Hvit021647.1
Basic Information
- Insect
- Homalodisca vitripennis
- Gene Symbol
- -
- Assembly
- None
- Location
- KK962055.1:210986-230661[+]
Transcription Factor Domain
- TF Family
- RHD
- Domain
- RHD domain
- PFAM
- PF00554
- TF Group
- Beta-Scaffold Factors
- Description
- Proteins containing the Rel homology domain (RHD) are eukaryotic transcription factors. The RHD is composed of two structural domains. This is the N-terminal DNA-binding domain that is similar to that found in P53. The C-terminal domain has an immunoglobulin-like fold (See PF16179) that functions as a dimerisation domain [1-2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.1e-05 0.26 12.1 0.0 1 30 14 43 14 54 0.85 2 2 1.5e-10 1.2e-06 29.4 0.1 30 121 64 161 56 177 0.75
Sequence Information
- Coding Sequence
- ATGGGTCCTGTTGGAGGAGACAAACCACAAGAGCCTTACTTACAGATTGTCAGCCAACCACAAAGTAGTCTGAGTTTTCGGTATAAAACAGAAATGAAGAAGATTTACGGTGCGATCAGGTCTGAGGAGGACCGTTTATCATCATCAAGTGCCGCTGACTCTCCGCCTTGCCTGTCATCAATAAGTAATAGTTCCCTCAGTTATCCAGACACTGCTACTACAAATAGCCTCTGCAATTACAACCCCAGGCCGAGCGAGACCATCCCCATCATCCGATGTACACTTTGTACATCTGAGGGAAAGCTCCATGTCCACCGTCTGGTGTCCAAGCAGAAAAGAGAGGAAGTAGATGATCCACATGACATCCAAGTCACGGCACGTGACTTTACAGTTCGtttttctcaGTTGGCAATCGTACCTACCAAAAAAAAATGTCAAGTAAAAGTTCTTCGTAAAAAGATACAAGAACATAAGAGAAGAATGTTCAATGATAAAAGAAGGAATGATTCGTTTCTTCTTGATGAAGGAttacatatattattatatttcaattacataacatgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgagaaatataaaaaagtacatgtaCATTTTTACCAATTACGCTCTTTAG
- Protein Sequence
- MGPVGGDKPQEPYLQIVSQPQSSLSFRYKTEMKKIYGAIRSEEDRLSSSSAADSPPCLSSISNSSLSYPDTATTNSLCNYNPRPSETIPIIRCTLCTSEGKLHVHRLVSKQKREEVDDPHDIQVTARDFTVRFSQLAIVPTKKKCQVKVLRKKIQEHKRRMFNDKRRNDSFLLDEGLHILLYFNYITCVCVCVCVCVCVCVCVCVCVRNIKKYMYIFTNYAL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -