Hamb024265.1
Basic Information
- Insect
- Hoplodrina ambigua
- Gene Symbol
- ARID5B
- Assembly
- GCA_949774945.1
- Location
- OX458993.1:5892214-5909250[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.6e-13 3.9e-10 40.6 0.1 3 89 244 317 242 317 0.89
Sequence Information
- Coding Sequence
- ATGAGGACTTTCATCGCGAAAAATAATAAGGCCCCCAAATTTTTGTCCAGGGCCCCTACTAATTCCCAGTCCGGCCCTGCTGATGCTGATGAAGTACTGGCCATCAGCGACAAAGTAGTACTGCGGGCAGATGACCTTCTCTCCTGGATGTGCGTGGGCACCGAGTGGCGGTGGGGGCTGCGGGCAGTGTGGCGCGGCGCCTGCGCACCCCCCGCCGACATGCCGCGACACGCGCCGCTCACGCACACCAAGCTGGACTTCAGCGATGTTGATACGGAGAAGAGTTCAATTGTGGTGGACGCCGACGCTCCAGGCGTGGTGGTCTTCTCCTACCCTCGGTACTGTCGCTACAGGGCGCTCATAGCCCGCCTCGAAGGCATCCAGGCGTCATGGCTGCGGGACTCCTTGGTCGCAGCCCTAGGAGGATATGCGGCGCCCACCAGTAACACCAGGATACTGTACTGCAAGGACACGTTCGAGTACCCCGAGCTGGAGGGGCACGAGTTCGTGTGCAACCACCTGGCGCCGCGGCTCAAGGGGCGGccgcgcgggcggcggcggcgcgcgcacTCGCCCGAGCGCCCCGCCGAGCGCTCCGACCGCTCCGACGACGACGAGCCCGGCGCAGACCCGCCCACCCCCCGCCGCCTCTCCCTGCGCAACGGTGCCCCCCCACAGAGcgaggaagaagaagaagaatacaaGAGAATAGAACAGACGCCAGAAGACAGAGCCTTCTTGCAGCAGCTGAAGATGTTCTACAAGACGAAGAGTGAGCCGTTCAAGAGTGGACACACTTTGAAGCATTTGTCGCTGCGCGCGCTGTACCTGTCGGTGCTGTCGCGCGGCGGCTACGAGGCGGTGTGCCGCCACAAGCTGTGGCGCGCGCTCGCCCGCGACCAGCCCGCGCGCACGCGCCGCCACTACGAGCGATTCCTCCTGCCCTTCGAGAACCACGAACGGAGAAACGGCTCCTCATTCAAGCTCAACGGAAAGCTAGACGTGGAGCCTCACACCATCGCCACCATCGATGTCACAGACTCCCCCCTCCGCGACGACGACGTCAAGGTACTCCGCACCCCCTCCCCCAGCCCGGACAACTACGACAAACTCGGAAACCCGGATATAGACAGCGAGACGGGTGAAATCACTACCAAAGATGATATTATAGTCAAGAACGCAGAAGAACTTAATAGAGAATTTCTAGATTCTCTGCCGAAGGAGGAGAAGATGGTTAAAATATCCGTGAAACCGGTTGAGAAGCTGATTGAACCGGGTAAAGTGTTTGAGGGTAATGCGGATGGTTCTAAACTAGGGGAGGGCCAGAAAGGGGAGGGGAGAGAGTTTAGTCACAGCTATTTGAGTGATATGCAGAAATTTAGTATGGGAGCAGAGTCCCTATCGTCTCGTGCGACACCTCTGAACGGGCACGCTGCGCCCGCGCCTACAGACCTTAAGGCCCGGCCGGCAGGTCGCAGCTCGCTGCGCGCGGTGCGCGTGAAGCCCGCGCGGCCGCAGCATGCGCACGCGCAGCAGCTCGCGCCCGCCAACACGCCTCCTCACCCCCTGCGGCCGGAGTCGGCCCCGTCGCCGtccgggggcgcggggggcgcgccGGTCACTAACTTCGGCATCCACCACCCGCCCCCGCACAGCGCTCACGTCGACGATGACATCGTTGAGGTCCCATACAAACCGAAGACCCCAGAAATAATCGACCTGGACGAGTACCCGGAAAGCCCTCAAGCGGTGAAGAAGAAGAAACTCGACATCCTCAAAGAGCGAGGACTCGAAGTCACCGCCCTGCCCCCGCCATGGCAGGGGGTCGGCCCCCACATCATGACCCCGCCCATGATCCTCAACCCAGCAGTACAGCACCAGATTATGACGCAGGCGCAACTATTTCAAATGTACAACATCATCCCGCAGAACTACGCCAACGGGATCCAGCCACCGAAAGTCATACAAGCGTCTTCTATCTTCGGGAATACTGGACCAGAGAAGACGGTCTACGGAAACCCGAAAGACCCCTTCATGCCTCCCCCCCATGTGCTTCACGGGGTGCCAGTAAAACCTTTGAGAACTGCACCCCCTACTCCCACACCCCAAGACATTCTAGACCTGACCTGCAAGTCCTCGAGCCCTCCACCACAGAAGCCAGCAGTGGAAATAGTAAGGGTACCCCCCTCCCCTTCTCCTACTGCACAGAATTTAACAAAGAATTACACTTTAGTCGACGGAAAAGCTGTTGTGGGATCGAATTTAGAAATCACTTTAGTCAATAAGGCTTCGAGTCCTGGAAAAAACCGACCTCCGCAGAAAAGGTCGAGTAACGGGAAGTTTATGTCAGCTAAAACGCCTACCCCGCCTAAGGACGCCTACCCAAAGTACGCGTCGCCTAGCAGCGCCCAAAAGAAACCCCCCATCAACATACCTAGTTACCAAATCCGGGAAGACTCCCCTACCCAGAGTCAGGTCCTTCAGAACGCGATGAAAAATCAGAATCTAGCTCAAATTATGGATTTGCAAAAGTCTGCGGTTCCTATGACTTCATTCATGGACCCTTACGTGGCTCTGTACAGCAGTTTAGCGGGTCAGATGGACCAGCGCCAGCTGGCGATGTACAGGGACCTCATGACCAATCAATTTCGTTACCCAGGACTGTTGAATCTTGGCGTGGCGACTCCTACAACGAAAAATTAG
- Protein Sequence
- MRTFIAKNNKAPKFLSRAPTNSQSGPADADEVLAISDKVVLRADDLLSWMCVGTEWRWGLRAVWRGACAPPADMPRHAPLTHTKLDFSDVDTEKSSIVVDADAPGVVVFSYPRYCRYRALIARLEGIQASWLRDSLVAALGGYAAPTSNTRILYCKDTFEYPELEGHEFVCNHLAPRLKGRPRGRRRRAHSPERPAERSDRSDDDEPGADPPTPRRLSLRNGAPPQSEEEEEEYKRIEQTPEDRAFLQQLKMFYKTKSEPFKSGHTLKHLSLRALYLSVLSRGGYEAVCRHKLWRALARDQPARTRRHYERFLLPFENHERRNGSSFKLNGKLDVEPHTIATIDVTDSPLRDDDVKVLRTPSPSPDNYDKLGNPDIDSETGEITTKDDIIVKNAEELNREFLDSLPKEEKMVKISVKPVEKLIEPGKVFEGNADGSKLGEGQKGEGREFSHSYLSDMQKFSMGAESLSSRATPLNGHAAPAPTDLKARPAGRSSLRAVRVKPARPQHAHAQQLAPANTPPHPLRPESAPSPSGGAGGAPVTNFGIHHPPPHSAHVDDDIVEVPYKPKTPEIIDLDEYPESPQAVKKKKLDILKERGLEVTALPPPWQGVGPHIMTPPMILNPAVQHQIMTQAQLFQMYNIIPQNYANGIQPPKVIQASSIFGNTGPEKTVYGNPKDPFMPPPHVLHGVPVKPLRTAPPTPTPQDILDLTCKSSSPPPQKPAVEIVRVPPSPSPTAQNLTKNYTLVDGKAVVGSNLEITLVNKASSPGKNRPPQKRSSNGKFMSAKTPTPPKDAYPKYASPSSAQKKPPINIPSYQIREDSPTQSQVLQNAMKNQNLAQIMDLQKSAVPMTSFMDPYVALYSSLAGQMDQRQLAMYRDLMTNQFRYPGLLNLGVATPTTKN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00374957;
- 90% Identity
- iTF_00809842; iTF_00273396; iTF_00274233;
- 80% Identity
- -