Basic Information

Insect: Hirtodrosophila alboralis
Gene Symbol: ken1
Assembly: GCA_035043045.1
Location: JAWNNH010000259.1:58-2301[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.0008 0.055 14.1 3.6 3 23 233 253 231 253 0.96

2 12 0.006 0.42 11.3 0.1 1 23 259 284 259 284 0.91

3 12 0.14 10 7.0 0.1 3 23 293 316 291 316 0.93

4 12 0.0012 0.079 13.6 1.4 2 23 329 350 328 350 0.96

5 12 1.2e-05 0.0008 19.8 0.6 1 23 357 379 357 379 0.98

6 12 0.0069 0.48 11.1 0.1 1 23 385 407 385 407 0.98

7 12 0.012 0.8 10.4 2.2 1 23 413 436 413 436 0.97

8 12 0.0087 0.6 10.8 3.9 1 23 442 464 442 464 0.96

9 12 0.0011 0.073 13.7 2.9 2 23 471 492 470 492 0.96

10 12 0.0001 0.0069 16.9 1.6 1 23 582 605 582 605 0.95

11 12 0.013 0.92 10.2 0.7 1 19 611 629 611 633 0.95

12 12 2.3e-06 0.00016 22.0 1.1 1 23 639 661 639 661 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.0008	0.055	14.1	3.6	3	23	233	253	231	253	0.96
2	12	0.006	0.42	11.3	0.1	1	23	259	284	259	284	0.91
3	12	0.14	10	7.0	0.1	3	23	293	316	291	316	0.93
4	12	0.0012	0.079	13.6	1.4	2	23	329	350	328	350	0.96
5	12	1.2e-05	0.0008	19.8	0.6	1	23	357	379	357	379	0.98
6	12	0.0069	0.48	11.1	0.1	1	23	385	407	385	407	0.98
7	12	0.012	0.8	10.4	2.2	1	23	413	436	413	436	0.97
8	12	0.0087	0.6	10.8	3.9	1	23	442	464	442	464	0.96
9	12	0.0011	0.073	13.7	2.9	2	23	471	492	470	492	0.96
10	12	0.0001	0.0069	16.9	1.6	1	23	582	605	582	605	0.95
11	12	0.013	0.92	10.2	0.7	1	19	611	629	611	633	0.95
12	12	2.3e-06	0.00016	22.0	1.1	1	23	639	661	639	661	0.98

