTCTAGAACAATGGGGTCTTATTAACTATCAAGTTGATGCAGATAGTCGACCAACAGCAATGGGTCCACCGCCTACTTCTCATTTCCATATCCTATCTGATACACCATCTGGTTTGCAGCCTGTCAATCCTCCCAAAACTCAACAGCCTTCAGCTGCTAAAACACTTTTAGATTTAGAAAAGAAACCTCCAACAACTGATAAGGATTCCACTCAACAACCAGAACCCTTGTCTAGTTTTGGACTGAAGTTAGATCAGTATGCTAAGAAACCTGGTTTGTTACGAAATAAAACTGCTGCAGGGATGACAAGAGATTGGACTGAACAGGAAACATTGTTATTGCTTGAAGGGTTAGAAATGTATAAGGATGATTGGAACAAGGTATGTGAACATGTTGGTACTAGGACTCAAGATGAATGCATTTTGCACTTCCTTCGTTTGCCTATTGAGGATCCTTACTTAGAAGATTTTGAAACTGGTGGTGCTATAGGTCCGTTGTCATATCAACCAATACCTTTTAGTAAATCTGGGAATCCTATCATGTCAACCGTTGCTTTCTTAGCATCTGTAGTAGACCCTAGAGTTGCTGCTGCTGCAGCCAAAGCTGCCATGGAAGAATTTGCTGCTATTAGAGATGAAGTACCATCAGCGTTAATGGATGCTCACGTTAAAAACATTGAAGCTGCAACTACCGACGGGAAATATGATCCAGCTGTAGGACTTTTGCAGAGTGGAATTGCGGGCACTTATCCCGAAAAAGAAGAAGATGTTGAAAAGGAGAAAAAAGAACCGGAAGATGTCAAAGATTCATCATTGACTGCAGAGGCTGACAAAGCAACGGATAAAGAAGGAGGCTCTGAAAAAGACAAAGAACAACCCATGGATGTGGACAAAAAACCATGTGAAGACAGTGCAGCTAGTACCCAGTCAACAACTGACCGTACTACAGAAGAACCTGAACGAGTAGTTAAGGATTCTGAAGTACAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAAGCAAAACATTTAGCAGCTGTTGAAGAGCGCAAAATAAAATCTCTTGTTGCATTATTAGTCGAGACACAAATGAAAAAATTAGAGATTAAATTAAGACACTTTGAGGAATTAGAAACAACCATGGAAAGGGAACGTGAAGGCTTAGAATATCAGAGGCAACAATTAATACAAGAAAGACAACAGTTTCACTTGGAACAACTAAAGGCTGCTGAATTTAGAGCTCGACAACAAGCGCATCATAGGCTTCAAGTTGCTGGTAATACTCCTGCAGTTCAGGCTCCTGATCATGTTGCTCCCGTTTCGCCTGCTCCACCTGTGGCGACATAA
Protein Sequence
MLALGPKKDGSPNVKFFESPETLNMFEGVRTWLMKNHKKYLQADPPTNKTLAALVLQLIQFQEDNLGKNVSKPPLTRLPMRCFMDFKPGGALCHLLATVYKFKVEQGWRRFDFQVSKIPSEVKKSPSRMDRSIEMFMNVEKALIHAKCLSMPIIFIQPDVDKTVQNRIKDIIKRHQGTLTENEVEASHILYSVVDPLEEEYARPIYKNKERWTQLHWYYFPDSHDSWVNAELPVEPPEVLYGSQHPTPWRVTASWVLDLDTYNEWMNEEDYEVDEAGKKKVHKLRLSVEDFMNNDPSGGKKKQKRKRTPSPPSKPNKRKSGRGSSVMSLKKIKVEDDSDDLTRDLEDPVSEPNISEVNVNLSQVKTGSSSSKKDSDSQPIRSGTLMDLDEDLDKGEDSKNFDNNAQDGTSCPASGISSTGGTLSIVKEEGPEDNATEQMHHIVIPSYAAWFDYNAIHTVEKRALPEFFNNKNKSKTPEVYLAYRNFMIDTYRLNPTEYMTSTAARRNLAGDVCSIMRVHAFLEQWGLINYQVDADSRPTAMGPPPTSHFHILSDTPSGLQPVNPPKTQQPSAAKTLLDLEKKPPTTDKDSTQQPEPLSSFGLKLDQYAKKPGLLRNKTAAGMTRDWTEQETLLLLEGLEMYKDDWNKVCEHVGTRTQDECILHFLRLPIEDPYLEDFETGGAIGPLSYQPIPFSKSGNPIMSTVAFLASVVDPRVAAAAAKAAMEEFAAIRDEVPSALMDAHVKNIEAATTDGKYDPAVGLLQSGIAGTYPEKEEDVEKEKKEPEDVKDSSLTAEADKATDKEGGSEKDKEQPMDVDKKPCEDSAASTQSTTDRTTEEPERVVKDSEVQXXXXXXXXXXXXKAKHLAAVEERKIKSLVALLVETQMKKLEIKLRHFEELETTMEREREGLEYQRQQLIQERQQFHLEQLKAAEFRARQQAHHRLQVAGNTPAVQAPDHVAPVSPAPPVAT