Basic Information

Insect: Hofmannophila pseudospretella
Gene Symbol: -
Assembly: GCA_947369225.1
Location: OX376327.1:12183151-12185760[+]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 2.7e-07 9.2e-05 22.5 0.0 3 39 25 61 23 64 0.92

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	2.7e-07	9.2e-05	22.5	0.0	3	39	25	61	23	64	0.92

Sequence Information

Coding Sequence: ATGAAACCGAAAAAAAATGACAAGAAGGATAACCAGAACACTATAGTAAAAAAAAGAAAAGCATACAACCAAGAAAGTTTGAAAAATGCTATAGAAGCAGTGAAGAAGGGAATGTCCAAAAAATTGGCTTCAAAAACTTTTAATGTACCGAGAGGGACCATTCAATGTCGATTGAAAAATGTGAACTGTAAAGATCTTCCAGGTCCCAATCCGGTACTAGATAAAGAAGAAGAAGACGCCTTAGTAAGGTGGTTAAATGAGTGCTGCCGTAAAGGCTTCCCCAAAAGGAAGATAGATTTGCAATTAAGCGTGGCAAGTTTCATAAAAAAGGCGGGCCGTAAAAATCCTTTTAAAAATGGCTTTCCAGGCAAAAAATGGAATTCTCTTTTTATGCGACGCCATCCAGAATTGAGCGAAAGAACGCCTGAATCAGTTACATCTGCAAGTGCTGCAGTCTCTGAGCAGGATATCAAAGGTTGGTTTTCGAATATCGAATCATACTTAAAAGATAACGACTATTATGAAGTCCTGTCTGATCCGAGTAGGATTTTTAACGGAGACGAATCAAATTTTCAGCTTTGCCCCAAAAGCGGGAAAGTCCTTGCTTTAAGAGGAGAACGAGATGTTTATGAAGTAGATCATGCGGCTGCAAAATCAGCTCTCACAGTTCTATTCACCTTTGGAGCCAACGGCGACATAACGCCTCCTCTTGTTGTTTTTCCCAATAAAAGACTTCCAAAGGACATAACATCGACAGTTCCGGGTGAGTGGGGAATAGGACTAAGCGATTCAGGATGGATGAAAGCCGAACTGTTCTACGATTATATAAAAAACGTATTTCATCCTTACCTTCTGCGAACACAAAGGAAATTCCCAATTATATTATTTGTGGATGGCCATAAAACCCATCTTAGCATTGACGTCAGTGAGCTGTGCAGGAGTCTGGACATTGTCCTAATAGCGCTGTACCCTAATGCAACAAGATTATTGCAACCAGCCGATGTTGCTGCATTTAGACCTCTAAAGTTGGCATGGAAAAACAGCGTACTGCAATGGAGAAGGGACCATCCATTGGAGACACTCACAAAGAACAATTTTGTGCCACTACTGAAAGACGCGTTAGAAAATGGCGTGCAACCATCCACAGTCATAAATGGATTCAGAACAACCGGGTTATATCCATGGAATTCCGAAGCTATTAATTACAAAAAATGTCTAGGAAAAGGCTCCAGCGAAACGAAAAAAAGCACAAAGGAAGAACAGAAGGTTATGACTAAAGACATTTTGCATCAACTAGTTGGGACACAAAAGATGACTGCTTTACAAAATGTGTCTATAGATAGTCTTTCAGATAGTGACAAAATACTTAAAAAAATCTGCAATTTTTTCCAAAATAATGAAAAGGATAATACGGCCCCAGTTTTAAATGATTCAATAGACCTACTGACAAATGATTTAGAAGGGACTTCAACAAATAATGTTTCAGATTACGTCAACATCAATAATTTGCCACTATTATTTTTTGACGATTTAGTGACATCAAAGTCACCAAACCTGATCAAAGATAATATTGAAACTAACTTGCAAAATACTTTGGATGATATTAACGAAATTGTGGTTAATGCCGAAAAACGTGTCACACCAAGCCCAAATGACAATAAAACCGAAACTATAGCCGCGACTACGTTGGAGGATAATCAAAAATATTTTAATAAACAGTGCTTGACTCCAATCAAAATCCAAGATGTCTTGGTTAAACAGAAAACTCCACAAAGGAAAGGCATACGACAGGTGGCAAGATCATCATTTGTACTAACCTCAGATGAGTGGCACAAAGGAGAAATAGAAAAATACAATGTGAAAAAGATCAAAGAAGAACAAATTGAAACACGTAAAAAAGAAAGACTGCAAAAACTAGAAGAGAAGAAAATTCTAACAAATGTTATTAAAAAACAAACTAGTAAGAAACAGAAAACTAAACGTGAAACAGGATCAGACACATTGCAAAAACAAATAACTACAACTGTAGGAGAAGATGATAAAATTAATACTCTATGTGTCAATAATTTGTCTCAAGATCAAACACACTTTCTGATAGTATCCCATGAAGTGGAAATTCATGAGACACCTCTGTCTAAAAATAAAGAAAATGATAAGAACCACCTGACCTCAACTAAACGTAAAATGGACAGACCTACAGTAGAAGAAATAAATGAAAAAGAACTAAATGCACAAAAACAACTGAGTGACAATAAAATTGAAGAGATACAGATTACATCGAAGAAACAAAAAGTTGAAATGGGACAAACTTTCATACCACCAGAAAAAAAGATCCAAATTCTCTCAGACCAAAAAGTCATTTTCCCATTAAGGACAAACACTTCTAAAGTTACACAAAAAAAGACTGAAGATGTAAAGGGCAATTTCCCATTAAGACCTAAGACTTGTAAAGTTACTGAAAAAAAGACTGAAGGCGAAAAAGAACCAAGTACTTCTAAAATTACCCGAAAAAAGACTAATGGCGACGTACTTGATAGATTTATTGAAAATGCTAGCAATAAAACAGTTTACTCAATAGACGAGCTGCAAAGGATACTTTCTGAAGACTAA
Protein Sequence: MKPKKNDKKDNQNTIVKKRKAYNQESLKNAIEAVKKGMSKKLASKTFNVPRGTIQCRLKNVNCKDLPGPNPVLDKEEEDALVRWLNECCRKGFPKRKIDLQLSVASFIKKAGRKNPFKNGFPGKKWNSLFMRRHPELSERTPESVTSASAAVSEQDIKGWFSNIESYLKDNDYYEVLSDPSRIFNGDESNFQLCPKSGKVLALRGERDVYEVDHAAAKSALTVLFTFGANGDITPPLVVFPNKRLPKDITSTVPGEWGIGLSDSGWMKAELFYDYIKNVFHPYLLRTQRKFPIILFVDGHKTHLSIDVSELCRSLDIVLIALYPNATRLLQPADVAAFRPLKLAWKNSVLQWRRDHPLETLTKNNFVPLLKDALENGVQPSTVINGFRTTGLYPWNSEAINYKKCLGKGSSETKKSTKEEQKVMTKDILHQLVGTQKMTALQNVSIDSLSDSDKILKKICNFFQNNEKDNTAPVLNDSIDLLTNDLEGTSTNNVSDYVNINNLPLLFFDDLVTSKSPNLIKDNIETNLQNTLDDINEIVVNAEKRVTPSPNDNKTETIAATTLEDNQKYFNKQCLTPIKIQDVLVKQKTPQRKGIRQVARSSFVLTSDEWHKGEIEKYNVKKIKEEQIETRKKERLQKLEEKKILTNVIKKQTSKKQKTKRETGSDTLQKQITTTVGEDDKINTLCVNNLSQDQTHFLIVSHEVEIHETPLSKNKENDKNHLTSTKRKMDRPTVEEINEKELNAQKQLSDNKIEEIQITSKKQKVEMGQTFIPPEKKIQILSDQKVIFPLRTNTSKVTQKKTEDVKGNFPLRPKTCKVTEKKTEGEKEPSTSKITRKKTNGDVLDRFIENASNKTVYSIDELQRILSED

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00806676;
90% Identity: iTF_00806670; iTF_00806671; iTF_00806672; iTF_00806673; iTF_00806674; iTF_00806676;
80% Identity: iTF_00806670; iTF_00806671; iTF_00806672; iTF_00806673; iTF_00806676;