Hsem011444.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Hipparchia semele
Gene Symbol
Hr39
Assembly
GCA_933228835.1
Location
CAKOGE010000082.1:252545-265584[-]

Transcription Factor Domain

TF Family
SF-like
Domain
zf-C4|SF-like
PFAM
AnimalTFDB
TF Group
Zinc-Coordinating Group
Description
The ligand binding domain of nuclear receptor steroidogenic factor 1 (SF-1): SF-1, a member of the nuclear hormone receptor superfamily, is an essential regulator of endocrine development and function and is considered a master regulator of reproduction. Most nuclear receptors function as homodimer or heterodimers, however SF-1 binds to its target genes as a monomer, recognizing the variations of the DNA sequence motif, T/CCA AGGTCA. SF-1 functions cooperatively with other transcription factors to modulate gene expression. Phospholipids have been determined as potential ligands of SF-1. Like other members of the nuclear receptor (NR) superfamily of ligand-activated transcription factors, SF-1 has a central well conserved DNA binding domain (DBD), a variable N-terminal domain, a flexible hinge and a C-terminal ligand binding domain (LBD). [1, 8, 3, 11, 6, 5, 12, 10, 9, 2, 4, 7]
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 4 0.15 3.4e+03 -2.6 2.4 67 160 88 205 52 234 0.45
2 4 1 2.3e+04 -7.0 11.3 62 192 193 331 134 358 0.52
3 4 1.4e-08 0.00033 20.5 0.1 1 21 435 455 435 466 0.91
4 4 1.3e-65 2.9e-61 208.4 0.0 152 408 488 753 463 753 0.83

Sequence Information

Coding Sequence
ATGATGTCGACGAGCGAGGATGCCGTGAAAGTCGAAGGGGGGCATGTCTCCGTCACAACCATCAGCATGTCGGGTCCAGAGACAAGCAAGGGTCGTTTCTCGTACAGCTCGAGCGGCGTGCGCATCAGCGTGTCTTCCGAGCCCCACGATGAAGACTCCACTGATGCCGAGATCTCCAAAATCGACTTCACACAGCACCAATACGAGGTCAGCATGCGCAACAAAAAGAAGCGATCCTCGAGCGGGCAATGTGACCAAGCGGCCGAACAGGAGCGCCCCATGTCCTGGGAAGGGGAGCTGTCGGACTCCGAAATGGTCATCGATACCAGCGTCAACAACGATGAAAACAGCAGTTCGCTCGACCTGCAGTCGTCACGGGATTCCATCGACACGCTCCGCAACGTGACCATCAAGACAGAGCCGCTCAAGACAGAGGCCTTTCAGAGCCTGGACGACCAGCGCGTGTTGGACCTCAAGTACACCGTGCCCTTGCAGTCGCACCAACGGAGTCTTAGTATGAACAGGATATCAGTTCTAACGGACAACGCGTCGCTTAGTTTAGCAAGGCGGCCGTCTTCTCCCAGCAACAGTGCCAAGTCAGTCCACTCCGACCACTACGAGACGCCTTTACCACACAATCCCGAAGTTCAGAACTTGACCATCAAGAAAGAGACGCAGCTATCTGAGTTGAAATGTGAACCATCAGTGGGCATGGACAAGCTGTTGGGCCTGCACGGGTCACCGCTGTTGGGCAGGCTGCCCAGAGTGCAGTCCAGCGCCAGCACAGACTCCGCCGTGCATTCTATGTACACGCATAGCGTGTACAGCAGCCCGTCGGCCAGCCCGCGTCCCTCGCGCCACTACACGCCGTCCCTGTCGCGCAACAACAGCGACGCGTCGCACTCCTCGTGCTACTCCTACAGCTCCGAGTTCTCGCCCACACATTCCCCTGTCCAGAGTCGACATCCGCACGTGGTATACCGTGAGGCAGCGGTGTTCCCGGCGTCGCCCGCGCACGACGACGACACTGACACAACAGACGATCGACTCCACCACCACCAGGGCATCAGCAGACAACAGCTCATCAACAGTCCATGCCCAATCTGCGGCGACAAGATAAGCGGTTTCCACTACGGCATATTCTCGTGCGAGTCGTGTAAAGGCTTCTTCAAGAGAACTGTGCAGAATCGCAAGAACTACATGTGCCTTAGAGGCGGCAACTGTCCCGTCACCGTGGCCACGAGGAAGAAGTGCCCCGCTTGCCGATTTGACAAGTGTTTGGGATGCGGGATGAAACTCGAAGCGATAAGAGAAGATAGAACCCGCGGAGGCCGTTCCACGTATCAATGCTCGTACACGCTATCAGGTGCTGCCTCTACCGGCTCATTGCTCTCTGCGCATGCGCCGACCACGCTGCGGCACGCATCCAGCCTCACTTGCGTGAATGGCCCTGGGTCGTACAGCAGTCGAGGAGAATCAAGTAACAGCCGACTCACGCCTGACATACCCCCATTATTGCAGGAAATAATGGATGTGGAACATTTATGGCAATACAACGAGTCGGAGCTCAGCCGCATGAGCAAGTCGACCGGCAGCCCGTCCGCCAACCCGCTGCTGGCCGCCAGCGGCATCACCGCGCAGAACTCCAGCGCCGACTTCCTCGCCGACCTGTGCAACATCGCCGACCACCGCCTCTACAAGATCGTCAAGTGGTGCAAGAGTCTGCCGCTCTTCAAGAACATTTCGATCGACGACCAGATCTGTTTGCTGATCAACAGCTGGTGCGAGCTGCTGGTGCTGTCGTGCTGCTACCGGGGCGTCAGCACGCCGGGGGAGGTGCGCGTGGGCGGCGGCCGCGGCATCACCCTACACCAAAGTGCCAAATATGGTCTGACGCCATGTATAGAACGAATGCTCAGCTTCACAGACCATTTGAGGAGGCTACGGGTTGACCGATACGAATATGTTGCGCTCAAGGTCATCGTATTGCTCACCTCAGATGCTCCAGAACTCCGTGAAGCGGAAAAAGTGCGAGCGTCGCAAGAGAAAGCGCTGGCAGCGCTGCAAGCGTACACGGCGGCGCACTCGCCCGATACGCCCGCCAAGTTTGGAGAACTCTTGCTGCGTATTCCCGAACTGCAACGAACTTGccaaTTCTTCATGCAAGTCGGCAAAGAAATGCTCAACCCTGCGAACAAGGGCAAAGACGGGGAAGGTCCCAGTTTCAACCTCTTGATGGAACTGCTGAGAGGAGACCACTGA
Protein Sequence
MMSTSEDAVKVEGGHVSVTTISMSGPETSKGRFSYSSSGVRISVSSEPHDEDSTDAEISKIDFTQHQYEVSMRNKKKRSSSGQCDQAAEQERPMSWEGELSDSEMVIDTSVNNDENSSSLDLQSSRDSIDTLRNVTIKTEPLKTEAFQSLDDQRVLDLKYTVPLQSHQRSLSMNRISVLTDNASLSLARRPSSPSNSAKSVHSDHYETPLPHNPEVQNLTIKKETQLSELKCEPSVGMDKLLGLHGSPLLGRLPRVQSSASTDSAVHSMYTHSVYSSPSASPRPSRHYTPSLSRNNSDASHSSCYSYSSEFSPTHSPVQSRHPHVVYREAAVFPASPAHDDDTDTTDDRLHHHQGISRQQLINSPCPICGDKISGFHYGIFSCESCKGFFKRTVQNRKNYMCLRGGNCPVTVATRKKCPACRFDKCLGCGMKLEAIREDRTRGGRSTYQCSYTLSGAASTGSLLSAHAPTTLRHASSLTCVNGPGSYSSRGESSNSRLTPDIPPLLQEIMDVEHLWQYNESELSRMSKSTGSPSANPLLAASGITAQNSSADFLADLCNIADHRLYKIVKWCKSLPLFKNISIDDQICLLINSWCELLVLSCCYRGVSTPGEVRVGGGRGITLHQSAKYGLTPCIERMLSFTDHLRRLRVDRYEYVALKVIVLLTSDAPELREAEKVRASQEKALAALQAYTAAHSPDTPAKFGELLLRIPELQRTCQFFMQVGKEMLNPANKGKDGEGPSFNLLMELLRGDH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00642460;
90% Identity
iTF_01018623;
80% Identity
iTF_00802011;