Hpla008807.1
Basic Information
- Insect
- Hololepta plana
- Gene Symbol
- bab1
- Assembly
- GCA_963695495.1
- Location
- OY968837.1:9172572-9178093[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 6e-18 8.5e-15 53.9 0.0 1 43 28 71 28 73 0.95 2 2 0.74 1e+03 -0.8 0.8 6 15 158 167 156 173 0.87
Sequence Information
- Coding Sequence
- ATGTGGCAGAAGTGCTGGAACACGAACCAGAGCCTCGTGCACAATTTGCGCTTCCGCGAGCGGGGACCGCTGAAGTCGTGGCGACCGGAGACGATGGCCGAGGCGATATTCTCCGTGCTCAAGGAGGGTCTCTCGCTGTCGCAGGCCGCCCGCAAGTACGACATACCGTATCCGACGTTCGTCTTGTACGCCAATCGGGTGCACAACATGTTAGGACCATCTGCCGACGGCGGTTCCGATCTGCGGCCAAAAGGTAGAGGCCGACCGCAGCGGATACTGTTGGGCGTGTGGCCGGACGAGCACATACGCGGCGTGATAAGGGCGGTCGTCTTCCGGGACTCGCACCAGATCAAAGAGGAGGCGGCCGCTCTCGGGTACCCGCGAATGCACGACGGCCTGACGATCCAGAGTTACCCGAACAGTTGTCCGAGCAACGGTTCGGATCCGAACGTGTCGCCGGGCGCGGCGGCCGCCGCggccgtcgccgccgtcgcccAGGGACTCCGTCAACAGATGTGCAGCATGGTGGCGGCGGCGCAGCACCAGAGTTCGGCGCACGACACGAACCCGGTGGCGAGCTTGGTGAATTCGTTGGCGCTGGCCGGACACTGCGGCGGCGTCTCGATGCCGAGCAACGGCGCGCCGCCGATGAGCATGAGCCACATGACGTCGATGCGGATGGGCAGTCCGGCGGGCAGCATCCAGGACCTGCGGATCAGTCCGGCCGGTTCCGGTCTGGAGAGTCCGATCTCGTCGCCGCTCGGGCTGACGGTGTCGAGCACGATGGAGCCGGCGATCAATTTGGGCATCGGCAACAGCATGGACGTCGGCGTCGGCGTGACGGGCATGTCGTACAAGCCGGCGCGGACGTTCACGTCGCCGCGCCCGGAGAATCTCTTCCAGGAGGACATCGACGACCTGGTGAAACCGATGCACGGTTCGAACGGTTCGCGACCGAAAGACGCGATGGCGACGATCAAAATGGAACCGTTGACGGAGTGCCGGGGCGAATAA
- Protein Sequence
- MWQKCWNTNQSLVHNLRFRERGPLKSWRPETMAEAIFSVLKEGLSLSQAARKYDIPYPTFVLYANRVHNMLGPSADGGSDLRPKGRGRPQRILLGVWPDEHIRGVIRAVVFRDSHQIKEEAAALGYPRMHDGLTIQSYPNSCPSNGSDPNVSPGAAAAAAVAAVAQGLRQQMCSMVAAAQHQSSAHDTNPVASLVNSLALAGHCGGVSMPSNGAPPMSMSHMTSMRMGSPAGSIQDLRISPAGSGLESPISSPLGLTVSSTMEPAINLGIGNSMDVGVGVTGMSYKPARTFTSPRPENLFQEDIDDLVKPMHGSNGSRPKDAMATIKMEPLTECRGE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01121512;
- 90% Identity
- -
- 80% Identity
- -