Hvit004705.1
Basic Information
- Insect
- Horisme vitalbata
- Gene Symbol
- clz9
- Assembly
- GCA_951804965.1
- Location
- OX638089.1:33129235-33131589[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.4e-09 1.2e-06 28.9 0.0 4 39 28 64 27 68 0.93 2 2 2.4 1.3e+03 0.1 0.1 23 37 688 702 687 707 0.82
Sequence Information
- Coding Sequence
- ATGGTTCGAGAATATAAAAGGACGTATCGGCACGTAAGACAAGGAAAAACCTTCTTACCTTACGTATCTTATACCATACAAGACCTTGAAAATGCTGTGCGTGAAGTGAGAGAAGGACCAAGTTCAGTCCGACAAGTAGCAACCAAATATAATATACCCAAAAGCACGCTTGCCCGTAAATGTAAAAAAGATACTATTTATGAAAGTGCAGGTCACCCTACTTTATTTAATGCCACTGAAGAGAATGCCTTTCTGACGTACTGCGAAGTATTAGGCGAGTGGGGTTTCCCATTAGATGCTTTCGATTTAAGAGTCTTAGCACAGAAATACTTAAACAGGATTGGCAGGACTGTTCACATCCTTAAAGATAATCTTCCAGGGCGTGACTGGGCTCTGAGTTTCATGAAAAGACATAAAAATCGATTATCTCACAAATTTGCAACTAACATTTCTACTGAAAGAGCAAAAGTGTCGCCTGAAACAATTGATGCGTTTTTTGAGAATTATATAACCACTGTTTCAGGGGTTCCTCCTCAAAATATCATTAACTTTGATGAGACTAATCTATGTGACGATCCCGGAGCTAAGAAGTACGTGTTTAAAAGAGGCACAAAGTACCCGGAAAGAGTAGTAAATAATTCGAAGACGGCCGTAAGCTTAATGTTTACAGGAACGGCAGATGGCCAAATGTTACCCATATACGTCGTGTATAAAGCAGAACGCGTATGGCAGCCATGGATAGAGGGAGGACCTCCCGACACTAGGTACAATAGGTCAAAATCCGGGTGGTTTGATACGACATGCTTCGAAGATTGGTTCGAAACAGTGATTGTTCCATTCGCAAAAAAGAAGTCTGGAAAAAAAGTCATTATTGGCGATAATTTATCGTCGCATTTTTCTGAAAAAATTTTACAATCTTGCGAGTCGTTAAACATTTCATTCGTCTGCTTGCCGCCCAAGTCTACACATTTGATGCAACCGTTAGATGTCGCCTTTTATGggcctttaaaaaaatactggaagCAAATTTTAACAAGCTGGAAAGCGACGGCAGATGGTAGAAAGTTTAAAACTATGGCAAAGTCATGTTTTCCAAAGCTTCTTGCTCAATTATGCGATTTAATGATAGAAAAAGACGTGATATCGGCCAATTTAAAAGCGGGTTTTGAAAAGAGCGGTCTTTTCCCTGTGAACCCTGAAAGACCGAAATCGAGACTACCAAGGGCACTGGTTGCAGCTGCCGAAGTTAACGCAACTACTTCTGAAGTTGTGATTGATATTTTACAAGACATGAGAGGCTTTAAGGACACTGCTCCAAGCAAAAGAAGGAAGCGGTGCGATGTAGAACCAGGGAAAAGCATATGTGCAAAAGATTTAACTCCAAAACCAACAACGAGTACTAAAGGCAAAGGACAAGGAAAAAAAACCAAAACTGAtgttaataaagaaaatacatcGTCGTCTCAGAATGTCAACAAAAGTCAGAATCCAGCAAAATCGAGACAAAAGAAAGCTAAACGTGATTTAGACGAATCAACCAGTGTGTCTGATAATATTAGCGAGCACAGTAGTTCTGATTTAATGGATTTAGATCTGAGAAAAGAGTATGACAGTGATGATACCAACTGTTCAGAAGAACAGGCTTTCTTGATTTCCTATTTTGAAAATAGAGTTCGATCGGAAGATCCCGAACCAGGCCCTAGTGGCGAATCAGCACGATGTCGTACAGTAAAATCAAGACCAGTGCCTAGTGAGAATACATTGCCAAACCATGATGAGGAGTTAATATTAGGTTCCAATGAAAAGCCAGCACAAAGTCGTATTGAGGTGTCAATGATAAACCCGAACGAGGAAGAGCTAGCACAAAAGCCAGGGCTTGGCTCTAACCTAGAGTCAGTACAACACTATAGTGGTCAGCTAGGTCAGAACTGTGAGGAAGAGATATTAGTATGTCCACTAGCTCAAAGCTCCAACGAGCAGCCAGCACCAGACCCTATTAATCAGCTAGAACCAGAAAATAATGGGCTAGCAGGTGATTCAAATGAAAATCAAGCATTAACTTCTAATATTTATAACGTAAATGATAAAGTTTTAGTGAGGTACTATATTAAAAAGACATGGAAATATTATGTTGGCGTGATCGAAAATATTGAAAACCATTTTTACACCATTTCATTCTACAAAACTGTACGGCAAAATAATTCAGACATAATGCTTATGAAACCTAAAAGAGTCGACCGAGATATTGTACAGGATATTTCATTGGTGAAAAACATTGGTATTAAGcaaatttcatccaaaccagaaaaatatttgttgtgtaatgaagatgataagatttattttgattgttaa
- Protein Sequence
- MVREYKRTYRHVRQGKTFLPYVSYTIQDLENAVREVREGPSSVRQVATKYNIPKSTLARKCKKDTIYESAGHPTLFNATEENAFLTYCEVLGEWGFPLDAFDLRVLAQKYLNRIGRTVHILKDNLPGRDWALSFMKRHKNRLSHKFATNISTERAKVSPETIDAFFENYITTVSGVPPQNIINFDETNLCDDPGAKKYVFKRGTKYPERVVNNSKTAVSLMFTGTADGQMLPIYVVYKAERVWQPWIEGGPPDTRYNRSKSGWFDTTCFEDWFETVIVPFAKKKSGKKVIIGDNLSSHFSEKILQSCESLNISFVCLPPKSTHLMQPLDVAFYGPLKKYWKQILTSWKATADGRKFKTMAKSCFPKLLAQLCDLMIEKDVISANLKAGFEKSGLFPVNPERPKSRLPRALVAAAEVNATTSEVVIDILQDMRGFKDTAPSKRRKRCDVEPGKSICAKDLTPKPTTSTKGKGQGKKTKTDVNKENTSSSQNVNKSQNPAKSRQKKAKRDLDESTSVSDNISEHSSSDLMDLDLRKEYDSDDTNCSEEQAFLISYFENRVRSEDPEPGPSGESARCRTVKSRPVPSENTLPNHDEELILGSNEKPAQSRIEVSMINPNEEELAQKPGLGSNLESVQHYSGQLGQNCEEEILVCPLAQSSNEQPAPDPINQLEPENNGLAGDSNENQALTSNIYNVNDKVLVRYYIKKTWKYYVGVIENIENHFYTISFYKTVRQNNSDIMLMKPKRVDRDIVQDISLVKNIGIKQISSKPEKYLLCNEDDKIYFDC
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01342158;
- 90% Identity
- -
- 80% Identity
- -