Basic Information

Insect: Hirtodrosophila alboralis
Gene Symbol: -
Assembly: GCA_035043045.1
Location: JAWNNH010000305.1:356593-367010[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 2.7e-05 0.0019 18.7 2.1 1 23 305 327 305 327 0.97

2 18 9.1e-06 0.00063 20.2 0.4 1 23 333 355 333 355 0.97

3 18 0.0013 0.092 13.4 0.9 1 23 361 383 361 383 0.95

4 18 1.9e-05 0.0013 19.2 3.1 1 23 389 411 389 411 0.97

5 18 4.4e-05 0.003 18.0 4.7 1 23 417 439 417 439 0.99

6 18 8e-05 0.0055 17.2 5.7 1 23 445 467 445 467 0.97

7 18 3.9e-07 2.7e-05 24.5 4.3 1 23 473 495 473 495 0.98

8 18 1.4e-07 9.6e-06 25.9 2.4 1 23 501 523 501 523 0.97

9 18 8.2e-05 0.0056 17.2 6.7 1 23 530 552 530 552 0.97

10 18 0.00014 0.0098 16.4 6.5 1 23 558 580 558 580 0.98

11 18 1.3e-05 0.00087 19.7 4.5 1 23 586 608 586 608 0.98

12 18 9.2e-06 0.00063 20.2 8.1 1 23 614 636 614 636 0.98

13 18 7.5e-06 0.00052 20.5 7.6 1 23 642 664 642 664 0.97

14 18 8.4e-07 5.8e-05 23.4 7.7 1 23 670 692 670 692 0.98

15 18 0.00026 0.018 15.6 9.5 1 23 698 721 698 721 0.95

16 18 9.3e-05 0.0064 17.0 0.9 1 23 727 749 727 749 0.98

17 18 0.001 0.07 13.7 3.4 1 23 759 781 759 781 0.97

18 18 1.2e-05 0.0008 19.9 1.6 1 23 787 810 787 810 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	2.7e-05	0.0019	18.7	2.1	1	23	305	327	305	327	0.97
2	18	9.1e-06	0.00063	20.2	0.4	1	23	333	355	333	355	0.97
3	18	0.0013	0.092	13.4	0.9	1	23	361	383	361	383	0.95
4	18	1.9e-05	0.0013	19.2	3.1	1	23	389	411	389	411	0.97
5	18	4.4e-05	0.003	18.0	4.7	1	23	417	439	417	439	0.99
6	18	8e-05	0.0055	17.2	5.7	1	23	445	467	445	467	0.97
7	18	3.9e-07	2.7e-05	24.5	4.3	1	23	473	495	473	495	0.98
8	18	1.4e-07	9.6e-06	25.9	2.4	1	23	501	523	501	523	0.97
9	18	8.2e-05	0.0056	17.2	6.7	1	23	530	552	530	552	0.97
10	18	0.00014	0.0098	16.4	6.5	1	23	558	580	558	580	0.98
11	18	1.3e-05	0.00087	19.7	4.5	1	23	586	608	586	608	0.98
12	18	9.2e-06	0.00063	20.2	8.1	1	23	614	636	614	636	0.98
13	18	7.5e-06	0.00052	20.5	7.6	1	23	642	664	642	664	0.97
14	18	8.4e-07	5.8e-05	23.4	7.7	1	23	670	692	670	692	0.98
15	18	0.00026	0.018	15.6	9.5	1	23	698	721	698	721	0.95
16	18	9.3e-05	0.0064	17.0	0.9	1	23	727	749	727	749	0.98
17	18	0.001	0.07	13.7	3.4	1	23	759	781	759	781	0.97
18	18	1.2e-05	0.0008	19.9	1.6	1	23	787	810	787	810	0.96

