Hcon021603.1
Basic Information
- Insect
- Hirtodrosophila confusa
- Gene Symbol
- DMRT2_1
- Assembly
- GCA_035043065.1
- Location
- JAWNNI010000242.1:12686320-12688315[-]
Transcription Factor Domain
- TF Family
- DM
- Domain
- DM domain
- PFAM
- PF00751
- TF Group
- Zinc-Coordinating Group
- Description
- The DM domain is named after dsx and mab-3 [2]. dsx contains a single amino-terminal DM domain, whereas mab-3 contains two amino-terminal domains. The DM domain has a pattern of conserved zinc chelating residues C2H2C4 [1]. The dsx DM domain has been shown to dimerise and bind palindromic DNA [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 6.9e-24 3.4e-20 72.1 16.3 1 47 17 63 17 63 0.99 2 2 1.7 8.4e+03 -2.8 0.1 29 46 113 130 111 131 0.64
Sequence Information
- Coding Sequence
- ATGCCAATGAACGtcaccagcagcagccccaAGGATCGCCGCCTGCTGCGCACCCCCAAGTGTGCACGCTGCCGCAACCACGGCGTCATCTCGTGCGTCAAGGGCCACAAGAAGCTGTGCCGCTGGCGCGAGTGCTGCTGCCCCAACTGCCAGCTGGTGGTCGATCGCCAGCGCGTGATGGCCGCTCAGGTGGCGCTGCGGCGCCAGCAAACCATGGAGGCACTGgaggccagcagcagcgcccaCAGCGATGAGGAGCTCTTACCGAGCAGTACCAACACGAAccccagcaccagcaccagctccCGCCCCGCATTGCCAGTGACGCCCACCAAATGCAGCCCCATGTCGGCCCACACACTGCGCACGCGCCAGGCTCTGATTGCCCAGAAGCGCATCTACAAGCAGCGTCTGCGCAACCTGCAGCAGTCCACGCTGCACATCACCGCGGCCATGGAAGAGTACAAGCAGCGCTTTCCCACGTTCAACTCGCCGCTGCTGGAACGGATGCGCAAGCGACGCGCGTTCGCTGATCCGGAACTGAACTACGCAATGGATACATCGCTACTTGGCAGCTCCGCCTGTGGCGGCACAACAGTTCCTTTGGCTCCTTTGGCCACGCCACCAGCAGGCATTGGTAACGCCTTTTATGATATATTGGGCAAtgccgccgccgtcgccgccgctgctgctgctgctgcagctgttgcgcAACAGAAACATCAGCAACAGGAGGCATATCAATCAGTGCCGCTCTTTACACACACGCCTACGCCCACAGTGAAGAAGCCCAAGCTGAGTTTCTCAATTGAGTCGATAATTGGTATCAGCACGTAG
- Protein Sequence
- MPMNVTSSSPKDRRLLRTPKCARCRNHGVISCVKGHKKLCRWRECCCPNCQLVVDRQRVMAAQVALRRQQTMEALEASSSAHSDEELLPSSTNTNPSTSTSSRPALPVTPTKCSPMSAHTLRTRQALIAQKRIYKQRLRNLQQSTLHITAAMEEYKQRFPTFNSPLLERMRKRRAFADPELNYAMDTSLLGSSACGGTTVPLAPLATPPAGIGNAFYDILGNAAAVAAAAAAAAAVAQQKHQQQEAYQSVPLFTHTPTPTVKKPKLSFSIESIIGIST
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00490796;
- 90% Identity
- iTF_00805202;
- 80% Identity
- -