Hhis019015.1
Basic Information
- Insect
- Hirtodrosophila histrioides
- Gene Symbol
- stc
- Assembly
- GCA_037075165.1
- Location
- JBAMCL010000799.1:419813-423543[-]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 16 1.4 1.5e+04 -3.6 0.5 15 18 351 354 350 355 0.79 2 16 2 2.1e+04 -4.1 1.6 15 19 378 382 377 382 0.81 3 16 0.056 5.9e+02 0.9 2.0 4 11 411 418 410 419 0.90 4 16 5.8e-07 0.0061 16.8 15.1 1 19 423 440 423 440 0.93 5 16 1.4 1.5e+04 -3.6 1.1 6 10 466 470 465 470 0.89 6 16 2.5e-08 0.00026 21.2 10.9 1 18 476 493 476 494 0.98 7 16 2 2.1e+04 -6.2 3.9 7 13 498 504 498 505 0.74 8 16 2e-09 2.1e-05 24.7 12.9 1 19 534 552 534 552 0.98 9 16 1.1 1.2e+04 -3.3 0.5 5 10 582 587 582 587 0.90 10 16 3.3e-05 0.35 11.2 16.3 4 19 600 615 593 615 0.87 11 16 0.14 1.5e+03 -0.4 11.7 1 11 655 665 655 677 0.79 12 16 4.7e-10 5e-06 26.7 15.5 1 18 682 699 682 700 0.97 13 16 2 2.1e+04 -4.3 1.2 6 10 729 733 729 733 0.88 14 16 2 2.1e+04 -6.0 9.2 10 18 747 756 736 757 0.78 15 16 1.2e-08 0.00013 22.1 11.4 1 16 793 808 793 815 0.95 16 16 2e-05 0.21 11.9 13.0 1 19 825 844 825 844 0.96
Sequence Information
- Coding Sequence
- ATGGCCGAGtattggcagcagcagcagcaacaacaacaacagcagcagcagcagctgacaaACGGCGCTGCTAACGTTCCAGCAGTCCACAATGAGTCAGCAGCTGCCTGTAATGGCGGCAACGCTGCTGCTagtggcaacaataacaactatgtaaatttcaatcaatttatcACGCAACACAATCTGGCCAGCTCCAGCTATAGcattggcggcggcggcggcgcctTTGGCCTGACgcccagcggcagcagcaacagcagcaacactgcCAACAACTCCtccaacggcagcggcagcggcagcagcaatagcaacagcttTGGCGGCCAATTTTTTGGCTATCAAAATGGTGCGGGGGGCAACAATTATCAAGGCACGGGGCAAGCTTATTCCAATCTCTACTCGCCCTTTGGCAACAATCCTTTTGCTGCCTCGAGTGGCTTTGATTTTAGCACTTCCAAGCTGCAGGCAACGGCGCCAGAATTTGTGCCCAACTTTGCCAAACTCAGCCTGACTGCGGCTCCAGCAACGGATCCCAAGAcctataacaataacagccaCACTGCCACACAGCCAAACAGTGAAGCGGCCAACCATCAAGAGGCAGCAAACATcaatcagcatcagcagcagcagcaacagcggcagccaAAGCCGCacggcagcaacagtcgcCAGCAGCGACGCAACGACTATCGCGACGAACGCAGCGAGCGCAATGAGGATCGCTATGATCGCCGAAAGccgcagaagcagcagcgctaTGACAATCATCGCAGCAACAAGCGACGCGACGACTGGAATCGCAATCGGGATCGCATCAATGGCTATACGCGCGCCGCAGAGGAGCTGGACacgagcaacagcaacgacagcGCCCAGCCGTCGCCGgagaagcaacagcagccacagcaaatCTCGCCGAGACGTGCGCCCGATAATGAGAAACTGTCGCAGCGGGAGAAACTTGTGCGCGACATTGAGCAGCGTCGTCTGGAGTGTCTGGTGTGCGTGGAGCAGATAAAGGCGCATCATGGCACCTGGTCCTGCCAGAACTGTTATCATGTGCTGCATCTGAAGTGCACCATTACGTGGGCGAGCAGCTCCAAGTCGGCCGAGGGCTGGCGCTGCCCGGCCTGTCAGAATGTGCTCGAGGAGCTGCCACGGGATTACCTATGCTTTTGCGGCAAGCTGAAGAATCCGCCGCTGACGCGCAACGAATTGGCGCACAGCTGCGGCGAGTTATGCTGTCGCGTTGAAGGCTGCAGTCATGCGTGCACGCTGCTCTGCCATCCGGGGCCATGTCCGCCCTGCCAGGCAAATGTGAGCCGTAACTGCGGCTGCGGGCGCACCAGCAAGCTGATGCAGTGCGCCatgaagcagcagctgcaatgtGAATCCATTTGCGACAAGCCGCTCAACTGCAGTGAGCATCGCTGTGATCAGCTCTGTCATGCCGGCAAGTGCGAGCCGTGTGCTGAGCTGGTGGAGCAGCATTGCCACTGTGGCAAGCAGCAACGCGAGGTGCAGTGCACCAGGGAGAGCCAGGACAAGCGCAGCTACTCGTGCAAGGAGTGCTGCGGCAAACCGCTGCCTTGTGGCAATCACAAATGCAAGGACTCGTGCCATGCCGGCGCCTGTCGCCCCTGCAAGTTGAGCCCAACACAAATCACGAGTTGCCCCTGCGGCAAGCTGCCAGTGCCTCCggagcagcgcagcagctgccTGGACGCCGTGCCCACCTGCGAGGGTGTTTGCGGCAAAACGCTGCGCTGCGGCAAGCCGGCGCATCCGCATCAGTGTGCCAGCAAATGCCACCTGGGCCAGTGCCCGCCCTGTCAAAAGCAGACGGCTGTCAAGTGCCGCTGCGGCCACATGGACCAGCTGATCAAGTGCCGGCAGTTGTCTACGCGTGCGGACGATGCTCGCTGCAAGCGGCGCTGCACAAAGAAACGCAGCTGCGGCAAGCACAAGTGCAACGTCGAATGCTGCATTGATATTGATCACGCCTGCCCGCTGCCCTGCAATCGCACACTCACCTGTGGCAAGCACAAATGCGACCAGCCCTGTCATCGCGGCAACTGCCCGCCCTGCTATCGCAGCAGCTTCGAGGAGCTGTACTGCGAATGCGGCGCCGAAGTCATCTATCCGCCTGTGCCCTGCGGCACCAAGAAGCCCATCTGCAAGCGTCCCTGCTCGCGCACCCACGGCTGCGAGCATGTGCCGCAGCACAACTGCCATGCGGCGGCCAGCTGCCCGCCCTGCATGATGTTCACCACGAAGTGGTGCCACGGCAGCCACGAGCAGCGCAAGACCATTCCCTGCTCGCAGGCCAGCTTCAGTTGTGGCCTGGCATGCGGCAAACCACTCGCCTGCGGCCGCCACAAGTGCATCAAGCCCTGCCACGAGGGCGATTGCCAGCAGGCGGGCGAACTGTGCCGCCAGAGCTGCATCAAGCCGCGCCTGCTTTGCGGGCACAAGTGTGCGGCACCATGCCACGATAACGATTGTCCCGAAACGCCTTGCAAGGAGCTCGTCGAGGTGCAGTGCGAGTGCGGCAATCGCAAGCAGAACCGCAGCTGCCAGGAGCTGGCCAGGGAGCATAGTCGCATTGCCACCGCTCAGTTGGCCTCCTCAATGGCGGAGATGTCACGCGGCAACTACATGGAACTCAGCGAAATTTTGGCTCCCGGCAAAACtagcaaatcaaacaaaacCTTGGACTGCAACGATGAGTGCCGTCTGTTGGAGCGCAATCGTCGTTTGGCTATAGGCTTGCAGTCGCGCAATCCGGAGACGCAGTTGAAGTCGCTTACTAAGTACTCGGAATTCTTGCGTGGCTTTGCCAAGCGCAATCCTGTGCTAACCAAGAGCGTCTATGAAACTCTCAGTGACTTGGTTAAGTTGGCCAAGGAGAGCAAGCAGAAATCGAGGAGTCACTCATTTCCCACCATGAATCGGGAAAAGCGTCAGCTGGTGCACGAACTGTGCGAGGTGTTTGGCGTGGAGTCCGTATCCTACGACAAGGAGCCCAATCGCAATGTGGTGGCCACAGCACACAAGGAGCGCTGCTGGTTGCCTGCCACTAGTATCATGGAGGTCCTGGCACGTGAATCTGGACAGCGTCGTGTTCCGGTGCCCAGCAACAATGCCTGGAGTCTCAAAAAGTAG
- Protein Sequence
- MAEYWQQQQQQQQQQQQQLTNGAANVPAVHNESAAACNGGNAAASGNNNNYVNFNQFITQHNLASSSYSIGGGGGAFGLTPSGSSNSSNTANNSSNGSGSGSSNSNSFGGQFFGYQNGAGGNNYQGTGQAYSNLYSPFGNNPFAASSGFDFSTSKLQATAPEFVPNFAKLSLTAAPATDPKTYNNNSHTATQPNSEAANHQEAANINQHQQQQQQRQPKPHGSNSRQQRRNDYRDERSERNEDRYDRRKPQKQQRYDNHRSNKRRDDWNRNRDRINGYTRAAEELDTSNSNDSAQPSPEKQQQPQQISPRRAPDNEKLSQREKLVRDIEQRRLECLVCVEQIKAHHGTWSCQNCYHVLHLKCTITWASSSKSAEGWRCPACQNVLEELPRDYLCFCGKLKNPPLTRNELAHSCGELCCRVEGCSHACTLLCHPGPCPPCQANVSRNCGCGRTSKLMQCAMKQQLQCESICDKPLNCSEHRCDQLCHAGKCEPCAELVEQHCHCGKQQREVQCTRESQDKRSYSCKECCGKPLPCGNHKCKDSCHAGACRPCKLSPTQITSCPCGKLPVPPEQRSSCLDAVPTCEGVCGKTLRCGKPAHPHQCASKCHLGQCPPCQKQTAVKCRCGHMDQLIKCRQLSTRADDARCKRRCTKKRSCGKHKCNVECCIDIDHACPLPCNRTLTCGKHKCDQPCHRGNCPPCYRSSFEELYCECGAEVIYPPVPCGTKKPICKRPCSRTHGCEHVPQHNCHAAASCPPCMMFTTKWCHGSHEQRKTIPCSQASFSCGLACGKPLACGRHKCIKPCHEGDCQQAGELCRQSCIKPRLLCGHKCAAPCHDNDCPETPCKELVEVQCECGNRKQNRSCQELAREHSRIATAQLASSMAEMSRGNYMELSEILAPGKTSKSNKTLDCNDECRLLERNRRLAIGLQSRNPETQLKSLTKYSEFLRGFAKRNPVLTKSVYETLSDLVKLAKESKQKSRSHSFPTMNREKRQLVHELCEVFGVESVSYDKEPNRNVVATAHKERCWLPATSIMEVLARESGQRRVPVPSNNAWSLKK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00472738;
- 90% Identity
- -
- 80% Identity
- -