Basic Information

Insect: Hirtodrosophila trivittata
Gene Symbol: stc
Assembly: GCA_035045065.1
Location: JAWNNK010000856.1:6014614-6017968[-]

Transcription Factor Domain

TF Family: zf-NF-X1
Domain: zf-NF-X1 domain
PFAM: PF01422
TF Group: Zinc-Coordinating Group
Description: This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 1.4 1.6e+04 -3.6 0.5 15 18 349 352 348 353 0.79

2 16 2 2.2e+04 -4.1 1.6 15 19 376 380 375 380 0.81

3 16 0.01 1.1e+02 3.2 2.0 4 11 409 416 408 418 0.92

4 16 3.7e-07 0.0041 17.4 13.9 3 19 422 438 421 438 0.94

5 16 1.9e-07 0.0021 18.3 14.0 1 18 474 491 474 492 0.94

6 16 1.7 1.9e+04 -3.9 1.5 7 13 496 502 496 503 0.75

7 16 2e-09 2.2e-05 24.7 12.9 1 19 532 550 532 550 0.98

8 16 1.1 1.2e+04 -3.3 0.5 5 10 580 585 580 585 0.90

9 16 2.3e-05 0.26 11.6 17.0 4 19 598 613 591 613 0.88

10 16 0.053 5.8e+02 0.9 11.5 1 11 653 663 653 675 0.79

11 16 2.8e-10 3e-06 27.4 15.1 1 18 680 697 680 698 0.97

12 16 2 2.2e+04 -4.3 1.2 6 10 727 731 727 731 0.88

13 16 2 2.2e+04 -6.6 9.7 10 18 745 754 735 755 0.80

14 16 2 2.2e+04 -4.5 1.5 10 13 762 765 760 766 0.80

15 16 7.3e-08 0.00081 19.6 13.9 1 16 791 806 791 816 0.94

16 16 2e-05 0.22 11.9 13.0 1 19 823 842 823 842 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	1.4	1.6e+04	-3.6	0.5	15	18	349	352	348	353	0.79
2	16	2	2.2e+04	-4.1	1.6	15	19	376	380	375	380	0.81
3	16	0.01	1.1e+02	3.2	2.0	4	11	409	416	408	418	0.92
4	16	3.7e-07	0.0041	17.4	13.9	3	19	422	438	421	438	0.94
5	16	1.9e-07	0.0021	18.3	14.0	1	18	474	491	474	492	0.94
6	16	1.7	1.9e+04	-3.9	1.5	7	13	496	502	496	503	0.75
7	16	2e-09	2.2e-05	24.7	12.9	1	19	532	550	532	550	0.98
8	16	1.1	1.2e+04	-3.3	0.5	5	10	580	585	580	585	0.90
9	16	2.3e-05	0.26	11.6	17.0	4	19	598	613	591	613	0.88
10	16	0.053	5.8e+02	0.9	11.5	1	11	653	663	653	675	0.79
11	16	2.8e-10	3e-06	27.4	15.1	1	18	680	697	680	698	0.97
12	16	2	2.2e+04	-4.3	1.2	6	10	727	731	727	731	0.88
13	16	2	2.2e+04	-6.6	9.7	10	18	745	754	735	755	0.80
14	16	2	2.2e+04	-4.5	1.5	10	13	762	765	760	766	0.80
15	16	7.3e-08	0.00081	19.6	13.9	1	16	791	806	791	816	0.94
16	16	2e-05	0.22	11.9	13.0	1	19	823	842	823	842	0.96

