Basic Information

Insect: Hirtodrosophila confusa
Gene Symbol: ken1
Assembly: GCA_035043065.1
Location: JAWNNI010000213.1:8620543-8622879[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.44 36 5.6 5.9 3 23 243 263 241 263 0.96

2 12 0.0014 0.12 13.4 1.4 1 23 269 294 269 294 0.92

3 12 2.1e-05 0.0017 19.1 0.8 3 23 303 326 302 326 0.93

4 12 0.00031 0.026 15.4 4.1 1 23 336 358 336 358 0.97

5 12 0.00025 0.02 15.8 1.8 2 23 366 387 365 387 0.96

6 12 0.0082 0.68 11.0 0.5 1 23 393 415 393 415 0.97

7 12 0.044 3.6 8.7 3.5 1 23 421 444 421 444 0.97

8 12 0.022 1.8 9.6 4.1 1 23 450 472 450 472 0.95

9 12 0.011 0.86 10.6 2.3 2 23 479 500 478 500 0.96

10 12 0.0002 0.016 16.1 0.8 1 23 583 606 583 606 0.96

11 12 0.011 0.89 10.6 3.1 1 23 612 634 612 634 0.95

12 12 2.1e-05 0.0017 19.2 4.0 3 23 642 662 640 662 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.44	36	5.6	5.9	3	23	243	263	241	263	0.96
2	12	0.0014	0.12	13.4	1.4	1	23	269	294	269	294	0.92
3	12	2.1e-05	0.0017	19.1	0.8	3	23	303	326	302	326	0.93
4	12	0.00031	0.026	15.4	4.1	1	23	336	358	336	358	0.97
5	12	0.00025	0.02	15.8	1.8	2	23	366	387	365	387	0.96
6	12	0.0082	0.68	11.0	0.5	1	23	393	415	393	415	0.97
7	12	0.044	3.6	8.7	3.5	1	23	421	444	421	444	0.97
8	12	0.022	1.8	9.6	4.1	1	23	450	472	450	472	0.95
9	12	0.011	0.86	10.6	2.3	2	23	479	500	478	500	0.96
10	12	0.0002	0.016	16.1	0.8	1	23	583	606	583	606	0.96
11	12	0.011	0.89	10.6	3.1	1	23	612	634	612	634	0.95
12	12	2.1e-05	0.0017	19.2	4.0	3	23	642	662	640	662	0.97

