Basic Information

Insect: Hololepta plana
Gene Symbol: -
Assembly: GCA_963695495.1
Location: OY968836.1:5457843-5460496[+]

Transcription Factor Domain

TF Family: zf-BED
Domain: zf-BED domain
PFAM: PF02892
TF Group: Zinc-Coordinating Group
Description: The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.15 2.6e+02 1.4 1.0 16 37 78 96 66 102 0.76

2 11 0.00092 1.6 8.5 0.1 12 43 117 145 108 146 0.87

3 11 0.061 1.1e+02 2.6 6.9 13 39 187 210 179 221 0.79

4 11 0.017 29 4.4 1.2 18 43 220 242 212 243 0.88

5 11 0.0035 6.1 6.6 1.1 18 41 248 272 244 273 0.85

6 11 0.00017 0.3 10.8 1.0 9 40 272 304 267 306 0.79

7 11 0.0026 4.5 7.0 0.7 13 38 305 327 302 332 0.83

8 11 5e-06 0.0088 15.7 2.6 17 41 342 363 322 365 0.77

9 11 0.57 1e+03 -0.5 0.6 18 34 371 387 367 392 0.83

10 11 0.12 2.1e+02 1.7 0.4 19 38 400 416 398 419 0.80

11 11 0.0025 4.4 7.1 0.7 2 41 412 447 411 448 0.76

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.15	2.6e+02	1.4	1.0	16	37	78	96	66	102	0.76
2	11	0.00092	1.6	8.5	0.1	12	43	117	145	108	146	0.87
3	11	0.061	1.1e+02	2.6	6.9	13	39	187	210	179	221	0.79
4	11	0.017	29	4.4	1.2	18	43	220	242	212	243	0.88
5	11	0.0035	6.1	6.6	1.1	18	41	248	272	244	273	0.85
6	11	0.00017	0.3	10.8	1.0	9	40	272	304	267	306	0.79
7	11	0.0026	4.5	7.0	0.7	13	38	305	327	302	332	0.83
8	11	5e-06	0.0088	15.7	2.6	17	41	342	363	322	365	0.77
9	11	0.57	1e+03	-0.5	0.6	18	34	371	387	367	392	0.83
10	11	0.12	2.1e+02	1.7	0.4	19	38	400	416	398	419	0.80
11	11	0.0025	4.4	7.1	0.7	2	41	412	447	411	448	0.76