Sequence Information

Coding Sequence: ATGGCTGAGTactggcagcagcaccaacagcagcagcaccagacAAACGGAGCTGCAAGCAATGAGTCAACCTCTGGCTGCAATGGCGGCAGTGGCGTCTCAGCCAGTGCtgctggcaacaacaacaactatgtgaattttaatcaatttatcaCGCAACACAATTTAGGCTCCAGAGGCTACAGTattggtggcggcggcggtgccTTTGGACTGATGCCCAGCAGCTCTACTGCAGCCCTACCCTCCAACAGCAGCTACTCCAGCGACAATATTGGCGCGCCTTTTCTTGGGTATCAAAACGGTGCGAGCAGCAGTCACAATCAGGCATCAGCTGCTACCGTGTACTCACCGTTTGGGAATAGCCAATTTGCTGGAGCTCCAAGTAGCTTCGATTTTAGTAATTCAAAGCTGCAGGCATCGGCTCCCGAATTCGTGCCTAATTTTGCAAAACTAAGCCTTACGCCATCGCCTGCTACGGTTATGGTGTCGCCTTTAGTTACTTttagtaacaacaacagtaacactGCCACACAGCCAAATAGTGAAACAGCCCATGAGTCTGCAACTATTAATCATCATCAGTCATCAGTTTATCATCAACAGCCGCAACAGAAAGGTGGCGATAACAGGCAACCAAAGCCTAATGGCAGTAATAGCCGTAATCATCGGCGCAACGATTATCGAGAGGATAGAAGCGAGCGTAATGAGGATCGCTATGACCGCAACGATCGCAAAAAGCCGCAGAAGCAACAGCGCTACGACAATCATCGCAGCAATAAGCGACGTGATGACTGGAATCGCAATCGGGATCGCATCAACGGATATTCACGCGCTGTAGAGGAACTGGACACCAGTAACAGCAACGACAGTGCCCAGCCCTCGCCCGAGAAgcaaccacagccacagcagatCTCGCCTAGACGCGCACCTGATAATGAGAAGTTGTCGCAGCGCGAGAAACTTATGCGTGACATTGAGCAGCGACGCTTGGAGTGTCTGGTGTGCGTGGAGCAGATCAAGGCACACCATGGCACCTGGTCATGTCAAAACTGTTACCATGTGCTGCATCTTAAGTGTACTGTTACGTGGGCGAGTAGCTCAAGATCAGCCGAGGGCTGGCGCTGCCCGGCCTGCCAGAATGTGCTGCTGGATGTGCCACGCGATTATCTCTGCTTTTGTGGTAAACTGAAGAATCCGCCCTTGAGCCGAACTGAGTTGGCCCACACCTGTGGAGAACTCTGTTGTCGTGTCGAGGGCTGCATTCATGCATGCACACTGCTCTGTCATCCAGGTCCGTGTCCTCCGTGCCAAGCGAACGTAACTCGTAGCTGCGGCTGTGGACGCACCAGCAAGCTGATGCAGTGCGCCATGAAGCAGCTACTACAGTGCGATGCGATCTGTGACAAGCTACTCAATTGCAACGAGCAtcgctgccagcagctgtgTCACACTGGTAAGTGCGATCCATGCGGGGAGCAGGTGCAGCAGAACTGTCACTGTGGCAAACAGCAGCGGGAGGTGCTGTGCACCAAGGAGAGCCAGGATAAGAGAAACTATTCCTGCAAAGAGTGCTGCAGCAAGCCATTGCCCTGTGGGAATCACAAGTGCAAGGACTCATGTCATGCGGGTGCCTGTCGTCCCTGCAAGCTCAGCCCAGCGCAGATCACCAGCTGCCCCTGTGGCAAGCTACCCGTGCCGGCATCACAGCGCAGCAGCTGCCTGGACGTAGTGCCCACCTGCGAGGGAGTCTGTGGCAAAACGTTACGTTGCGGCAAGCCAGCGCATCCGCATCAGTGTGCCAGCAAGTGCCACCTGGGCCAGTGCCCACCCTGTCCTAAACAAACTGCCGTTAAGTGCCGCTGCGGTCACATGGATCAAATGATCAAGTGCCGACAGTTGTCAACGCGTGCGGATGACGCTCGCTGCAAGCGGCGCTGCACCAAGAAGCGTAGCTGTGGCAAGCATAAATGCAACGCCGAGTGCTGCATTGACATTGATCATGCCTGTCCGATGCCCTGCAATCGCACATTAACCTGTGGACGTCACAAGTGTGATCAGCCTTGTCATCGCGGCAACTGTCCGCCCTGCTATCGGAGCAGCTTCGAGGAGCTCTACTGCGAGTGCGGCGCTGAGGTTATCTATCCACCAGTGCCCTGTGGCACCAAGAAGCCCGTGTGCAAGCGTCCATGCACGCGCACCCACGGCTGCGAGCATGCGCCGCAGCATAACTGCCATGCGGCGGCCAGCTGCCCGCCTTGCATGATGTTCACCACCAAATGGTGCCACGGCGGCCACGAGCAGCGCAAGACCATTCCCTGCTCGCAGGCCAGCTTCAGTTGCGGCCTGGCTTGTGGTAAGCCACTTGCCTGTGGCCGCCACAAATGCATCAAGCCTTGTCACGAGGGCGACTGCCAGCAGGCGGGTGAACTGTGCCGCCAAAGCTGCACCAAACCTCGTCTTAGCTGTGGTCACAAGTGTGCCGCTCCTTGCCACGATAACGATTGCCCTGAAACGCCGTGTAAGGAGGTCGTCGAGGTGCAGTGCGAATGTGGTAATCGTAAGCAGAGCCGCAGCTGCCAGGAGCTTGCCAGAGAGCACAGTCGTATAGCCACCGCTCAGCTAGCCTCGTCCATGGCCGAAATGTCACGCGGTAACTACATGGAACTCAGCGAGATTCTGGCACCTAAAACGagcaaatcaaacaaaacGTTGGATTGCAATGACGAGTGTCGCCTGTTGGAGCGCAATCGTCGATTAGCTGTTGGTTTGCAGTCGCGCAGTACGGACACACAGGTCAAATCACTCACGAAATATTCAGAGTTCTTGCGGGGCTTTGCCAAGCGTAACCCAGCGCTGACGAAGAGCGTGTATGAAACACTGAGTGATTTGGTGAAGCTGGCCAAGGAGAGCAAACAGAAGTCCAGAAGTCACTCGTTTCCTACCATGAATCGTGAGAAGCGTCAATTGGTGCATGAACTGTGTGAGGTGTTCGGCGTGGAGTCGGTGTCCTATGACAAGGAGCCTAATCGCAATGTAGTGGCGACAGCTAACAAAGAGCGCTGCTGGTTGCCTGCCACTAGTATCATGGAGGTACTGGCACGCGAATCGGGCCAACGTCGCGTGCCAGTGCCCAGCAACAATGCCTGGGGCCTTAAGAAATAA
Protein Sequence: MAEYWQQHQQQQHQTNGAASNESTSGCNGGSGVSASAAGNNNNYVNFNQFITQHNLGSRGYSIGGGGGAFGLMPSSSTAALPSNSSYSSDNIGAPFLGYQNGASSSHNQASAATVYSPFGNSQFAGAPSSFDFSNSKLQASAPEFVPNFAKLSLTPSPATVMVSPLVTFSNNNSNTATQPNSETAHESATINHHQSSVYHQQPQQKGGDNRQPKPNGSNSRNHRRNDYREDRSERNEDRYDRNDRKKPQKQQRYDNHRSNKRRDDWNRNRDRINGYSRAVEELDTSNSNDSAQPSPEKQPQPQQISPRRAPDNEKLSQREKLMRDIEQRRLECLVCVEQIKAHHGTWSCQNCYHVLHLKCTVTWASSSRSAEGWRCPACQNVLLDVPRDYLCFCGKLKNPPLSRTELAHTCGELCCRVEGCIHACTLLCHPGPCPPCQANVTRSCGCGRTSKLMQCAMKQLLQCDAICDKLLNCNEHRCQQLCHTGKCDPCGEQVQQNCHCGKQQREVLCTKESQDKRNYSCKECCSKPLPCGNHKCKDSCHAGACRPCKLSPAQITSCPCGKLPVPASQRSSCLDVVPTCEGVCGKTLRCGKPAHPHQCASKCHLGQCPPCPKQTAVKCRCGHMDQMIKCRQLSTRADDARCKRRCTKKRSCGKHKCNAECCIDIDHACPMPCNRTLTCGRHKCDQPCHRGNCPPCYRSSFEELYCECGAEVIYPPVPCGTKKPVCKRPCTRTHGCEHAPQHNCHAAASCPPCMMFTTKWCHGGHEQRKTIPCSQASFSCGLACGKPLACGRHKCIKPCHEGDCQQAGELCRQSCTKPRLSCGHKCAAPCHDNDCPETPCKEVVEVQCECGNRKQSRSCQELAREHSRIATAQLASSMAEMSRGNYMELSEILAPKTSKSNKTLDCNDECRLLERNRRLAVGLQSRSTDTQVKSLTKYSEFLRGFAKRNPALTKSVYETLSDLVKLAKESKQKSRSHSFPTMNREKRQLVHELCEVFGVESVSYDKEPNRNVVATANKERCWLPATSIMEVLARESGQRRVPVPSNNAWGLKK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00472738;
90% Identity: iTF_01570625;
80% Identity: -