Hhis005726.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Hirtodrosophila histrioides
Gene Symbol
-
Assembly
GCA_037075165.1
Location
JBAMCL010000334.1:1518860-1519376[+]

Transcription Factor Domain

TF Family
zf-LITAF-like
Domain
zf-LITAF-like domain
PFAM
PF10601
TF Group
Zinc-Coordinating Group
Description
Members of this family display a conserved zinc ribbon structure [3] with the motif C-XX-C- separated from the more C-terminal HX-C(P)X-C-X4-G-R motif by a variable region of usually 25-30 (hydrophobic) residues. Although it belongs to one of the zinc finger's fold groups (zinc ribbon), this particular domain was first identified in LPS-induced tumour necrosis alpha factor (LITAF) which is produced in mammalian cells after being challenged with lipopolysaccharide (LPS)[2]. The hydrophobic region probably inserts into the membrane rather than traversing it. Such an insertion brings together the N- and C-terminal C-XX-C motifs to form a compact Zn2+-binding structure [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 2.5e-14 3e-11 43.5 10.9 3 69 30 92 28 93 0.86

Sequence Information

Coding Sequence
ATGGCTAGCACAGAGAGTCTGGACGGCAGCGCCTGTGATTATAACGGCGTCTCTGCTGTGCCACAGGTGGGTCATCTGCCCACAGTGCCCCTTGAGTTTGTCTGCCCCGCctgccagcagctgcagacGAGCCGCGTGGAGCGCGAGGCGGTCACTTGCCTGCAGAAAATCACCTGCACCTTGAATTGGCTGCTTTGCTGCAATCCCATACGCTGGAACGGACGACATGACATCAATCACTACTGCAGCTCCTGCGGCTGCTTCATTGGACGCCACATCTCGCTGAGCTGGTACAAGCGCGCTTTGTTCCGCATGCAACGCTCTGAGGTCGAGGACAATGGACGCTGGCAGCGTTTCCGCAAGGTGGAGAAGGAGCAGCTGGACGAAAAGAAGCTGGGCAAGCAGCGTTCAGCTATCGAAGCTAAAGCTcagaaacaaaatgaatag
Protein Sequence
MASTESLDGSACDYNGVSAVPQVGHLPTVPLEFVCPACQQLQTSRVEREAVTCLQKITCTLNWLLCCNPIRWNGRHDINHYCSSCGCFIGRHISLSWYKRALFRMQRSEVEDNGRWQRFRKVEKEQLDEKKLGKQRSAIEAKAQKQNE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00587814; iTF_01323785; iTF_00803277; iTF_01321586; iTF_01556498; iTF_01326067; iTF_00804055; iTF_01328279; iTF_01320863; iTF_01549952; iTF_00482658; iTF_00552706; iTF_00576738; iTF_00500707; iTF_00577443; iTF_00607491; iTF_00522628; iTF_00557573; iTF_00499974; iTF_00514566; iTF_00597830; iTF_00620262; iTF_00517383; iTF_00521831; iTF_00616583; iTF_00486249; iTF_00544138; iTF_00549226; iTF_00560714; iTF_00596330; iTF_00567212; iTF_00610316; iTF_00498541; iTF_00542830; iTF_00495535; iTF_00518833; iTF_00502194; iTF_00528467; iTF_00535731; iTF_00574483; iTF_00535732; iTF_00593524; iTF_00535733; iTF_00583351; iTF_00599257; iTF_00525563; iTF_00497820; iTF_00565052; iTF_00511677; iTF_00497054; iTF_00499262; iTF_00511678; iTF_00513854; iTF_00553438; iTF_00559166; iTF_00570782; iTF_00506532; iTF_00531362; iTF_00508773; iTF_00479174; iTF_00569382; iTF_00585639; iTF_00579662; iTF_00537905; iTF_00534259; iTF_00471284; iTF_00576020; iTF_00523351; iTF_00608859; iTF_00558332; iTF_00507293; iTF_00510944; iTF_00589926; iTF_00562855; iTF_00584104; iTF_00519595; iTF_00595629; iTF_00509494; iTF_00614583; iTF_00472729; iTF_00554074; iTF_00521024; iTF_00556896; iTF_00538638; iTF_01322318; iTF_01326838; iTF_01324571; iTF_00603750; iTF_00487682; iTF_00515268; iTF_00518118; iTF_00564327; iTF_00472040; iTF_00474188; iTF_00575244; iTF_00481231; iTF_00581202; iTF_00611733; iTF_00536438; iTF_00601434; iTF_00484796; iTF_00496263; iTF_00530627; iTF_01325334; iTF_01570618; iTF_00804859; iTF_01327559; iTF_00806364; iTF_01356523; iTF_01320143; iTF_00337182; iTF_00602256; iTF_00586356; iTF_01555798; iTF_00542114; iTF_01549251; iTF_01551395; iTF_01559429; iTF_00475624; iTF_01555112; iTF_00526985; iTF_01553641; iTF_01552843; iTF_00534988; iTF_00551980; iTF_00561420; iTF_00582637; iTF_01558701; iTF_00599982; iTF_00494063; iTF_00513135; iTF_01560114; iTF_00549940; iTF_00563572; iTF_00491190; iTF_01554359; iTF_00617304; iTF_00551258; iTF_00567931; iTF_01552126; iTF_00572991; iTF_00540768; iTF_00493318; iTF_01557231; iTF_00584849; iTF_00598555; iTF_00589226; iTF_00916859; iTF_00919559; iTF_00920334; iTF_00914993; iTF_00915895; iTF_00917722; iTF_00918720; iTF_00901911; iTF_00832582; iTF_00554748; iTF_00545650; iTF_00510211; iTF_00568647; iTF_00587079; iTF_00502921; iTF_00479852; iTF_00532784; iTF_00520305; iTF_00473459; iTF_00559892; iTF_00516668; iTF_00544894; iTF_00477024; iTF_00547040;
90% Identity
iTF_00587814; iTF_00804055; iTF_00482658; iTF_00552706; iTF_00576738; iTF_00500707; iTF_00577443; iTF_00607491; iTF_00522628; iTF_00557573; iTF_00499974; iTF_00514566; iTF_00597830; iTF_00620262; iTF_00517383; iTF_00521831; iTF_00616583; iTF_00486249; iTF_00544138; iTF_00549226; iTF_00560714; iTF_00596330; iTF_00567212; iTF_00610316; iTF_00498541; iTF_00542830; iTF_00495535; iTF_00518833; iTF_00502194; iTF_00528467; iTF_00535731; iTF_00574483; iTF_00535732; iTF_00593524; iTF_00535733; iTF_00583351; iTF_00599257; iTF_00525563; iTF_00497820; iTF_00565052; iTF_00511677; iTF_00497054; iTF_00499262; iTF_00511678; iTF_00513854; iTF_00553438; iTF_00559166; iTF_00570782; iTF_00803277; iTF_00589926; iTF_00562855; iTF_00595629; iTF_00554074; iTF_00556896; iTF_00579662;
80% Identity
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