Hbla001318.1
Basic Information
- Insect
- Hoplodrina blanda
- Gene Symbol
- -
- Assembly
- GCA_949316365.1
- Location
- OX438564.1:9268877-9315622[+]
Transcription Factor Domain
- TF Family
- AF-4
- Domain
- AF-4 domain
- PFAM
- PF05110
- TF Group
- Unclassified Structure
- Description
- This family consists of AF4 (Proto-oncogene AF4) and FMR2 (Fragile X syndrome) nuclear proteins. These proteins have been linked to human diseases such as acute lymphoblastic leukaemia and mental disabilities [1]. The family also contains a Drosophila AF4 protein homologue Lilliputian which contains an AT-hook domain. Lilliputian represents a novel pair-rule gene that acts in cytoskeleton regulation, segmentation and morphogenesis in Drosophila [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.9e-13 1e-08 35.5 0.3 4 114 83 193 81 226 0.72 2 2 9.1e-06 0.24 11.2 0.2 346 385 226 265 208 298 0.75
Sequence Information
- Coding Sequence
- ATGGATGCGTTAAGGTGGACTGCGTCGTCGAAGACAGCCCAGAAAGAGTGGCTCAGGCGAGTGAATCTGGGCGCGTACCACGATGACTGGTTCTACCTAGCGCGGGAAAACAGATTCTCGAATGGCTCCTTTTCCCAGCAATGGGACAACATAAGGCTacgaataaaaaaGTACGACAAGTGGGACCGGGACAGGGGCGGGGGGAGCGGCGGCGGGGGCGGCGGGTCAGGTGCGTGGGCCGGCCGCGACCGCGAACGCGACCGCGAGCGCGAGCGACAGGCGCGCGCGCACCAGATGTCGCAGGCGCACGCCGCCGAGCCCGACGCATCGTCGCTCTTCCCGGCGCCGTTCAGGGTGTCAGGCAGGCAGGATCGCGTGAGTCAGCAGATCCAGACCAAGCTCGGCGACTATCACCTCGCGCAGTGGTTCATCGATGACCCCAGCAAATCCATTGGGATCTGTGCTGAACCTCCAAGTCCTGCACCATGCCCACCATCTCGGCGAGAGAGCGAGTTCAAGAAGCCGTCTCACGCCCCACAGAACGGCGTCCGCCATCACCGCCCCCATATCCCACACAACAAGAGCGACGGTTCCGGTTCAACGGGAGCCCCGCACAGACCGCCTCCAATCAGGATACCCAACGGTATCCAGTCACAGAATGCTATCGATAGCAGTCAACCGCCAATAGAAAGTATTTTAAAGgAGATGAAGTCTCTACCGACGCCGTTGTCAGTGATTGCTGCGACGCCGAGGAAGGAGTTGGAGAACAAATTTATCTTCAACCCTTACACAAATAAGGTGAGGCAGACGTTTCAGTACTTACGTAGTAAAGCTCAGGTCATACGGTTCCACGTGGCAACAGCCGTCAAGTGCTTGCCGTCTGAACTTAGCCTTTACTTCAATAACTAG
- Protein Sequence
- MDALRWTASSKTAQKEWLRRVNLGAYHDDWFYLARENRFSNGSFSQQWDNIRLRIKKYDKWDRDRGGGSGGGGGGSGAWAGRDRERDRERERQARAHQMSQAHAAEPDASSLFPAPFRVSGRQDRVSQQIQTKLGDYHLAQWFIDDPSKSIGICAEPPSPAPCPPSRRESEFKKPSHAPQNGVRHHRPHIPHNKSDGSGSTGAPHRPPPIRIPNGIQSQNAIDSSQPPIESILKEMKSLPTPLSVIAATPRKELENKFIFNPYTNKVRQTFQYLRSKAQVIRFHVATAVKCLPSELSLYFNN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -