Hpse017628.1
Basic Information
- Gene Symbol
- Kdm5
- Assembly
- GCA_947369225.1
- Location
- OX376319.1:7368634-7371099[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.3e-23 3.8e-20 72.4 0.1 3 89 94 176 92 176 0.93
Sequence Information
- Coding Sequence
- ATGGATAGCAAAAATATTCAGAAAAATGCTATGCAAAGAAGCGCAGAGTTTACTTTTACTCCGCCACCAGAGGCTCCTGTGTTCGAGCCTACGGCCGAAGAATTTATGGATCCACTGGGATACATAGCCAAAATACGTCCCGTCGCTGAAAAGACGGGCATTTGCAAAATTAAACCCCCAGCGCGATGGCAGCCACCATTTTCATTAGATGTCGATAAATTGAAATTTGTACCACGAATTCAAAAAGTGAACGAACTGGAAGCCATAACGCGTTTGAAGCTATTATTTCTCGAAAAGATATTGAAATTTTGGGAGCTCCAAGGATCACCTCTGAAAATCCCTATGATAGAAAACAAAACCTTAGATTTGTATTGTCTGAAGTTTTGGGTAGATGAAGAAGGTGGTTTTGAAAACTGTAACAGTCCAAAAAAATGGCGTAAGATTGCGAATGCCATGGGGTATAGTCAAAATGCAAACACAATGAATTTTCTTCGGAATAACTATGAAAAAATTTTACTTCCCTATGATATATTTGAAAGGAGTAAAGCAGATATATTGAAAACTGTTAAAAAGACTGAAACAAAAACTGATATAAAAGATGAAGGAGTAGTTGGCAAACAAATATTTACAGAAATATCAGTAGAGTCAATAACAAAGGTCAAAGATGAATTTAAAGATGAGAAACCCCACACAAGTATTAAAAAAGCAAAAACTGGGTCAGATATAAAGCCTGACATTGAATATAATAAAACCAAAATGGATACTGAATTTAGTAAAACCAAAATTGATCTTGAAGAAATCAGGCGAAATAGAGAGTTAAGAAGACTTGCTTGTTATGGACCAGGACCAAAAATGCCTGGATTGAATGATGAGGAGTTTGATATTACAAAATGCAGAAAAAGGCCTAGATATGACCTGGACCCTTTAGCCATTTACACATGTGCTATTTGTCAGAAAGATCATAGAGATGATTTGCTTTTAATATGCAATGGTTGTTCTGATACTTACCACACCTTTTGTCTCAAACCTCCGTTGAATGCAGTGCCAGATGGTGATTGGCGTTGCCCCTGTTGTATAGCTGAAGAGGTACACAAACCTGCTGAAGCATTTGGATTTGCTCAAGCTGAAAGAGAATATACTTTGCAGCAATTTGGTGAAATGGCAGACAAGTTCAAATCAGACTATTTTGGAATGTCAGGCCATCTCGTACCAACAACTGTTGCTGAAAAAGAGTTTTGGAGGATTATATCATCTGTAGAAGAGGATGTCACAGTTGAATATGGGGCAGACTTGCATTCCATGGATCATGGTTCAGGGTTTCCTACTAAGTCTTCTCTGAATCTTTATCCAGGTGACCAAGAATATGTAGATTCTGGCTGGAATTTAAACAATCTACCAGTTTTAGATGGTTCTGTATTAAGATTTATAAATGCAGATATATCTGGTATGACTGTACCATGGATGTATGTAGGAATGTGCTTTTCAGCTTTCTGTTGGCACAATGAAGATCACTGGAGTTACTCAATCAATTACTTGCATTGGGGAGAGGCCAAAACTTGGTACGGTGTACCAGGAGTTGGTGCTGAATTGTTAGAAAATGCTATGAAAGCAGCAGCACCAGACCTATTCAAATCTCAGCCAGATTTACTACATCAATTGGTCACAATAATGAATCCAAACATACTAATTGCAGCAGGTGTGCCAATATACAGGACTGATCAACAAGCTGGAGAATTTGTCGTTACATTTCCCAGAGCATATCATGCAGGATTCAACCAAGGATATAACTTTGCTGAAGCTGTAAATTTCGCACCTCCAGATTGGCTTCATATTGGCAGGGATTGTATTACACACTACAAAAATTTAAAAAGGTTTTGTGTATTTTCACATGATGAGTTAATATGCAAAATGGCCTTGGAAGGTGATCGACTAGACCTGGAGACAGCATTGGAAACTCAAAAGGAATTAGTTCATGCAACAGCAGAGGAAGGTTCTTTAAGAGCATTTGTTGCAAAGAAAGGGTTGAAAAATGTTCGTAGAACTGCTTTTGAGTTACTCGGTGATGATGAGCGCTTGTGTGAATTGTGCAAAACCACATGCTTCCTGTCCTCTGTGTCATGTTCTGACTGCAAATACATGGCTTGTTTGCAACATGCTAGTACATTTTGCCAGTGTCCTTTAGAGAAAAAGACTCTGAATTATCGGTATGATATGGATGAATTGCATATTATGCTTCAAACAATTGATTTCAGGGTAAACAGTTTTGATAAATGGATGACTGAAACAAAGAATATTTTACTTCCTACTGCCCCTGATATTGGAAGACTACAAAAGTTAAAAGCTTTAGTAGATGAAGCAGATGAACTTAAAATCCCAAAGTGTGTTTTGCTAACACAATTAAAAAATGAATATACAAAAGCTGCTGAAAACATTGAACCCATTGTAATAGAATTAGATGATGATTGA
- Protein Sequence
- MDSKNIQKNAMQRSAEFTFTPPPEAPVFEPTAEEFMDPLGYIAKIRPVAEKTGICKIKPPARWQPPFSLDVDKLKFVPRIQKVNELEAITRLKLLFLEKILKFWELQGSPLKIPMIENKTLDLYCLKFWVDEEGGFENCNSPKKWRKIANAMGYSQNANTMNFLRNNYEKILLPYDIFERSKADILKTVKKTETKTDIKDEGVVGKQIFTEISVESITKVKDEFKDEKPHTSIKKAKTGSDIKPDIEYNKTKMDTEFSKTKIDLEEIRRNRELRRLACYGPGPKMPGLNDEEFDITKCRKRPRYDLDPLAIYTCAICQKDHRDDLLLICNGCSDTYHTFCLKPPLNAVPDGDWRCPCCIAEEVHKPAEAFGFAQAEREYTLQQFGEMADKFKSDYFGMSGHLVPTTVAEKEFWRIISSVEEDVTVEYGADLHSMDHGSGFPTKSSLNLYPGDQEYVDSGWNLNNLPVLDGSVLRFINADISGMTVPWMYVGMCFSAFCWHNEDHWSYSINYLHWGEAKTWYGVPGVGAELLENAMKAAAPDLFKSQPDLLHQLVTIMNPNILIAAGVPIYRTDQQAGEFVVTFPRAYHAGFNQGYNFAEAVNFAPPDWLHIGRDCITHYKNLKRFCVFSHDELICKMALEGDRLDLETALETQKELVHATAEEGSLRAFVAKKGLKNVRRTAFELLGDDERLCELCKTTCFLSSVSCSDCKYMACLQHASTFCQCPLEKKTLNYRYDMDELHIMLQTIDFRVNSFDKWMTETKNILLPTAPDIGRLQKLKALVDEADELKIPKCVLLTQLKNEYTKAAENIEPIVIELDDD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01487498;
- 90% Identity
- iTF_01090468; iTF_00994150; iTF_01401062; iTF_00674092; iTF_01500882; iTF_00354870; iTF_00027543; iTF_00026624;
- 80% Identity
- -