Hpse000776.1
Basic Information
- Gene Symbol
- -
- Assembly
- GCA_947369225.1
- Location
- OX376334.1:219357-220988[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 0.002 3.4 8.5 0.0 48 86 98 135 96 136 0.88 2 4 0.078 1.3e+02 3.4 0.0 51 83 195 226 167 230 0.79 3 4 0.0025 4.3 8.2 0.4 4 83 244 317 241 319 0.70 4 4 0.0017 2.8 8.8 0.0 51 84 388 420 363 423 0.84
Sequence Information
- Coding Sequence
- ATGGAAACAAATACTACTCAAAACCCAGGCTACTGGTTTGTACTTCGCGAAGACCAAGGCAATGTCATATTCAGCAGCAATAACCTCACGCCCTTACAAAATTCCCAAATCGCTGTACCAGAAACTCGATATGTCGCGGAGGCGGTCCCCAGCCGCGCCTACGTTCAGGAGGAACATTCGGAGGGCAGTGACAGAGCTGCCGCCGGCAGGAGACGCAAGACCAAAGAGGAGGATACCTTCTGGGACAGGAACAAGGTCAAAGTGCTGCTCACGCTCTGCTTGGAGAACAAGGCCGTCCCCAAGGAGACACTGTGGACTGAAATCAGCGGCATTCTAGGAGTCACTCCTGAAGAGTGCAGCAATAAGTACAGACATTTACGGCGAACTTACTTAAGATTGCTGAAGAAAAAAAGATCAGGCAAACACATTAAGTGGGTGCACTACGCCACTTGTGAGGAGGTATTTACGGATCTAAAGGCACTGCCGCCATCCGTGCTGGAACCTTGGGAGGACGGCAAGGTGAGGAGGCTGCTCAGTCTCTACATAGAGAACATGCCTAGGTTCCGCAACCCTGGCTACTTACAAAAGGACATTTGGAAGGATATCGCTAACCAGTTGGGCACTACCGGGTATAATTGTTACCACAAATTCAAAAACCTGAGGAGGACCTATTGGAACGGGTTAAACCGTAATCGTGAGACAGGGAAGGTAACTAAGTGGGCGTACCATAATTATTTTGAAAGAATATATTACAACCACAAGCCCAGCAATAAGCCCTGGGACAGACACAAAATATTACAACTTTTAGAAGCATATGCCCAGATAGCACACAAGTTTAGAAATCCAAAGCTACAAAAGAAAGAACTTTGGAAAGAAATAGCCATGAAGGTTGGAGAGAGCCCTACAGTCTGTGATAAAAAATTCAGAAACTTGAAACAGACTTATGTCAGGTTGAAAATGAAAGCCAACTCGGGCAGGCTGAGTACAAAGTGGAGGTTTTATAAAGAGTTTGATGCAATATACAATAACACAACAAAATATATCGATATCGACGGGACACAGAAGATAGTTTACAGATCATGCCAAGAAGAGGACTACAAGAAAGAGTTGTTAACATTTTATTTGGAAAATAAAAACAAGTTCAGAGATCCGCTGACAAAAAACCGAACTTTGTGGAAGCAGATCGCTCCAAAACTGGGCTTAACAGCTGAGGAATGTGACAAGCACTTTCGGAATCTGAAACAGACTTATATCAGACTTGCATTGAAGAAGAAGCAGACTGGGAAATGTAACAAGTGGGCATATTACTCGTTATTTGAGAGGATATTTGATGAGTCAGAGCTGATCTATGACAGCAGTCGCCCTGCCGACGTAGAGGAGATAATGAAGAGCGAGATTCGGCGCGTGGTGGAGGACGTGCGCGAGCGACGCGACAGCGAGCGCAAGTTCGAGCGGCTCGTGCGGCTGGCAGAGGACTCCAACGACGTTCAAAGAGAACGGAATAGAATTCTCCAAGCTCTACTAAACAGAAAATGA
- Protein Sequence
- METNTTQNPGYWFVLREDQGNVIFSSNNLTPLQNSQIAVPETRYVAEAVPSRAYVQEEHSEGSDRAAAGRRRKTKEEDTFWDRNKVKVLLTLCLENKAVPKETLWTEISGILGVTPEECSNKYRHLRRTYLRLLKKKRSGKHIKWVHYATCEEVFTDLKALPPSVLEPWEDGKVRRLLSLYIENMPRFRNPGYLQKDIWKDIANQLGTTGYNCYHKFKNLRRTYWNGLNRNRETGKVTKWAYHNYFERIYYNHKPSNKPWDRHKILQLLEAYAQIAHKFRNPKLQKKELWKEIAMKVGESPTVCDKKFRNLKQTYVRLKMKANSGRLSTKWRFYKEFDAIYNNTTKYIDIDGTQKIVYRSCQEEDYKKELLTFYLENKNKFRDPLTKNRTLWKQIAPKLGLTAEECDKHFRNLKQTYIRLALKKKQTGKCNKWAYYSLFERIFDESELIYDSSRPADVEEIMKSEIRRVVEDVRERRDSERKFERLVRLAEDSNDVQRERNRILQALLNRK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00994155;
- 90% Identity
- iTF_00806692;
- 80% Identity
- iTF_00806692;