Sequence Information

Coding Sequence: ATGCAGCACGTGAGCGCTGCCAGTTCGGCACCTTCGGTGGTATCTGCACCGGTGGTGACCTCTGGCGGTGGCACCACCataacagcggcagcagcactACCCCTACTCCCCCTGCCGCTATCCACCAACAAAGGAAtcgatcatcatcatcatcatcatcagcagcagcaacaacatcaacagcagcagcaacaacatcaacagcagcaacacaatcagcagcagcaacataataatcatcatcataataatAGTAAAGAGGATAATAAACATCACGGCATTGAAATGTATAAAGTTAACATTGAGGATATATCACAATTGTTTACGTATCACGAGGTCTTTGGCAAAATCCATGGCGATGTGGTGAATCATGTGGCGGCGGTGCATGGCAGCCAGTTGCCGCCACCGCaattgccgccgccgccgccactgccgccaacaacaacaacgacagcaacatCGACGCATGCGGCAAgcgcagctgcagcagcagcggcggcgtcCACAAATAATGCAGCGGTTGCTGCTGTAATGGCCTCGGccaatgcagcagcagcggctgcagcagctgccacagcggcagcagcaacagcacagcaacaacaacagcaacaacagcagcagcagcaacaacaacagcagcagcagcaacaacagcagcagcaacagcagcaacaagtgcCTGCCACAAGCACAAATGCTGccacagctgcaacaacaacaagcagctcAAGTAGCAATGGTGCTgctgcggcggctgctgcagctgctgctgctgttgcaacaacaacaacatcaacaacaactggTGAGTTGCTAATGCCGAAAATGGAAGGCGGCCTTCATGGCATCGATGGTCAAGTTGCAAATGTTGCATTGGCGCCGGATGGCACACCAATTGCAACGGGCACCCATGTCTGTGACATCTGTGGCAAGATGTTTCAATTTCGTTATCAATTAATTGTGCACCGTCGCTACCATAGCGAGCGCAAGCCGTTTATGTGTCAGGTGTGCGGTCAGGGTTTTACCACATCCCAGGATTTAACGCGTCATGGCAAGATCCATATTGGCGGCCCAATGTTCACCTGCATTGTGTGCTTCAATGTGTTTGCCAATAATACAAGCTTGGAGCGGCATATGAAGCGCCATTCAACGGATAAACCATTTGCCTGCACCATTTGCCAAAAGACTTTCGCCCGCAAAGAGCATCTGGATAATCATTTTCGTTCCCATACGGGCGAAACGCCATTTCGTTGCCAATACTGCGCCAAGACGTTTACACGCAAGGAGCATATGGTCAATCATGTGCGCAAACACACGGGTGAGACGCCACATCGTTGCGATATTTGTAAGAAGTCCTTTACGCGCAAGGAACACTATGTTAACCACTACATGTGGCACACTGgTCAAACACCGCATCAGTGCGATGTCTGCGGCAAGAAATATACGCGCAAGGAGCACCTAGCCAACCATATGCGCTCCCACACCAACGAGACGCCGTTCCGTTGCGAAATCTGCGGCAAGAGCTTTAGCCGCAAGGAGCACTTCACCAATCACATACTCTGGCATACAGCAGGCGAGACGCCGCATCGGTGCGACTTCTGCTCGAAGACGTTTACACGGAAGGAGCATTTGTTAAATCACGTGAGACAACATACGGGAGAGTCGCCGCATCGCTGTTCATATTGCATGAAGACGTTTACACGCAAGGAGCATCTGGTTAATCATATACGCCAGCACACGGGTGAGACACCGTTCAAGTGCACGTACTGCACAAAAGCGTTTACACGCAAAGATCACATGGTTAATCATGTACGGCAACATACAGGCGAATCGCCGCATAAGTGCACATATTGCACGAAGACCTTTACAAGGAAGGAGCATCTCACGAACCATGTCAGGCAGCATACGGGCGATTCGCCGCATCGTTGTAGCTACTGCAAGAAGACCTTTACGAGGAAGGAGCATCTGACGAATCATGTGCGTTTGCATACTGGAGATTCGCCCCATAAATGTGAATATTGCCAGAAGACGTTCACACGCAAGGAGCATCTAAATAATCATATGAGGCAACATTCATCCGATAATCCGCATTGTTGCAACGTCTGCAACAAGCCCTTCACACGCAAGGAGCATCTAATTAATCATATGTCACGCTGTCACACTGGCGATCGTCCATTCACCTGTGAGACATGCGGCAAATCGTTTCCCCTTAAAGGCAATCTTCTATTCCATCAGCGCAGCCATACCAAGGGTCAGGAATGTGAGCGTCCATTTGCCTGCGAGAAGTGCCCCAAGAATTTCATATGCAAAGGTCACTTGGTCTCGCACATGCGCTCCCATTCGGGCGAGAAACCGCACGCGTGCACACTGTGCAGCAAGGCTTTCGTCGAGCGCGGCAATTTGAAGCGCCACATGAAGATGAATCATCCGGATGCTATGATGCCGCCACCACCCGTGCATCCGCATCCGCAAATACCGGCTGGTGTGCTGACCCAAGTCAAGCAGGAAGTGAAACCGATCATAATTCCCCATCATTCGGCGACAACCACAATGCACACCATACAACAGATTACAGCGGGCGCTGCAGCGGCTGGCGCCGGTGCCGTCCAGTTAACGCCGGGCTTGGTGCCGCTGGTCACCAGCACGCTCATGTCACACAATGCCCAGCAGACgcagaagcaacagcagcaggttgCCGCCGCAGTTGCGGCACAGCAGCAAGCggctgcagcggcagcggcacaACAGCAAGCCGCCGCAGCGGCCGCGGCACAacagcaggcagcagcagcggcagcgcatcaacagcatcagcaacaggttgctgcacagcagcaacaacagcaacagcaggcgGCCGTTGCAgcccatcagcagcaacagcaacagttgcagcaacaacaattgctacAATTGTCCATACAACAGGCGgcgcatcatcatcaacatcaacaacagcagcagcagcagcaacaacaacagcaacagcagcagcaacatcatcagcagcagcaacagcaggcgCATCAACAGGCgccgccacagcagcagcaacaacagccgccACCACAGGTGCCCATCGCATTGATAAGTGATCCAAGTGCATTGGCGCGTGCCGccatgcaactgcaacatttgCCCACAAATGTGGAACAACATCCGGTGGTTTACTAA
Protein Sequence: MQHVSAASSAPSVVSAPVVTSGGGTTITAAAALPLLPLPLSTNKGIDHHHHHHQQQQQHQQQQQQHQQQQHNQQQQHNNHHHNNSKEDNKHHGIEMYKVNIEDISQLFTYHEVFGKIHGDVVNHVAAVHGSQLPPPQLPPPPPLPPTTTTTATSTHAASAAAAAAAASTNNAAVAAVMASANAAAAAAAAATAAAATAQQQQQQQQQQQQQQQQQQQQQQQQQQQQVPATSTNAATAATTTSSSSSNGAAAAAAAAAAAVATTTTSTTTGELLMPKMEGGLHGIDGQVANVALAPDGTPIATGTHVCDICGKMFQFRYQLIVHRRYHSERKPFMCQVCGQGFTTSQDLTRHGKIHIGGPMFTCIVCFNVFANNTSLERHMKRHSTDKPFACTICQKTFARKEHLDNHFRSHTGETPFRCQYCAKTFTRKEHMVNHVRKHTGETPHRCDICKKSFTRKEHYVNHYMWHTGQTPHQCDVCGKKYTRKEHLANHMRSHTNETPFRCEICGKSFSRKEHFTNHILWHTAGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHRCSYCMKTFTRKEHLVNHIRQHTGETPFKCTYCTKAFTRKDHMVNHVRQHTGESPHKCTYCTKTFTRKEHLTNHVRQHTGDSPHRCSYCKKTFTRKEHLTNHVRLHTGDSPHKCEYCQKTFTRKEHLNNHMRQHSSDNPHCCNVCNKPFTRKEHLINHMSRCHTGDRPFTCETCGKSFPLKGNLLFHQRSHTKGQECERPFACEKCPKNFICKGHLVSHMRSHSGEKPHACTLCSKAFVERGNLKRHMKMNHPDAMMPPPPVHPHPQIPAGVLTQVKQEVKPIIIPHHSATTTMHTIQQITAGAAAAGAGAVQLTPGLVPLVTSTLMSHNAQQTQKQQQQVAAAVAAQQQAAAAAAAQQQAAAAAAAQQQAAAAAAHQQHQQQVAAQQQQQQQQAAVAAHQQQQQQLQQQQLLQLSIQQAAHHHQHQQQQQQQQQQQQQQQQHHQQQQQQAHQQAPPQQQQQQPPPQVPIALISDPSALARAAMQLQHLPTNVEQHPVVY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00560429;
90% Identity: -
80% Identity: -