Hpla002776.1
Basic Information
- Insect
- Hololepta plana
- Gene Symbol
- tfip11
- Assembly
- GCA_963695495.1
- Location
- OY968831.1:17560552-17564091[-]
Transcription Factor Domain
- TF Family
- GCFC
- Domain
- GCFC domain
- PFAM
- PF07842
- TF Group
- Unclassified Structure
- Description
- This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4.2e-96 3e-92 308.8 9.6 1 275 399 681 399 681 0.97 2 2 0.61 4.3e+03 -3.3 0.0 248 270 699 721 689 726 0.67
Sequence Information
- Coding Sequence
- ATGTCTGAAGACGAAGTGGAGAAATTTGAAATAACCGATTACGATTTGGAAAATGAATTTAGTGGATACAAAAATCGAAAAGGACTAAGCAAACATCAACAGATATACGGTATATGGGCAGATGATAGTGAAAATGAGGAAGATTCATCAGCCAATTATCTGAATAGAAAAGGACCAAAGAATTACTCGGCACCTATAGGATTTGTTGCAGGTGGTGTACAACAAGCTGGCaagaaaaatgggaaagagaAAGTTAAGGCTGAAACAaaaagtgatgatgatgatattgatGACAAGCCATCAACATCTTTTAAAACAGATGATACTTCTACTGAATCTGAAGAGGATGTACCTAGAAGAGGTTTTGGACAATCTAAGCTACGACAAGAAACTTCTTCTGAAGTAATTGGTGATATTGCTGGTTTAAGATCAAAGGGATCATCACTTGGAAAAATGGTTTTGCAGAATCAAGGTGTGGGCAATTGGGAAAAACATACAAAAGGCATTGgagcaaaattgttattgcaaatggGTTACCAACCTGGTAAAGGTTTAGGCAAAGATCTGCAGGGCATATCTGCACCAGTTGAGGCTCATCTACGTAAAGGACGTGGGGCTATTGGAGCATATGGTCCAGAGAAGAAGCAAACAATTGCACCAAATAAGGGAGAACAAATAACAGTGGATGACAAACATGAAGAAACATCATGGAAGAAACAGCAAGATGCACCAAAAAATAAGACCAgatattattatcgtagcGTTGACGATGtgattgaaaaaggaaaacgtccGGGTGGTTACAAAAGATCCGGAGTGTCCAGTGAATTAACTAAAGTGAAGGTGATTGATATGACGGGTCCACAGCAGAGAGTTTTAAGTGGTTATCACGCGCTGAGCGGTCTGAAGGCACCGCCTGGCGTTGAACATTATGAAGATGTGGTGCATAAGAAGTGTTCCAATTTTGCTTTACCAGAAATACAgcacaatttgaatttgttagTCGAGATGTGCGAACAGGATATTATCAACATAGATAGAAATAGTAGGCATAATCAGGATCGAATTGTTGCTTTAAAACATGATCAGGGCAATTTACAGGGTGTCCTAAAGAGAGAGGATTGTCTGGTCGATAATATGAAATCAGTTTTGGAGATTGTCCACAAATTAACTGATCCATCTTTAGGTCTGTCCCTTGGTCAAGTTGCATACATGTTCCAAGAATTACAAgaTAGCCACTTTGAGGAATACTGTCAATATGAATTGGGCGAATTGGCTCCTGGGTTAGTGGGTCCATTATTAACGTCTGCGTTGGCAAGTTGGTCGCCGTTAAATCAGCCGAGGCAATACGCGGACATTTATCAGCAATGGAAGAACATTTTGGAACGCGGCAACGCCGGCATCAATTGCGTCGAAAGACAGAGGCCGCATCGAGGGACAATAGAAGGTAATAGTATGGGAATTCTGCCATATGATAGTCTCGTTTGGCACACTTGGGTGCCTGTTGTCAGAACTTGTATTAGtgAATGGAAACCGCGCGATTGCGATCCGATGATAAATGTTATTGACATCTGGAATCCAATATTACCACCGTGGATATTAGATAATATACTGGACCAGCTCGTAATGCCTAAAATAACATCAGAGGTCAATAATTGGAATCCTTTAACGGACACCGTCCCAATACATTTATGGATACACCCGTGGATTCCAATTTTAAATGATAAATTGCAAGTGTCCATCTACCCTATAATACAAGAGAAATTAGGAACGGCTTTATCCAATTGGCATCCGTCAGATAGATCGgcaaaattaatgttaaaaccGTGGCAAAGGGCACTGCCAGAAGGTTCGTTTGTCGCGTTTCTTGTTAAACACATTGTACCTAAGCTACAAATATGTATGCAATCGCTTGTCATAAATCCGCATCAACAGCATTTAGATGCGTGGAATTGGGTGATGGATTGGAACGACATGCTTTCGGTCGGTAACATGACACTGATATTggataaattcttttttccgcGTTGGCTTCAAACGCTGGCGCTATGGCTAAATCATAATCCCGATTATTCGCAAGTGACCGTTTGGTATTCAGGTTGGAAACGAATGATTTCCGACGATCTCCTCGCACAACCGTCGATTAAAGATAACTTCCATAAAGCGTTGGAAATGATGAACAGGGCTGTGAGTAGCGGCAAACAGCCGGGCGCTAAAGAAACGGTCTCGTATCTTACTACGATGGAAACCAATAGACCGCCACCTCCACCACCGCCAAGGATTGACaCGTTGGCGGAAGCCGTGCGAACGGCGGCCAAGATACCGCAAGGTTTTAAGGATTTGTTGGCGAAACGGTGCGAAGAGAGAGGTATATTGTTCGTACCCATTGCGAATAAGTATCACGAAGCTAAACAAGTATATCGATTGGGTATGAACGGAGTCCAATGTTACATCGATAGGAACGTTGTATTTTACATGCAAAATAATTCTACTTGGCTGCCAACGTCATTGAATAAACTGTTAGATAtggcataa
- Protein Sequence
- MSEDEVEKFEITDYDLENEFSGYKNRKGLSKHQQIYGIWADDSENEEDSSANYLNRKGPKNYSAPIGFVAGGVQQAGKKNGKEKVKAETKSDDDDIDDKPSTSFKTDDTSTESEEDVPRRGFGQSKLRQETSSEVIGDIAGLRSKGSSLGKMVLQNQGVGNWEKHTKGIGAKLLLQMGYQPGKGLGKDLQGISAPVEAHLRKGRGAIGAYGPEKKQTIAPNKGEQITVDDKHEETSWKKQQDAPKNKTRYYYRSVDDVIEKGKRPGGYKRSGVSSELTKVKVIDMTGPQQRVLSGYHALSGLKAPPGVEHYEDVVHKKCSNFALPEIQHNLNLLVEMCEQDIINIDRNSRHNQDRIVALKHDQGNLQGVLKREDCLVDNMKSVLEIVHKLTDPSLGLSLGQVAYMFQELQDSHFEEYCQYELGELAPGLVGPLLTSALASWSPLNQPRQYADIYQQWKNILERGNAGINCVERQRPHRGTIEGNSMGILPYDSLVWHTWVPVVRTCISEWKPRDCDPMINVIDIWNPILPPWILDNILDQLVMPKITSEVNNWNPLTDTVPIHLWIHPWIPILNDKLQVSIYPIIQEKLGTALSNWHPSDRSAKLMLKPWQRALPEGSFVAFLVKHIVPKLQICMQSLVINPHQQHLDAWNWVMDWNDMLSVGNMTLILDKFFFPRWLQTLALWLNHNPDYSQVTVWYSGWKRMISDDLLAQPSIKDNFHKALEMMNRAVSSGKQPGAKETVSYLTTMETNRPPPPPPPRIDTLAEAVRTAAKIPQGFKDLLAKRCEERGILFVPIANKYHEAKQVYRLGMNGVQCYIDRNVVFYMQNNSTWLPTSLNKLLDMA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -