Basic Information

Gene Symbol
Kdm5
Assembly
GCA_963924505.1
Location
OZ004670.1:8869197-8871638[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 1.5e-22 3.4e-19 69.5 0.3 3 89 94 176 92 176 0.93

Sequence Information

Coding Sequence
ATGGATAGCAAGAATATTCAGAAAAATGCCATGCAGAAGAGTGCAGAGTTTACTTTCACCCCACCACCGGAGGCTCCTGTATTCGAGCCTACGCCCGAAGAGTTCATGGATCCTTTAGGGTACATCGCCAAAATAAGGCCCGTCGCAGAAAAAACCGGAATATGCAAAATAAAGCCTCCGTCGCGATGGCAGCCACCATTTTCATTAGATGtggataaattaaaatttgtccCACGAATACAAAAGGTAAATGAATTGGAAGCCATAACACGATTGAAGCTATTGTTTTTGGAAAAGATTCTGAAATTTTGGGAACTCCAAGGCTCTCCATTGAAGATTCCTATGATAGAAAACAAAACACTGGATTTGTACTGTCTCAAATTTTGGGTAGATGAAGAAGGTGGTTTTGAAAACTGTAAGAGTCCTAAAAAATGGCGTAAGATCGCCCATGCCATGGGATATACTCAAAATGCCTATGCAATGAATTTTCTCAACAAcaattatgaaaaaatattgCTTCCATATGAAATATTTGAGAAAAGCAAAGCGGACATACTCAAAACTGTAAAAAAGACTGAAACAAAAACTGAAGTAAAAGATGAATCCAATGATAGACCATTATTTACCGAAATCCCAGTGGAATCGATCACAAAAATCAAAGATGAAAATGATTATTTAGATATCAAGCCTCATACAAGTATTAAAAAAGCTAAAACTGGGTCGGACATAAAAACTGAGTTCGATAGTTCTAAGACTAAAATAGATGTTGAAGAAATTAGACGAAACAGAGAACTGAGGCGTCTTGCTTGCTACGGACCAGGACCTAAAATGCCAGGGCTAAATGACGAAGAGTTCGACATTACAAAATCTAGGAAGCGTCCCAGATATGAACTTGATCCTTTAGCTATTTACACATGTGCTATTTGCCAAAAAGATCACAGAGATGACCTCCTTCTGATTTGCAATGGTTGTTCCGACACTTATCATACATTTTGCTTGAGACCCCCGCTCACAGCAGTGCCAGATGGTGATTGGCGATGTCCTTGTTGTATAGCTGAGGAAGTGCACAAACCGGCCGAGGCCTTCGGCTTTGCTCAAGCTGAAAGAGAATACACTCTTCAACAATTTGGGGAGATGGCCGATAAATTCAAGTCTGATTACTTTAACATGTCTGGACATTTAGTTCCAACAACAGTTGCAGAAAAAGAATTTTGGAGGATCATATCATCCGTGGAAGAAGATGTTACAGTAGAATATGGTGCTGACTTGCACTCTATGGACCATGGCTCTGGCTTTCCTACAAAGTCTTCCTTGAACCTATATCCGGGTGATCAGGAGTATGTAGATTCCGGATGGAATCTGAACAATCTTCCAGTACTAGAGGGCTCCGTTTTGAGATTTATAAACGCAGACATATCCGGCATGACTGTACCTTGGATGTATGTGGGTATGTGCTTTGCTGCTTTTTGCTGGCACAATGAAGATCATTGGAGTTACTCTATTAACTACTTGCATTGGGGTGAAGCTAAGACTTGGTATGGAGTTCCAGGAAGTGGTGCTGAAATATTAGAAAATGCTATGAAGGCAGCAGCACCTGATCTCTTCAAATCTCAACCTGACTTACTACATCAGCTCGTTACAATCATGAACCCAAACATTCTAATGGCAGCGGGTGTACCCATATACAGGACAGATCAGCAAGCGGGAGAGTTTGTTGTTACTTTCCCCAGAGCATATCATGCTGGGTTTAACCAAGGATATAACTTTGCCGAAGCTGTTAATTTTGCACCTCCAGACTGGCTTCATATTGGGAGAGATTGTATAACACACTATAAGAACCTGAAAAGATTTTGTGTATTTTCACATGATGAACTTATCTGCAAAATGGCATTGGAAGGTGATCGACTGGATTTAGAGACAGCTTTGGAAACACAGAAAGAGCTTGTGCATGCTACTGAAGAGGAAGGTTCCTTAAGAGCATTGATTGCAAAGAAAGGCTTGAAAAATGTTCGCAGAACCGCATTTGAGTTACTTGGTGACGATGAACGTCTCTGTGAAGTTTGTAAAACAACATGCTTCTTGTCCTCAGTTTCTTGTGCAGATTGTAAACATATGGCGTGTCTACAACATGCCACAAACTTCTGTCAGTGTCCCTTGGAGAAAAAGACTCTTAATTATCGATATGATATGGATGAATTGCATATAATGTTGCAAACCATCGATTTCAGAGTGAACAGCTTTGATAAGTGGATGACAGAGACAAAGAATATACTTCTTCCAACAGCCCCAGATATAGGAAGACTTCAAAAGTTAAAAGCATTAGTAGATGAGGCAGATGAACTCAAAATACCAAAGTGTGTGTTACTAACACAGTTGAAAGAAGAATACACAAAAGCCACTGAAAATGTTGAACCCATTGTAATAGAATTAGATGATGATTGA
Protein Sequence
MDSKNIQKNAMQKSAEFTFTPPPEAPVFEPTPEEFMDPLGYIAKIRPVAEKTGICKIKPPSRWQPPFSLDVDKLKFVPRIQKVNELEAITRLKLLFLEKILKFWELQGSPLKIPMIENKTLDLYCLKFWVDEEGGFENCKSPKKWRKIAHAMGYTQNAYAMNFLNNNYEKILLPYEIFEKSKADILKTVKKTETKTEVKDESNDRPLFTEIPVESITKIKDENDYLDIKPHTSIKKAKTGSDIKTEFDSSKTKIDVEEIRRNRELRRLACYGPGPKMPGLNDEEFDITKSRKRPRYELDPLAIYTCAICQKDHRDDLLLICNGCSDTYHTFCLRPPLTAVPDGDWRCPCCIAEEVHKPAEAFGFAQAEREYTLQQFGEMADKFKSDYFNMSGHLVPTTVAEKEFWRIISSVEEDVTVEYGADLHSMDHGSGFPTKSSLNLYPGDQEYVDSGWNLNNLPVLEGSVLRFINADISGMTVPWMYVGMCFAAFCWHNEDHWSYSINYLHWGEAKTWYGVPGSGAEILENAMKAAAPDLFKSQPDLLHQLVTIMNPNILMAAGVPIYRTDQQAGEFVVTFPRAYHAGFNQGYNFAEAVNFAPPDWLHIGRDCITHYKNLKRFCVFSHDELICKMALEGDRLDLETALETQKELVHATEEEGSLRALIAKKGLKNVRRTAFELLGDDERLCEVCKTTCFLSSVSCADCKHMACLQHATNFCQCPLEKKTLNYRYDMDELHIMLQTIDFRVNSFDKWMTETKNILLPTAPDIGRLQKLKALVDEADELKIPKCVLLTQLKEEYTKATENVEPIVIELDDD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01487498;
90% Identity
iTF_00806472;
80% Identity
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