Sequence Information

Coding Sequence: ATGAGCACAATAGTTCCGTACTCTGTTCATTCAATATGCCGTATTTGCCTAGTATATCTCGAGAGCAGCACAATATATGatctgtttttgttgccagATCTGGTCAAGACCTTTACAGTTTGCACGTCTCTGCTGGCAGTTCCTGACGATGGTTACCCCAGGAATCTCTGTGCCAACTGCTATGCCAGATTAAATGATATCCATGATTTTCAGAAGCTGTGCGTAGCCTCGGTGGAACGATTTAAGCAAATGGTGGCCAATGGAGTCGTCGTCCTCAATGCCAACACATTTGATCTGTTCGAACCGCTGCCGGGTGCCAGCAACGAGCCTGAATTGGCGGTCAAAGATGAGCAGCCTAACAATGATTACGATCCGTTATTAAGTCATAAATTGGAGCTAATTGATAACGAAGAGgatgtatttaaaatgctgGAGAATGTTGACAAAGAGGTTGAAGATGTGTCTACGGTTAAACAGCAACGGCGgaataagcaaaattttagCGATTGCTCAATGTCATCGTCTACGTCGGAATGCAGCAGCATTAGTGAGGATGATATACCATTGGCACAACGTTTGCAGGACCATCACAGCGAAACGGATTCCCAACTATCAACGTTTGCTAATCGCTCCCAATCAAAGACGAAACGTAAACGAATTCCTGCAGCACAGCGTCATCTGCATCGTATTATTAACTGCCAAATATGCCAGCAGAAATTTAAGAAACAATCCAACTATGATGAGCACATGAAACACCATAACGAATTGTTGCCCTTTCAGTGTAACGTTGAGGCTTGCAAGAAGGGTTTCACCACAGCGGCTGCACTGCGTCTGCATGTGGATTATGCGCACACAAAGTGTGCCGATGCAATACCCTGCACTGTCGAGGGCTGTAAGCTATTATTCCCACGCATGCGATTGCTGACCATTCATCTCAAGAAGGTGCATAATATGTCCCGGGCGAGTGTGCCGCGTGTGGAGCAGCCCTGCAGCGAGTGCGGCATGCGTTTCCGTTGTCCCGTGGCACTTAAGAAGCATATGTACAAGCATACGGGTCAACAGTTGCCCTATCCGTGCAACATATGTGGCAAAGGCTTTCATATAAACAGCGCTCTGAAGAATCATTTACTGCGGCATGCTGGCATCAAAAATTATGTGTGTCCCTATTGTGGTGTGGGCAAAACAACGCGGCAGGAGTGGAGTAAACACATACTCACCCACACCCAGGAGAAGATGTTCAAGTGTCAGATCTGTGagcatgccacacacacaaagcgaGCCCTCGACAATCATATTAAGATTGTGCACGAAAAGATTAGAAATTATGCCTGCCAATATTGTGGCAAAACCTTTGGCAAATCGCATGCCTGCAAAATTCACGAGATGACGCACACCGGTGAGAAGCGCTGTGAGTGCAAGGTATGTGGCAAGAAGTTTCTCTACACCGAGAGCCTAACCAAGCATCTGAAAATACACGAGAAGAGCGCAGAGCGTGCCATTGAAACGTATCGGCAGCGACAGGTGGAACAGCAGCTGCCGGAAAGTGTAAATGCCGAGACAAATGATACGGATCAACTGTTGAAAGTGTGTGCCGAGTCTGTGGCCACCATACCGCGTGATCCACGACGTGTGGAACGTGTAGACATTGCCCAACTGGCCGGCACCGTTGTGAATCCCATACCAGCTGTCTTAGTACCGTCGAATGCGCCAACTCAAATGAATTTTGTACAAAAGGAGGGCATGCATTTTTGTCCGGGCTGTAATCAGGGCTTCAACAATTTGGGCAACATGAAGCGACACTACAAGAGCGTCCATGAGAAGGTCAAAGACTTTGAGTGTCGCTTCTGCGCGCGACGCTTTGCCAACTCACAATCCCTGAAGCAACACGAATGGATACACACGGGCGAAAAGCCGTATGTGTGCAAAACGTGTGGCACACATTTTCGCCAGGAGGCAGCATTAATACGCCACCAAAAGGTGCACGATGCGAAACCCGCAAAGCCAGCAAAACCTCCAAAGCAAATCACTGAAAAGTTTCGCCAAAAGGAATtgcaaaaatgtgaaaaacgTCGCAAGGTTGAAGCGTTACGTCTGAAAATTGCTGAAGCCGCCAAGGAGGAGCTACAGGAACTGGCCATACAGCGTGTACtggaaaagaaacaaaatacatatgaaCAATATCAGGCAGCAGCGGCTGCGGCCGCGGAAAGTGCATCAGAGGAGCCAGACAACAAAGCTAGCtga
Protein Sequence: MSTIVPYSVHSICRICLVYLESSTIYDLFLLPDLVKTFTVCTSLLAVPDDGYPRNLCANCYARLNDIHDFQKLCVASVERFKQMVANGVVVLNANTFDLFEPLPGASNEPELAVKDEQPNNDYDPLLSHKLELIDNEEDVFKMLENVDKEVEDVSTVKQQRRNKQNFSDCSMSSSTSECSSISEDDIPLAQRLQDHHSETDSQLSTFANRSQSKTKRKRIPAAQRHLHRIINCQICQQKFKKQSNYDEHMKHHNELLPFQCNVEACKKGFTTAAALRLHVDYAHTKCADAIPCTVEGCKLLFPRMRLLTIHLKKVHNMSRASVPRVEQPCSECGMRFRCPVALKKHMYKHTGQQLPYPCNICGKGFHINSALKNHLLRHAGIKNYVCPYCGVGKTTRQEWSKHILTHTQEKMFKCQICEHATHTKRALDNHIKIVHEKIRNYACQYCGKTFGKSHACKIHEMTHTGEKRCECKVCGKKFLYTESLTKHLKIHEKSAERAIETYRQRQVEQQLPESVNAETNDTDQLLKVCAESVATIPRDPRRVERVDIAQLAGTVVNPIPAVLVPSNAPTQMNFVQKEGMHFCPGCNQGFNNLGNMKRHYKSVHEKVKDFECRFCARRFANSQSLKQHEWIHTGEKPYVCKTCGTHFRQEAALIRHQKVHDAKPAKPAKPPKQITEKFRQKELQKCEKRRKVEALRLKIAEAAKEELQELAIQRVLEKKQNTYEQYQAAAAAAAESASEEPDNKAS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00558090;
90% Identity: -
80% Identity: -