Basic Information

Insect: Horisme vitalbata
Gene Symbol: -
Assembly: GCA_951804965.1
Location: OX638088.1:34955575-34958405[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 0.24 19 6.8 0.6 5 23 166 184 164 184 0.94

2 18 0.00063 0.049 15.0 3.2 1 23 188 210 188 210 0.98

3 18 4.4e-06 0.00035 21.7 1.3 2 23 220 241 220 241 0.97

4 18 1.7e-05 0.0013 19.9 3.2 1 23 247 269 247 269 0.97

5 18 2.1e-05 0.0016 19.6 2.0 2 23 275 297 275 297 0.95

6 18 2.3e-06 0.00018 22.6 0.1 1 23 303 325 303 325 0.97

7 18 3.1e-08 2.4e-06 28.5 0.3 1 23 331 353 331 353 0.98

8 18 9.2e-05 0.0072 17.6 2.6 1 23 359 381 359 381 0.97

9 18 0.00031 0.024 15.9 4.4 1 23 387 409 387 409 0.97

10 18 6.9e-06 0.00054 21.1 0.6 1 23 416 438 416 438 0.98

11 18 0.00044 0.034 15.4 6.9 1 23 444 466 444 466 0.97

12 18 9.7e-08 7.6e-06 26.9 4.2 1 23 472 494 472 494 0.99

13 18 1.7e-05 0.0013 19.9 1.7 1 23 500 522 500 522 0.98

14 18 4.2e-06 0.00033 21.8 1.0 1 23 528 550 528 550 0.96

15 18 1e-06 8e-05 23.7 2.0 1 23 556 578 556 578 0.98

16 18 2.4e-05 0.0019 19.4 4.6 1 23 584 606 584 606 0.97

17 18 3.8e-07 3e-05 25.1 1.1 1 23 612 635 612 635 0.98

18 18 3.9e-07 3.1e-05 25.0 1.8 2 23 642 663 641 663 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	0.24	19	6.8	0.6	5	23	166	184	164	184	0.94
2	18	0.00063	0.049	15.0	3.2	1	23	188	210	188	210	0.98
3	18	4.4e-06	0.00035	21.7	1.3	2	23	220	241	220	241	0.97
4	18	1.7e-05	0.0013	19.9	3.2	1	23	247	269	247	269	0.97
5	18	2.1e-05	0.0016	19.6	2.0	2	23	275	297	275	297	0.95
6	18	2.3e-06	0.00018	22.6	0.1	1	23	303	325	303	325	0.97
7	18	3.1e-08	2.4e-06	28.5	0.3	1	23	331	353	331	353	0.98
8	18	9.2e-05	0.0072	17.6	2.6	1	23	359	381	359	381	0.97
9	18	0.00031	0.024	15.9	4.4	1	23	387	409	387	409	0.97
10	18	6.9e-06	0.00054	21.1	0.6	1	23	416	438	416	438	0.98
11	18	0.00044	0.034	15.4	6.9	1	23	444	466	444	466	0.97
12	18	9.7e-08	7.6e-06	26.9	4.2	1	23	472	494	472	494	0.99
13	18	1.7e-05	0.0013	19.9	1.7	1	23	500	522	500	522	0.98
14	18	4.2e-06	0.00033	21.8	1.0	1	23	528	550	528	550	0.96
15	18	1e-06	8e-05	23.7	2.0	1	23	556	578	556	578	0.98
16	18	2.4e-05	0.0019	19.4	4.6	1	23	584	606	584	606	0.97
17	18	3.8e-07	3e-05	25.1	1.1	1	23	612	635	612	635	0.98
18	18	3.9e-07	3.1e-05	25.0	1.8	2	23	642	663	641	663	0.96

Sequence Information

Coding Sequence: ATGCATCCTTCTATGTGTAGAGTTTGTTTGTGCACCAATATGAAAATGCATCACATTGGAAATACTCATAGTGAAATGTTCGAAAGGTTTACAGGAACCCTGCTCAGCACAGGTGACAACAGGCCTACTACTGCCTGCTTCATTTGTACCGCACAGCTGCAGAGATGCCGGAGATTCTATGACATGTGCCAAAAAGCTGAAAAAATCTGCAAGGATCTTTTTCACAACAACCAACAGGTAACCCAGGAAGTGCTTGCTAAGCATAATCTAGGATGGATACACAATCTGACAATGACCCCTGTGAAGTACATGTCCACAGATGATGATGTTAACAACGAATTAGAAACTCAGGTGAAAGTAGAAGACACATCAGATGATGAATCACTGATGCACACTGGCTTCACAACGTTTGTTGAGGATGTCCAAACTGAAGCCAGTTTGCTAAATAGTGAGAAGGCAGATTTAAATGAAAGTAAGCATATTCCTGCCTCCCAAGAATGCAGTAAAACATTCAAAACTAAAGCAAAGCCGGAGAAACATAAGCTCACCCATACAAAAACATATTACTGCAGTTTCTGCAGTCAAACATTCACCAAAAAAAGGGTCCTAAAAATACATATCAAAAGCCATAAGACTCAAAATGAAAGTAAACAAAATGTCTGTAATATTTGTAACAAGACATTTGCACAAACATCCACGTTTAAAAGGCATTTGCAAATACATACTGGTGAAAAACCACATTCCTGCAGCATATGCAACGAATCATTCAGCCGGATGCACTCTTTGAAAATTCACATGCTGATTCACACTGGACAAATGCCCACTTGTGATACTTGCAGTAAAAGCTTTTCTACAAAGAGCGTTCTCACAAGACACATTATGCAAAAACACTCTGGTGGTAAGCCATTTGCTTGCAAAGTTTGCAATAAAGCATTTGCTGTAAAAGATGGTTTGAGAGCTCACATGAAGATTCATACAGGCGATAAGCCATTCATCTGCAGTACATGTGGTAAATCTTTTGTCGACAGCAGTCAACTAAAAGTGCACATAAGAGTGCATTCCGGAGAAAGACCACACACTtgtaaaatttgcaataagtcaTTTACTCAGTTAACCATTTTGAAAAGTCACATGCTGATACACACCGGAGAAAAGCCATACAATTGCAGCATATGCCAAAAATCATTTAGGCATAGAACTACTTTAGCATATCACACTCAACAGCATGGCACTGGCGATGAGCCATTCACATGCCCCATTTGCAGCACAGGATTCACTCTGAAAACTCTTCTGCGGAAACACATGGCAACACATACAGATGAGAGCTCGCATGTATGCAAGATatgtaaaaaatcatttattcatatcaTTTGTCTTAAAAAGCACATGAAGATACATACTGGAGAAAGACACTACACATGCAATATATGCGGAAAATCATTTATTCGGAACACTTGTTTAAAAAATCATATGAAAACTCATACCGGAGAGAAGCCACATACATGCGATGTTTGTAGTAAATCGTTTGCCTTGAATTCCACTCTAGCAAAACATCGAAGAATACATACCGGCGAAAAACCACATGCCTGTAACATATGCCAGAAACCGTTCAGCCTGAGCAGTGCACTGCGGAGGCACCTCAAGATACACACGGGAGAGAAGCCATACTCCTGCACCGTATGCAACAAACACTTCATTGAGAGCAGTGAGTTAAGGCGCCACATGAACATACACACCGAGAATAAACCACATTCCTGCAGCACATGCAATAAATCATTCCGGGATACGAAATCTCTGAGAACTCATATTAGACTGCACACTGGGGAAAAGCCTTATACATGCAATGTATGTGCCAAATCATTCACACAAAGTAGCAGTCTCACAACACATATTAAGAGGATTCATAGTGAAGACAAACTATGTAGCTGTAATGTATGCGGCAGATCATTCACTGAAAACAGCATGTTGATTAAGCATATGAGAATTCACTCTgaagaaaaagtaaaataa
Protein Sequence: MHPSMCRVCLCTNMKMHHIGNTHSEMFERFTGTLLSTGDNRPTTACFICTAQLQRCRRFYDMCQKAEKICKDLFHNNQQVTQEVLAKHNLGWIHNLTMTPVKYMSTDDDVNNELETQVKVEDTSDDESLMHTGFTTFVEDVQTEASLLNSEKADLNESKHIPASQECSKTFKTKAKPEKHKLTHTKTYYCSFCSQTFTKKRVLKIHIKSHKTQNESKQNVCNICNKTFAQTSTFKRHLQIHTGEKPHSCSICNESFSRMHSLKIHMLIHTGQMPTCDTCSKSFSTKSVLTRHIMQKHSGGKPFACKVCNKAFAVKDGLRAHMKIHTGDKPFICSTCGKSFVDSSQLKVHIRVHSGERPHTCKICNKSFTQLTILKSHMLIHTGEKPYNCSICQKSFRHRTTLAYHTQQHGTGDEPFTCPICSTGFTLKTLLRKHMATHTDESSHVCKICKKSFIHIICLKKHMKIHTGERHYTCNICGKSFIRNTCLKNHMKTHTGEKPHTCDVCSKSFALNSTLAKHRRIHTGEKPHACNICQKPFSLSSALRRHLKIHTGEKPYSCTVCNKHFIESSELRRHMNIHTENKPHSCSTCNKSFRDTKSLRTHIRLHTGEKPYTCNVCAKSFTQSSSLTTHIKRIHSEDKLCSCNVCGRSFTENSMLIKHMRIHSEEKVK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00811631;
90% Identity: iTF_00811631;
80% Identity: iTF_00811631;