Hvit017047.1
Basic Information
- Insect
- Horisme vitalbata
- Gene Symbol
- Hr39
- Assembly
- GCA_951804965.1
- Location
- OX638096.1:18010126-18032718[+]
Transcription Factor Domain
- TF Family
- SF-like
- Domain
- zf-C4|SF-like
- PFAM
- AnimalTFDB
- TF Group
- Zinc-Coordinating Group
- Description
- The ligand binding domain of nuclear receptor steroidogenic factor 1 (SF-1): SF-1, a member of the nuclear hormone receptor superfamily, is an essential regulator of endocrine development and function and is considered a master regulator of reproduction. Most nuclear receptors function as homodimer or heterodimers, however SF-1 binds to its target genes as a monomer, recognizing the variations of the DNA sequence motif, T/CCA AGGTCA. SF-1 functions cooperatively with other transcription factors to modulate gene expression. Phospholipids have been determined as potential ligands of SF-1. Like other members of the nuclear receptor (NR) superfamily of ligand-activated transcription factors, SF-1 has a central well conserved DNA binding domain (DBD), a variable N-terminal domain, a flexible hinge and a C-terminal ligand binding domain (LBD). [1, 8, 3, 11, 6, 5, 12, 10, 9, 2, 4, 7]
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 0.25 2.1e+03 -1.3 0.8 93 133 59 98 5 172 0.57 2 4 4 3.3e+04 -6.5 9.8 117 169 259 310 163 356 0.55 3 4 6.1e-08 0.00051 20.4 0.1 1 20 437 456 437 463 0.91 4 4 3.4e-64 2.8e-60 205.7 0.0 157 408 495 756 467 756 0.84
Sequence Information
- Coding Sequence
- ATGTCAAGCGATGCTGACGCGGTGAAAGTGGAAGGGGGACACGTGTCTGTCACTACGATCAGCATGTCGGGCCCGGAAACGAGCAATGGGCAATTCTCATACAGCTCAAGTGGAGTCCGCATCAGCGTGTCTTCGGTGCCACACGACGAAGACTCAACTGATGCTGAAATCTCCAAAATTGACTTCACACAACACCAGTACGAGGTTAACATGCGTAACAAAAAGCAGCATTCGAATTCACAATACGACAGCCAGGCCAACGATCGGGAGCGGCCCATGTCATGGGAAGGAGAGCTTTCTGATTCCGAGATGGTGATCGATACAAGTGTTAATAACGATGAAAACAGCAACTCCCTTGATCTCCAATCTTCGCGGGACTCCATAGACACTCTCCGCAACGTCACGATCAAACAGGAGCCGATGAAGAACGAGGGAGCGATGTTCCAGAGTCTCGATGACCAGAGGGTATTGGACTTGAAGTATTCGGCCCCGCTTCAGCAACATCAGAGGAGCCTTAGTATGAATAGGATACCACTGCTCTCTGACGCACCACTATCTCTGCCTAGAAGACCATCCTCTCCCACAAACAGTACTAAATCCCTCGCTCTATCCGACCAGGGGCCTATGATCATGCCGCAGACTTCGATAGGAGAGATACAGAACCTGACCATTAAGAAGGAGACGTCAGAGATGAAATGCGAACCGTCTCTGGGTATGGAGAAGTTGCTAGGCACAGCACTTGGCTCGCCCCTCACTGGCAGGATGCAGCGCGTCCAGTCAAGTGCCAGTACCGACTCGGCAGTACATTCCATGTATACACACAGTGTATACAGCAGTCCCTCTGCCAGTCCGCGCGCTACAAGGCACTATACTCCGTCTCTGTCTCGCAACAACAGCGACGCATCGCACTCTTCCTGTTACTCATACAGCTCCGAGTTCTCACCCACACATTCACCAGTACAGGGTCGCCACCCACACGTAGTTTACCGAGAAGCCACAGCCATGTTCCCCGCCTCACCAGCTCACGATGAGGACACGGAAACCGACGACAGGCTCCATCATCATCAAGGGATCAGCCGGCAGCAGCTTATAAATAGTCCATGTCCGATCTGCGGCGACAAGATCAGCGGCTTCCACTACGGGATCTTCTCGTGCGAATCCTGTAAGGGTTTCTTCAAGAGAACAGTGCAGAATAGGAAGAATTACATGTGCTTGCGAGGTAGCAACTGTCCCGTTACTGTAGCAACGCGGAAGAAGTGTCCCGCTTGTCGCTTCGACAAGTGTCTAGGATGTGGGATGAGGTTGGAAGCAATAAGAGAGGACAGAACTAGAGGCGGTCGCTCCACGTATCAATGCTCGTACACACTATCCGGGGCAGCGTCCACCGGCTCATTACTCTCCGCCCACGTGCCAACTACGCTACGGCACGCCTCAAGTTTGAACTGCGTGAACGGTCCAGGTTCATACAACAGCAGAGGGGAGTCAAGCAACAGCCGACTAACGCCTGAAATACCACCATTATTGCAAGAAATAATGGACGTGGAACACCTATGGCAGTACAACGAATCTGAACTCAATCGATTGGGGAAGTCCACTGGCGGTAGTCCTTCAGCCAACCCTCTCCTAGCCGCGAGCGGGATCACGGCACAGAACTCGAGTCCCGACTTCCTGGCAGACCTTTGTAATATCGCTGATCATCGACTCTACAAGATAGTGAAGTGGTGTAAAAGTCTGCCACTCTTCAAGAATATTTCGATAGACGATCAAATCAACTTGCTGATCAATAGCTGGTGTGAGCTGCTTGTGCTATCATGCTGCTATCGCGGAGTCAGCACTCCAGGCGAGGTGCGCGTTGGCGGTGGGAGAGGCATCACGCTGCATCAGGCCGCTAAACTTGGCTTGACGCCGTGCATAGAGAGAATGCTGAGTTTCACGGACCACCTCCGGAGGCTACGGGTCGACCGGTACGAATACGTAGCGCTGAAAGTCATTGTACTCCTCACGTCAGATGCCCCGGACTTGCGTGAGTCTGAGAAGGTACGAGCGTCGCAGGAAAAAGCGTTAGCGGCACTCCAGGCGTATATCGCCACGCACTCACCACAAACGCCGGCCAAATTCGGCGAGTTGTTGCTTAGAATACCTGAGCTGCAGCGGACTTGTCAATTCTTTATGCAAGTCGGCAAAGAAATGTTGAACCCAGCGAACAAAAACAAAGATGGCGAAGGACCAAGCTTCAATCTGCTCATGGAACTGCTACGAGGAGACCACTGA
- Protein Sequence
- MSSDADAVKVEGGHVSVTTISMSGPETSNGQFSYSSSGVRISVSSVPHDEDSTDAEISKIDFTQHQYEVNMRNKKQHSNSQYDSQANDRERPMSWEGELSDSEMVIDTSVNNDENSNSLDLQSSRDSIDTLRNVTIKQEPMKNEGAMFQSLDDQRVLDLKYSAPLQQHQRSLSMNRIPLLSDAPLSLPRRPSSPTNSTKSLALSDQGPMIMPQTSIGEIQNLTIKKETSEMKCEPSLGMEKLLGTALGSPLTGRMQRVQSSASTDSAVHSMYTHSVYSSPSASPRATRHYTPSLSRNNSDASHSSCYSYSSEFSPTHSPVQGRHPHVVYREATAMFPASPAHDEDTETDDRLHHHQGISRQQLINSPCPICGDKISGFHYGIFSCESCKGFFKRTVQNRKNYMCLRGSNCPVTVATRKKCPACRFDKCLGCGMRLEAIREDRTRGGRSTYQCSYTLSGAASTGSLLSAHVPTTLRHASSLNCVNGPGSYNSRGESSNSRLTPEIPPLLQEIMDVEHLWQYNESELNRLGKSTGGSPSANPLLAASGITAQNSSPDFLADLCNIADHRLYKIVKWCKSLPLFKNISIDDQINLLINSWCELLVLSCCYRGVSTPGEVRVGGGRGITLHQAAKLGLTPCIERMLSFTDHLRRLRVDRYEYVALKVIVLLTSDAPDLRESEKVRASQEKALAALQAYIATHSPQTPAKFGELLLRIPELQRTCQFFMQVGKEMLNPANKNKDGEGPSFNLLMELLRGDH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01161468;
- 90% Identity
- iTF_00321658;
- 80% Identity
- iTF_00811131;