Hamb021842.1
Basic Information
- Insect
- Hoplodrina ambigua
- Gene Symbol
- dmrta2
- Assembly
- GCA_949774945.1
- Location
- OX458987.1:11171176-11177380[-]
Transcription Factor Domain
- TF Family
- DM
- Domain
- DM domain
- PFAM
- PF00751
- TF Group
- Zinc-Coordinating Group
- Description
- The DM domain is named after dsx and mab-3 [2]. dsx contains a single amino-terminal DM domain, whereas mab-3 contains two amino-terminal domains. The DM domain has a pattern of conserved zinc chelating residues C2H2C4 [1]. The dsx DM domain has been shown to dimerise and bind palindromic DNA [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.1e-28 1.4e-24 86.3 10.8 1 47 36 82 36 82 0.99
Sequence Information
- Coding Sequence
- ATGGAAATGTCTCTCCCGAACGGTGTCGATGTCTCCCAGTTGGTGCAGCACCCGGTGCTGGCCGCGTTGCCGCCTTTCTTCCTCCGAGCTTCGGAAAGATATCAGCGGACGCCCAAGTGTGCGCGCTGCAGGAACCACGGCGTGGTCTCCGCGCTGAAGGGGCACAAGCGCTACTGTCGGTGGCGCGACTGCGTATGCGCCAAGTGCACGCTGATCGCCGAGCGCCAGAGGGTTATGGCTGCACAGGTGGCGCTGCGACGCCAGCAGGCGCAGGAGGAGAACGAGGCGCGGGAGCTGAACCTGCTGTACGCCAGCCAGACGTCCACCGCGCCGCACCACTACACCGACATGCCGGATGAGTCGCCAGGTGAGCCAGTGATATGA
- Protein Sequence
- MEMSLPNGVDVSQLVQHPVLAALPPFFLRASERYQRTPKCARCRNHGVVSALKGHKRYCRWRDCVCAKCTLIAERQRVMAAQVALRRQQAQEENEARELNLLYASQTSTAPHHYTDMPDESPGEPVI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01076545; iTF_01026242; iTF_00111715; iTF_00677667; iTF_00300263; iTF_00017384; iTF_00973833; iTF_00040865; iTF_01063810; iTF_01085284; iTF_00771975; iTF_00301224; iTF_01064712; iTF_01533097; iTF_00711914; iTF_00851851; iTF_00951884; iTF_00120557; iTF_00928753; iTF_00685490; iTF_00952757; iTF_00425437; iTF_01534879; iTF_01197769; iTF_00823083; iTF_01152204; iTF_01030286; iTF_01117262; iTF_00026896; iTF_00450162; iTF_01403474; iTF_01501167; iTF_00275313; iTF_01336894; iTF_01425110; iTF_01028343; iTF_00707000; iTF_01425976; iTF_00888313; iTF_01031193; iTF_01118361; iTF_01192761; iTF_00383706; iTF_01073659; iTF_00043550; iTF_00236670; iTF_00345854; iTF_01075488;
- 90% Identity
- iTF_00040865; iTF_00823937; iTF_00441538; iTF_00157249; iTF_01026242; iTF_01197769; iTF_01031193; iTF_00111715; iTF_00888313; iTF_00709283; iTF_01437091; iTF_00300263; iTF_00973833; iTF_01538794; iTF_00823083; iTF_01491981; iTF_01264659; iTF_01075488; iTF_00125166; iTF_01030286; iTF_01117262; iTF_00928753; iTF_01063810; iTF_00771975; iTF_01064712; iTF_00711914; iTF_00951884; iTF_00120557; iTF_00685490; iTF_00952757; iTF_00425437; iTF_01534879; iTF_00839474; iTF_01042723; iTF_01403474; iTF_00026896; iTF_00932597; iTF_01028343; iTF_01360664; iTF_01118361; iTF_00171802; iTF_00935770; iTF_01182940; iTF_00858590; iTF_00281375;
- 80% Identity
- -