Basic Information

Gene Symbol
ARID5B
Assembly
GCA_947462355.1
Location
OX381701.1:6401366-6410612[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 5.9e-14 9.9e-11 41.9 0.1 3 89 238 311 236 311 0.90

Sequence Information

Coding Sequence
ATGGAACCAGATCCCGATGCAGATGCGGCTCTGCGGAAACGGATCCAGGACGAAGTACTGGCTATCAGCGACAAGGTAGTGTTGCGGGCAGACGACCTCCTCTCCTGGATGTGCGTGGGCACCGAGTGGCGCTGGGGGCTGCGCGCCGTGTGGCGCGGCGCGTGCGCACCGCCCGCCGACGAGCCGCGACACGCGCCGCTCACGCACACCAAGTTGGACTTCAGTGATGTTGATACGGAGAAAAGTTCTATCGTGGTGGACGCCGAGGCGCCTGGCGTGGTGGTCTTCTCGTACCCTCGGTACTGCCGGTACCGGGCGCTTATAGCCCGGCTCGAGGGCATCCAGGCGTCATGGCTGCGGGACTCCTTGGTCGCAGCTTTAGGAGGGTACGCGGCGCCGACTAGTAACACCAGGATACTATACTGTAAGGACACCTTCGAGTACCCCGAGCTGGAGGGGCACGAGTTCGTGTGCAACCACCTGGCGCCGCGGCTGAAGGGGCGGCCGCGCGGGCGGCGGCGGCGCGCGCACTCGCCGGACCGCGCGCACTCGCCCGGCCGCGCGCGCCTCGAGCGCTCCGACCGCTCCGAGGACGACGAGCCGGCCGCCGACCCGCCGACCCCCCGCCGCCTCTCGCTGCGCAACGGCGCTCCCCCCCAGAGCGACGAGGAGGAAGAGGAGTACAAAAGAATAGAGCAGACTCCGGAAGACCGAGCCTTCCTGCAGCAGCTGAAGATGTTCTACAAGACCAAGAGTGAGCCGTTCAAGAGTGGACACACTTTGAAGCATTTATCCCTGCGCGCGCTGTACACGTCGGTGCTGGCGCGCGGCGGCTACGAGGCAGTCTGCCGACACAAGCTGTGGCGCGCGCTCGCACGCGAACAGCCCGCGCGCACGCGGAGACACTACGAGCGATTCCTCCTACCCTTCGAGAACCACGAACGAAGAAACGGCTCCTCATTCAAGCTGAACGGAAAGTTGGACGTGGAGCCCCACACCATCGCCACCATCGACGTCACCGACTCCCCCCTCCGGGACGACGACGTCAAGGTACTGCGCACCCCCTCCCCCGCACCGGACAGCTACGACAAGCCGGACGTGGACAGCGAGACGGGAGAAATCACTACCAAAGAGGATATAATAGTCAAAAATGCAGAGGAATTAAACAGAGAGTTCTTGGACTCTCTCCCGAAGGAGGAGAAGACCGTGAAGATTTCTGTAAAGCCGGTGGAGAAGCTGATAGAGCCGGGGAAGGTGTTTGAGGGTGGCGTGGATGTTACTAAGCTGGGAGAGGGTCAGAAGGGGGAGGCGAGGGAGTTTAGTCACAGCTATTTGAGTGATATGCAGAAATTTGGTATGGGAGCAGAGTCCCTATCGTCTCGCGCGACCCCCCTGAACGGCCACGCCGCGCCCGCACCCACCGACCTCAAGTCCCGGCCGGCGGGCCGCAGCTCGCTGCGCGCGGTGCGCGTGAAGCCGGCGCGCCCGCACCACGCGCACCACGCGCACGCACACCACGCGCACGCCGCGCACGCGCCGCACGCGCCGCACGCCGCGCACGGGCAGCACACGCCGCACCTCACGCCCGCCAGCACGCCTCCTCACCCGCTGCGGCCGGAGTCGGCGCCGTCTCCCTCCGGGGGGGCGCCCGTCACTAACTTCGGCATCCACCACCCGCCGCCACACAACGCGCACATCGACGATGATATCGTTGAGGTTCCCTACAAACCGAAGACCCCAGAAATAATCGACCTGGACGAGTACCCAGAAAGCCCTCAAGCGGTGAAGAAGAAGAAACTTGACATCCTCAAGGAGCGAGGACTCGAAGTCACCGCCCTGCCCCCGCCGTGGCAGGGGGTCGGGCCCCACATGATGACCCCGCCCATGATCCTCAACCCGGCAGTACAGCATCAGATCATGACGCAGGCGCAACTCTTCCAGATGTACAACATTATTCCGCCACAGAACTATGCCAACGGAATCCAGCCGCCGAAAGTCATACAAGCATCCTCGATCTTCGGGAGTACAGGACCCGAGAAGACTGTGTATGGAAACCCGAAGGACCCCTTTATGCCACCCCCGCATGTGTTACACGGGGTACCCGTCAAACCGCTGAGAACTGCCCCCCCTACGCCCACTCCTCAAGACATACTCGACCTGACCTGCAAGTCTTCGAGCCCTCCTCCACAGAAGCCAGCCGTCGAGATAGTGAGGGTACCGCCCTCCCCCTCCCCTACTGCACAGAATTTAACAAAGAATTATACTCTAGTAGATGGGAAGGCAGTCGTGGGATCGAATTTAGAAATCACTCTAGTTAATAAAGCTTCGAGTCCTGGCAAAAACCGGCCTCCGCAGAAGAGGTCAAGCAACGGGAAGTTCATGTCGGCCAAAACGCCTACCCCGCCTAAAGATTACCCTAAATACGCGTCGCCTAGCAGCGCGCAGAAGAAACCACCCATCAACATCCCTAGCTACCAAATCAGGGAGGACCACTCCCCCACCCAGAGCCAAGTCCTGCAAAACGCAATGAAAAATCAGAATCTAGCTCAAATAGTGGATTTTCAGAAGTCCTCGGTTCCTATGACGTCTTTCATGGATCCTTACGTGGCTCTTTATAGCAGTTTAGCGGGGCAGATGGACCAGCGCCAGTTGGCGATGTACCGCGACCTGATGACCAATCAGTTCAGGTACCCAGGGCTGCTGAACCTGGGTGTGGCGACACCTACAACGAAAAATTAG
Protein Sequence
MEPDPDADAALRKRIQDEVLAISDKVVLRADDLLSWMCVGTEWRWGLRAVWRGACAPPADEPRHAPLTHTKLDFSDVDTEKSSIVVDAEAPGVVVFSYPRYCRYRALIARLEGIQASWLRDSLVAALGGYAAPTSNTRILYCKDTFEYPELEGHEFVCNHLAPRLKGRPRGRRRRAHSPDRAHSPGRARLERSDRSEDDEPAADPPTPRRLSLRNGAPPQSDEEEEEYKRIEQTPEDRAFLQQLKMFYKTKSEPFKSGHTLKHLSLRALYTSVLARGGYEAVCRHKLWRALAREQPARTRRHYERFLLPFENHERRNGSSFKLNGKLDVEPHTIATIDVTDSPLRDDDVKVLRTPSPAPDSYDKPDVDSETGEITTKEDIIVKNAEELNREFLDSLPKEEKTVKISVKPVEKLIEPGKVFEGGVDVTKLGEGQKGEAREFSHSYLSDMQKFGMGAESLSSRATPLNGHAAPAPTDLKSRPAGRSSLRAVRVKPARPHHAHHAHAHHAHAAHAPHAPHAAHGQHTPHLTPASTPPHPLRPESAPSPSGGAPVTNFGIHHPPPHNAHIDDDIVEVPYKPKTPEIIDLDEYPESPQAVKKKKLDILKERGLEVTALPPPWQGVGPHMMTPPMILNPAVQHQIMTQAQLFQMYNIIPPQNYANGIQPPKVIQASSIFGSTGPEKTVYGNPKDPFMPPPHVLHGVPVKPLRTAPPTPTPQDILDLTCKSSSPPPQKPAVEIVRVPPSPSPTAQNLTKNYTLVDGKAVVGSNLEITLVNKASSPGKNRPPQKRSSNGKFMSAKTPTPPKDYPKYASPSSAQKKPPINIPSYQIREDHSPTQSQVLQNAMKNQNLAQIVDFQKSSVPMTSFMDPYVALYSSLAGQMDQRQLAMYRDLMTNQFRYPGLLNLGVATPTTKN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00374957;
90% Identity
iTF_00808887;
80% Identity
-