Hpse000776.1
Basic Information
- Gene Symbol
- -
- Assembly
- GCA_947369225.1
- Location
- OX376334.1:219357-220988[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 0.49 4.3e+02 1.5 0.0 23 43 105 124 94 127 0.85 2 4 0.00063 0.55 10.8 0.1 22 45 197 220 168 221 0.85 3 4 0.25 2.2e+02 2.5 0.2 22 45 287 311 258 312 0.71 4 4 0.00021 0.19 12.3 0.1 22 46 389 414 378 414 0.88
Sequence Information
- Coding Sequence
- ATGGAAACAAATACTACTCAAAACCCAGGCTACTGGTTTGTACTTCGCGAAGACCAAGGCAATGTCATATTCAGCAGCAATAACCTCACGCCCTTACAAAATTCCCAAATCGCTGTACCAGAAACTCGATATGTCGCGGAGGCGGTCCCCAGCCGCGCCTACGTTCAGGAGGAACATTCGGAGGGCAGTGACAGAGCTGCCGCCGGCAGGAGACGCAAGACCAAAGAGGAGGATACCTTCTGGGACAGGAACAAGGTCAAAGTGCTGCTCACGCTCTGCTTGGAGAACAAGGCCGTCCCCAAGGAGACACTGTGGACTGAAATCAGCGGCATTCTAGGAGTCACTCCTGAAGAGTGCAGCAATAAGTACAGACATTTACGGCGAACTTACTTAAGATTGCTGAAGAAAAAAAGATCAGGCAAACACATTAAGTGGGTGCACTACGCCACTTGTGAGGAGGTATTTACGGATCTAAAGGCACTGCCGCCATCCGTGCTGGAACCTTGGGAGGACGGCAAGGTGAGGAGGCTGCTCAGTCTCTACATAGAGAACATGCCTAGGTTCCGCAACCCTGGCTACTTACAAAAGGACATTTGGAAGGATATCGCTAACCAGTTGGGCACTACCGGGTATAATTGTTACCACAAATTCAAAAACCTGAGGAGGACCTATTGGAACGGGTTAAACCGTAATCGTGAGACAGGGAAGGTAACTAAGTGGGCGTACCATAATTATTTTGAAAGAATATATTACAACCACAAGCCCAGCAATAAGCCCTGGGACAGACACAAAATATTACAACTTTTAGAAGCATATGCCCAGATAGCACACAAGTTTAGAAATCCAAAGCTACAAAAGAAAGAACTTTGGAAAGAAATAGCCATGAAGGTTGGAGAGAGCCCTACAGTCTGTGATAAAAAATTCAGAAACTTGAAACAGACTTATGTCAGGTTGAAAATGAAAGCCAACTCGGGCAGGCTGAGTACAAAGTGGAGGTTTTATAAAGAGTTTGATGCAATATACAATAACACAACAAAATATATCGATATCGACGGGACACAGAAGATAGTTTACAGATCATGCCAAGAAGAGGACTACAAGAAAGAGTTGTTAACATTTTATTTGGAAAATAAAAACAAGTTCAGAGATCCGCTGACAAAAAACCGAACTTTGTGGAAGCAGATCGCTCCAAAACTGGGCTTAACAGCTGAGGAATGTGACAAGCACTTTCGGAATCTGAAACAGACTTATATCAGACTTGCATTGAAGAAGAAGCAGACTGGGAAATGTAACAAGTGGGCATATTACTCGTTATTTGAGAGGATATTTGATGAGTCAGAGCTGATCTATGACAGCAGTCGCCCTGCCGACGTAGAGGAGATAATGAAGAGCGAGATTCGGCGCGTGGTGGAGGACGTGCGCGAGCGACGCGACAGCGAGCGCAAGTTCGAGCGGCTCGTGCGGCTGGCAGAGGACTCCAACGACGTTCAAAGAGAACGGAATAGAATTCTCCAAGCTCTACTAAACAGAAAATGA
- Protein Sequence
- METNTTQNPGYWFVLREDQGNVIFSSNNLTPLQNSQIAVPETRYVAEAVPSRAYVQEEHSEGSDRAAAGRRRKTKEEDTFWDRNKVKVLLTLCLENKAVPKETLWTEISGILGVTPEECSNKYRHLRRTYLRLLKKKRSGKHIKWVHYATCEEVFTDLKALPPSVLEPWEDGKVRRLLSLYIENMPRFRNPGYLQKDIWKDIANQLGTTGYNCYHKFKNLRRTYWNGLNRNRETGKVTKWAYHNYFERIYYNHKPSNKPWDRHKILQLLEAYAQIAHKFRNPKLQKKELWKEIAMKVGESPTVCDKKFRNLKQTYVRLKMKANSGRLSTKWRFYKEFDAIYNNTTKYIDIDGTQKIVYRSCQEEDYKKELLTFYLENKNKFRDPLTKNRTLWKQIAPKLGLTAEECDKHFRNLKQTYIRLALKKKQTGKCNKWAYYSLFERIFDESELIYDSSRPADVEEIMKSEIRRVVEDVRERRDSERKFERLVRLAEDSNDVQRERNRILQALLNRK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00994155;
- 90% Identity
- iTF_00806478;
- 80% Identity
- iTF_00806478;