Sequence Information

Coding Sequence: ATGGAGAACTTGTGCCGTTCTTGCATGAGCGAATGCGAGAACATGAAGAATTTGTTTACCTTGCGCGAATGCAACGAGGATAATTTAAAACTGGCCGATATGTTGATGGCTTGTGCATCGGTAAAGATTGATGAGAATGAAGGACTTCCAGTTGAAATATGTGGTCAATGTGAAGTTTTGAGAACAGAAGTAGGCCTGAAGGTACACATCAGGAGACACACTGGACTTAATTTGCATACTTGTGCTGTATGTGATAAGACTTATGCAAAGGAGAGTCATTTCAAGAGGCATCAGCTTTTGCATGGCAATAAAGTAGAAGAACCAGAATCAATAGTTAATGTTGCCAAAAAGAAAGATCGAACTATGGAGTGTGAATTTTGCGATAGAGTGTTCAAATACAAGAAGAGTTTTGCTCATCATCTGCAAGTGGAACACGGCGTAGTCGACGACGGTGAAACGAGTAAGTCGCCGTCAAACGTATACGATGAGACCGACGAAACGACAGCAGAAGATGGTaaagaaacgataataattacgcCGGAAATCCAAGGGATCGAACGCGAACGGATTCACGTGTGTCACGTGTGCGAGGCGACGTTCACACGATCGAATCATTTAACGCGTCACATGACGCTGCACCGAACCTTGTTGATACACAAATGCGATCGTTGCGAGAAATCGTACGCTACGACCGATCACTTGAAACGGCACGTACAAGATGATCACGTGGCGAAAGCGTACGATTGTAGCGTGTGCAAGAAGGGTTTCACGCGCGGCGAGCATCTCATCCGGCACTTGAAGGTCCATTTGAAAAGTTCCGACGAGCAGAAGAACAACGTCAAGTGTTCCGTTTGCAGTAAGGAATTCACCAGATTAGATCAATTCACTAGACACTTAAAAGTGCACTTGCAACAGGACAAGCGGTACGCGTGTAACGTTTGCGGGAAAGCATTCACGCGATTGGACAATTTGAAAACGCACCAACGCATCCATACCGGCGAAAAGAAGGAGAATGGAAAGTTGCATCTTTGCATTTACTGCGGCAAAGAGTTTAACAACTCAAGTAACATGATTGTCCACATGAGACGGCACACCGGCGAGCGACCGTACAAATGCACGCAATGCGGCAAAGGATTTCCGCGTTCGCACGATTTAAAGTGTCACGAGCGCACTCATTCCGGCGAACGACCGTATTTGTGCACGTTATGCGGCAAATCGTTCAACAAGAGCAACAAATTGTTGCGGCACACACGAATTCATACCGGCGAACGGCCGTACGTTTGCAACTTGTGCGGTCGCGCCTTTACGCAATCGAACGATTTAGCGTTACACTTGCGTCGACACACCGGTTCGCGGCCGTACGCTTGCGGCGTGTGTCCGGCACGCTTCATACAGTCCGGCCAATTAAAGGCCCATCGTCGTTCGACCGGCCATTGGATGGAGACGCAACCGGATTTGAAAGGCGGCCATCGCGTCGAACCGGTCGTGCCGCTCTCCGATCCGGCACCGATCAAATTCAAGACGTATggtaaaacgaagaaaaatgctgTCGTGAAGCCGGAAACCGTTTCTACCGTCGATAGCAGTACCACGGTGACGAACGAAACAACGATCAACGGACAACAACAACCGTCGCTTATTGTGACCGACGACGATAGGATGTTGACGggatatgatgatgatgatgccggTTTCGTTGCGAACGTCGAGCAGCGTGACGacgttttgcgaattaaatgcGAATCGGAGACGACGGATAATGGTCGCAACGGGTTTCAAACGGCGGCGTCGTTTCCTCACCATCCTGAAGCCTTCCATTATCAAACTTATTGA
Protein Sequence: MENLCRSCMSECENMKNLFTLRECNEDNLKLADMLMACASVKIDENEGLPVEICGQCEVLRTEVGLKVHIRRHTGLNLHTCAVCDKTYAKESHFKRHQLLHGNKVEEPESIVNVAKKKDRTMECEFCDRVFKYKKSFAHHLQVEHGVVDDGETSKSPSNVYDETDETTAEDGKETIIITPEIQGIERERIHVCHVCEATFTRSNHLTRHMTLHRTLLIHKCDRCEKSYATTDHLKRHVQDDHVAKAYDCSVCKKGFTRGEHLIRHLKVHLKSSDEQKNNVKCSVCSKEFTRLDQFTRHLKVHLQQDKRYACNVCGKAFTRLDNLKTHQRIHTGEKKENGKLHLCIYCGKEFNNSSNMIVHMRRHTGERPYKCTQCGKGFPRSHDLKCHERTHSGERPYLCTLCGKSFNKSNKLLRHTRIHTGERPYVCNLCGRAFTQSNDLALHLRRHTGSRPYACGVCPARFIQSGQLKAHRRSTGHWMETQPDLKGGHRVEPVVPLSDPAPIKFKTYGKTKKNAVVKPETVSTVDSSTTVTNETTINGQQQPSLIVTDDDRMLTGYDDDDAGFVANVEQRDDVLRIKCESETTDNGRNGFQTAASFPHHPEAFHYQTY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00807782;
90% Identity: iTF_00807782;
80% Identity: iTF_00807782;