Basic Information

Insect: Hololepta plana
Gene Symbol: -
Assembly: GCA_963695495.1
Location: OY968836.1:5457843-5460496[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 0.63 53 4.2 0.1 8 23 58 73 52 73 0.79

2 13 7.1e-05 0.006 16.7 4.2 1 23 79 101 79 101 0.97

3 13 7.7e-05 0.0065 16.6 1.7 2 23 123 145 122 145 0.96

4 13 2e-05 0.0017 18.4 5.6 1 23 191 213 191 213 0.96

5 13 0.00012 0.0097 16.0 3.6 1 23 219 242 219 242 0.94

6 13 4.7e-06 0.00039 20.4 1.4 1 23 247 269 247 269 0.98

7 13 2.8e-06 0.00023 21.1 1.3 2 23 281 302 280 302 0.97

8 13 7.2e-09 6e-07 29.2 0.4 1 23 309 331 309 331 0.98

9 13 9e-06 0.00076 19.5 1.6 3 23 344 364 342 364 0.92

10 13 7.8e-05 0.0066 16.5 5.3 1 23 370 392 370 392 0.99

11 13 4e-06 0.00034 20.6 1.9 1 23 398 420 398 420 0.96

12 13 2.6e-07 2.2e-05 24.3 0.2 1 23 426 448 426 448 0.99

13 13 7e-05 0.0059 16.7 0.1 1 23 454 478 454 478 0.92

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	0.63	53	4.2	0.1	8	23	58	73	52	73	0.79
2	13	7.1e-05	0.006	16.7	4.2	1	23	79	101	79	101	0.97
3	13	7.7e-05	0.0065	16.6	1.7	2	23	123	145	122	145	0.96
4	13	2e-05	0.0017	18.4	5.6	1	23	191	213	191	213	0.96
5	13	0.00012	0.0097	16.0	3.6	1	23	219	242	219	242	0.94
6	13	4.7e-06	0.00039	20.4	1.4	1	23	247	269	247	269	0.98
7	13	2.8e-06	0.00023	21.1	1.3	2	23	281	302	280	302	0.97
8	13	7.2e-09	6e-07	29.2	0.4	1	23	309	331	309	331	0.98
9	13	9e-06	0.00076	19.5	1.6	3	23	344	364	342	364	0.92
10	13	7.8e-05	0.0066	16.5	5.3	1	23	370	392	370	392	0.99
11	13	4e-06	0.00034	20.6	1.9	1	23	398	420	398	420	0.96
12	13	2.6e-07	2.2e-05	24.3	0.2	1	23	426	448	426	448	0.99
13	13	7e-05	0.0059	16.7	0.1	1	23	454	478	454	478	0.92