Sequence Information

Coding Sequence: ATGGAAGAGGGAAGTCAAATCTCCATTCACGCAATATGCCGCACTTGCTTGACAAACATGCAACACGTTGTCGCCTACGATCTGTTTGCGGTTCCGGGTCTGGCCAAGAAACTCTGTGTCTGCACCTCACTCTCAGTGGAACAGCAGGATGGGTTCCCGAAAAATCTTTGCACCATTTGTTACACCAAGCTAAACGATTTACATGAATTTCAGAAGCAATGCGTGGACTCCGTGCAAAGGTTAAAGGACATGGTGACCAACAATTACTTTATTAAACATGACAATTTTGACGAGCTGAACGTTGCGTCGCAGGAGCCTGATATGCCTGTCGAGGAAGAGGACCGCAACTTTGATCCGCTACAGAATACCAAAATAGAGATAATTGAGAATGAGGAGGATGTTTTTAAAATGCTCGAAGTTGTTGACAAAGAAGCAGATGAAGTGGAGAAGGTGACCTGCAGTGGCAGTGACATCGATAACGACAATGATGATGTCGTGGAGTTTAAAGCGAACAGCAGTGACTCCGACGACGCTATGCCCTTGTCACGTCTACGGTGTAATACAAGAGCTACAAAGCccaagaaaaaagaaaattctgTAAATAATGAAGAATTCTCCGAGTCCTTGAGCTCTGAATCTGACTATGATGAAGATGATAAGCACAAATCAAAACCAAAACGAAAGCGTATTTCGGCCGCTGAGCGTCACCTGCATAAACTAATCGACTGTCACATTTGCCATCAAAAGTTCAAGAAAGCTATTCGATACGACGAGCACATGAAACATCATAACGATCTGTTGCCATTCCAGTGCACTGTGGAAACATGCAAGAAGGGCTTTACGACAGCCGCTGGTCTGCGACATCATGTGGATCACGCACATTCGGAACTCTGCGATCTTCAGGCCTGCACTGTAGAAGGATGCGACAAGTCATTCCCGCGTGCTCGAATGCTTACACATCACATGAAAAAGGTTCATAAAATTACCAAACCTGAGGTCCGTGATCATCCCTGTACGGAATGCGACAAAGTATTCCGATGCCCAACGGCGCTTAAAAAACACATGTATAAACACACTGGTGAGGAGTTGCCTATTTCGTGTAACATCTGTAACAAGCGATTTCACATAAACAGTGAACTCAGAGACCATCTATTGCGCCATGCGGGCGTTAAAAATCATGTGTGTCCCTACTGTGGTGTGGGCAAAACTACTCGGCAGGAGTGGAACAAGCACATATTGACTCACACCAAGGAAAAACAGTTCCAGTGTCGCCAGTGCGATCATTCCTCCCACAACAAGCAGGCTCTATCCAACCACGTCAAAGTGGTGCACATGAAGATTAAGAACTTTGCCTGCCAGTACTGCGGTAAGACCTTTGGGAAATCGCACGCATGCAAGATCCACGAGAGACTTCATACTGGCGAGAACTGTTGCGAGTGCAAGATCtgtggaaaaatatttcttttcgAGAAGAGATTGACCAAGCATTTGCAGATTCATGAGAAGCGCGATAATCCAACGACTACAGCCATTTCAAAATCGACAGTCAATAAGGATGGCAACGTGGAGTTGACAAAAGCAGTGGATTCGAAACCCATGCCTGCAGTCGCTGCCAAGCCAAAGAATTCACATAGAGTAGAGCGTGTAGATATCTCTCAACTGGCGGGCACCGCTGCCAATCCCATTCCATCAGTATCGGTGCCTTCCTGGGCGCCACAAATCAACTTCACAAAGAAAGAAGGTCAGCACATTTGCCCGGGCTGTGGACGAGGCTTTAACCACATTGGTAATATGAAGCTGCACTATAAGGTTATACATGAAAAGATCAAGGACTTTGCCTGCCGTTTCTGCCCTAAGCGCTTTGGCAAAGCCCAATACCTTCGTCATCATGAATATACGCATACAGGCGAGAGGCCGTACGGCTGCAAAATATGCGATAAGCATTTTAGCCATGGCTCATCGTTAAGAAAGCATATGATTTCACACAATAGACCTCCAAAAGTGCCAAAGGCTCAAAAAACCTCTTCTAAAACTAAAGATCTTCAGAGGCCAAAAATCGAACTGAACAAGCGTCCACCGAAGAACTATGAACAGTATCAAGATCCAGCTGCAGAACGGGCGGCTGCTACAGCTGAATTGCTTGCTCAGCAGCTGGAGGAGAGTGAAGCTAAGCGGAAGGCGGAGGTTAAAATTCGTAAGATTCAGGAGGCCGCATGTGAGCAGCTTCAGAAGCtgcaaaaagaacaactgaTCGATAAGATACCCCAtgatagtttttatatacatagttcCGAATGCGGTATTAGTGTGGATTCCCTCAACACAGATCAGGTGTAA
Protein Sequence: MEEGSQISIHAICRTCLTNMQHVVAYDLFAVPGLAKKLCVCTSLSVEQQDGFPKNLCTICYTKLNDLHEFQKQCVDSVQRLKDMVTNNYFIKHDNFDELNVASQEPDMPVEEEDRNFDPLQNTKIEIIENEEDVFKMLEVVDKEADEVEKVTCSGSDIDNDNDDVVEFKANSSDSDDAMPLSRLRCNTRATKPKKKENSVNNEEFSESLSSESDYDEDDKHKSKPKRKRISAAERHLHKLIDCHICHQKFKKAIRYDEHMKHHNDLLPFQCTVETCKKGFTTAAGLRHHVDHAHSELCDLQACTVEGCDKSFPRARMLTHHMKKVHKITKPEVRDHPCTECDKVFRCPTALKKHMYKHTGEELPISCNICNKRFHINSELRDHLLRHAGVKNHVCPYCGVGKTTRQEWNKHILTHTKEKQFQCRQCDHSSHNKQALSNHVKVVHMKIKNFACQYCGKTFGKSHACKIHERLHTGENCCECKICGKIFLFEKRLTKHLQIHEKRDNPTTTAISKSTVNKDGNVELTKAVDSKPMPAVAAKPKNSHRVERVDISQLAGTAANPIPSVSVPSWAPQINFTKKEGQHICPGCGRGFNHIGNMKLHYKVIHEKIKDFACRFCPKRFGKAQYLRHHEYTHTGERPYGCKICDKHFSHGSSLRKHMISHNRPPKVPKAQKTSSKTKDLQRPKIELNKRPPKNYEQYQDPAAERAAATAELLAQQLEESEAKRKAEVKIRKIQEAACEQLQKLQKEQLIDKIPHDSFYIHSSECGISVDSLNTDQV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00803072;
90% Identity: iTF_00805420;
80% Identity: -