Halb003803.1
Basic Information
- Insect
- Hirtodrosophila alboralis
- Gene Symbol
- DMRT2
- Assembly
- GCA_035043045.1
- Location
- JAWNNH010000135.1:7434-9556[-]
Transcription Factor Domain
- TF Family
- DM
- Domain
- DM domain
- PFAM
- PF00751
- TF Group
- Zinc-Coordinating Group
- Description
- The DM domain is named after dsx and mab-3 [2]. dsx contains a single amino-terminal DM domain, whereas mab-3 contains two amino-terminal domains. The DM domain has a pattern of conserved zinc chelating residues C2H2C4 [1]. The dsx DM domain has been shown to dimerise and bind palindromic DNA [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 7.8e-24 2.5e-20 72.2 16.3 1 47 16 62 16 62 0.99 2 2 0.27 8.9e+02 0.0 0.0 7 21 78 92 75 96 0.80
Sequence Information
- Coding Sequence
- ATGCCAATGAACGTGACCAGCAGCTCCAAGGATCGTCGTTTGCTACGCACACCAAAGTGTGCACGCTGTCGCAATCATGGTGTCATCTCGTGCGTCAAAGGCCACAAGAAGCTGTGCCGCTGGCGGGAATGTTGTTGCCCCAATTGTCAGCTGGTTGTGGATCGCCAGCGTGTGATGGCCGCTCAGGTGGCACTGCGACGCCAACAGACCATGGAGGCCCTGGAGGCCAGCAGCTGTAGCAATCACAGCGATGAGGAGCtaagcagcagccacagcccCACATTGCCATTGACGCCAACCAAAGCCAGCTCCATGTCAGCTCATACATTGCGCACGCGCCAGGCTCTGATCGCCCAGAAACGCATCTACAAGCAGCGTCTGCGCAATCTCCAACAGTCCACACTGCACATTACCGCGGCCATGGAAGAATACAAGCAGCGCTTTCCCACGTTCAACTCACCACTGCTGGAACGGATGCGTAAGCGACGCGCGTTCGCTGATCCGGAACTGAACTATGCAATGGATACAACGCTGCTTGGCAGCTCCGGCTGCAGCAGTGGCTCAGCGGCTCCTTTGCCACCTTTGGCCACgccggcaacaacagcagctattGGTAACGCCTTTTATGATCTATTGGGTaatgccgctgccgctgctgcagctgcagccgttgcgcatcaacagcaacagcaacaggaggCATATCAATCAATGCCGCGTTTTACACACACGCCCATGCCAACGCCTACAGTGAAGAAGCCCAAGCTGAGTTTCTCAATTGAGTCGATAATTGGCATCAGCACGTAG
- Protein Sequence
- MPMNVTSSSKDRRLLRTPKCARCRNHGVISCVKGHKKLCRWRECCCPNCQLVVDRQRVMAAQVALRRQQTMEALEASSCSNHSDEELSSSHSPTLPLTPTKASSMSAHTLRTRQALIAQKRIYKQRLRNLQQSTLHITAAMEEYKQRFPTFNSPLLERMRKRRAFADPELNYAMDTTLLGSSGCSSGSAAPLPPLATPATTAAIGNAFYDLLGNAAAAAAAAAVAHQQQQQQEAYQSMPRFTHTPMPTPTVKKPKLSFSIESIIGIST
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00586693;
- 90% Identity
- -
- 80% Identity
- -