Sequence Information

Coding Sequence: ATGGAGAACTTGTGCCGTTCTTGCATGAGCGAATGCGAGAACATGAAGAATTTGTTTACCTTGCGCGAATGCAACGAGGATAATTTAAAACTGGCCGATATGTTGATGGCTTGTGCATCGGTAAAGATTGATGAGAATGAAGGACTTCCAGTTGAAATATGTGGTCAATGTGAAGTTTTGAGAACAGAAGTAGGCCTGAAGGTACACATCAGGAGACACACTGGACTTAATTTGCATACTTGTGCTGTATGTGATAAGACTTATGCAAAGGAGAGTCATTTCAAGAGGCATCAGCTTTTGCATGGCAATAAAGTAGAAGAACCAGAATCAATAGTTAATGTTGCCAAAAAGAAAGATCGAACTATGGAGTGTGAATTTTGCGATAGAGTGTTCAAATACAAGAAGAGTTTTGCTCATCATCTGCAAGTGGAACACGGCGTAGTCGACGACGGTGAAACGAGTAAGTCGCCGTCAAACGTATACGATGAGACCGACGAAACGACAGCAGAAGATGGTaaagaaacgataataattacgcCGGAAATCCAAGGGATCGAACGCGAACGGATTCACGTGTGTCACGTGTGCGAGGCGACGTTCACACGATCGAATCATTTAACGCGTCACATGACGCTGCACCGAACCTTGTTGATACACAAATGCGATCGTTGCGAGAAATCGTACGCTACGACCGATCACTTGAAACGGCACGTACAAGATGATCACGTGGCGAAAGCGTACGATTGTAGCGTGTGCAAGAAGGGTTTCACGCGCGGCGAGCATCTCATCCGGCACTTGAAGGTCCATTTGAAAAGTTCCGACGAGCAGAAGAACAACGTCAAGTGTTCCGTTTGCAGTAAGGAATTCACCAGATTAGATCAATTCACTAGACACTTAAAAGTGCACTTGCAACAGGACAAGCGGTACGCGTGTAACGTTTGCGGGAAAGCATTCACGCGATTGGACAATTTGAAAACGCACCAACGCATCCATACCGGCGAAAAGAAGGAGAATGGAAAGTTGCATCTTTGCATTTACTGCGGCAAAGAGTTTAACAACTCAAGTAACATGATTGTCCACATGAGACGGCACACCGGCGAGCGACCGTACAAATGCACGCAATGCGGCAAAGGATTTCCGCGTTCGCACGATTTAAAGTGTCACGAGCGCACTCATTCCGGCGAACGACCGTATTTGTGCACGTTATGCGGCAAATCGTTCAACAAGAGCAACAAATTGTTGCGGCACACACGAATTCATACCGGCGAACGGCCGTACGTTTGCAACTTGTGCGGTCGCGCCTTTACGCAATCGAACGATTTAGCGTTACACTTGCGTCGACACACCGGTTCGCGGCCGTACGCTTGCGGCGTGTGTCCGGCACGCTTCATACAGTCCGGCCAATTAAAGGCCCATCGTCGTTCGACCGGCCATTGGATGGAGACGCAACCGGATTTGAAAGGCGGCCATCGCGTCGAACCGGTCGTGCCGCTCTCCGATCCGGCACCGATCAAATTCAAGACGTATggtaaaacgaagaaaaatgctgTCGTGAAGCCGGAAACCGTTTCTACCGTCGATAGCAGTACCACGGTGACGAACGAAACAACGATCAACGGACAACAACAACCGTCGCTTATTGTGACCGACGACGATAGGATGTTGACGggatatgatgatgatgatgccggTTTCGTTGCGAACGTCGAGCAGCGTGACGacgttttgcgaattaaatgcGAATCGGAGACGACGGATAATGGTCGCAACGGGTTTCAAACGGCGGCGTCGTTTCCTCACCATCCTGAAGCCTTCCATTATCAAACTTATTGA
Protein Sequence: MENLCRSCMSECENMKNLFTLRECNEDNLKLADMLMACASVKIDENEGLPVEICGQCEVLRTEVGLKVHIRRHTGLNLHTCAVCDKTYAKESHFKRHQLLHGNKVEEPESIVNVAKKKDRTMECEFCDRVFKYKKSFAHHLQVEHGVVDDGETSKSPSNVYDETDETTAEDGKETIIITPEIQGIERERIHVCHVCEATFTRSNHLTRHMTLHRTLLIHKCDRCEKSYATTDHLKRHVQDDHVAKAYDCSVCKKGFTRGEHLIRHLKVHLKSSDEQKNNVKCSVCSKEFTRLDQFTRHLKVHLQQDKRYACNVCGKAFTRLDNLKTHQRIHTGEKKENGKLHLCIYCGKEFNNSSNMIVHMRRHTGERPYKCTQCGKGFPRSHDLKCHERTHSGERPYLCTLCGKSFNKSNKLLRHTRIHTGERPYVCNLCGRAFTQSNDLALHLRRHTGSRPYACGVCPARFIQSGQLKAHRRSTGHWMETQPDLKGGHRVEPVVPLSDPAPIKFKTYGKTKKNAVVKPETVSTVDSSTTVTNETTINGQQQPSLIVTDDDRMLTGYDDDDAGFVANVEQRDDVLRIKCESETTDNGRNGFQTAASFPHHPEAFHYQTY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00807772;
90% Identity: iTF_00807772;
80% Identity: iTF_00807772;