Hvit002171.1
Basic Information
- Insect
- Homalodisca vitripennis
- Gene Symbol
- retn
- Assembly
- None
- Location
- KK961557.1:470372-483365[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.7e-21 6.9e-18 65.7 0.0 11 89 39 115 27 115 0.91 2 2 1.3 5.5e+03 -1.3 0.0 18 38 235 260 206 264 0.68
Sequence Information
- Coding Sequence
- ATGGCGGAGGCGGCTACAGATACGGCGGGAGTGAGCGCTGATAATTACCAGTTACGGCTGGAACTGTCCCGTCCTTCTCGGAAACTGCGCGAACACTGTACGCATGCGCCTTCTCGGGTCTACCGACGCAACGGCACTCCCATAAATCGACTGCCCATCATGGCCAAATCAGTGCTGGACCTGTTTGAGCTCTATAACCTAGTGATACAAAGAGGTGGACTGGTGGACGTCATCAACAAGAAGCTTTGGCAAGAAATCATCAAAGGTCTGCACCTGCCATCTTCCATCACATCAGCTGCCTTCACGCTGCGAACACAATACATGAAGTACCTGTACCCATACGAGTGCGAGAAGCGAAGACTCAGCACGCCTGGGGAACTGCAGGCTGCGATAGATGGCAATAGACGTGAGGGCAGACGTGGCAGCTACGGTACCTATGCTGAGATGATGCAGAGAAGTCCTTCGCAGATGTCACCTCTGAGTTTGGTGACCGCCGCCAGACCTCAAGTAAACGGTTCGGCCGCCCATCATCCCACCAACAACAACCATCTGCCTCACCAGGCACTCATACCACCCGCCCTCGCAGGTCATGGAGCTGCTATTCCTCCAGCTGAGTTCGAAGCACGGATGGTAGAATATGTGAAACTTCTGAACAAGGAATTGCGAACATCAGGAGCCACCCCTCCCAACCACAGGCAAAGTTCACCACCAACATCACCGCCAGAGACCGCCTTGGCAGCGTTTGACATGTCTCGTCTCACCCTCTGGAACCTCTATCATAACCAGACATCCCCTACGGAGCCTCAGAAGGAACCTATTAACTTGGAGAAGCGAGAGGACCCAGTGGGACCTCCCCCACTCAAGCGCCACCAACCTGACTCTGAGGAGCCCAAAGTCACCGGCACGCACATCAAAATCTCCAGTAGAAATGATGGGCGCGGGGGTGGAGATAACTCTCTGGTAGTCAGTATGGACATCAACGGCACCATGTATCAGGGAGTGCTGTTCGCGCAGACGACGCGCAACTCAAGACTGCCTTCGTAA
- Protein Sequence
- MAEAATDTAGVSADNYQLRLELSRPSRKLREHCTHAPSRVYRRNGTPINRLPIMAKSVLDLFELYNLVIQRGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTQYMKYLYPYECEKRRLSTPGELQAAIDGNRREGRRGSYGTYAEMMQRSPSQMSPLSLVTAARPQVNGSAAHHPTNNNHLPHQALIPPALAGHGAAIPPAEFEARMVEYVKLLNKELRTSGATPPNHRQSSPPTSPPETALAAFDMSRLTLWNLYHNQTSPTEPQKEPINLEKREDPVGPPPLKRHQPDSEEPKVTGTHIKISSRNDGRGGGDNSLVVSMDINGTMYQGVLFAQTTRNSRLPS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00139018;
- 90% Identity
- -
- 80% Identity
- -