Basic Information

Insect: Hipparchia semele
Gene Symbol: -
Assembly: GCA_933228835.1
Location: CAKOGE010000179.1:3432721-3434865[+]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 3.3e-07 8.2e-05 22.6 0.1 4 38 18 51 15 56 0.89

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	3.3e-07	8.2e-05	22.6	0.1	4	38	18	51	15	56	0.89

Sequence Information

Coding Sequence: aTGGCGCGAAACAAGGTATTAGTGAGAAAAAGAGGTGGACATTCGGCTGCAAATATGCTTAAGGCCCTCCAGTTGCATAGATCAGGAGAAAGTATCAGAAAATCAGCGAAAATTTATGATATTGCTTACCCTACCTTACGACGCTATGTAGCAAAAAACTTGCATATCAACGTAGAGGACCTTGCTGAGAAAAGATTGCTACCGAATTATGAAAATCATCTTGTTTTTACAGCTGAACAGGAAGATGTTTATAAAGAGTACATAAAGGAGTGCGCTCTAAAATTTTATGGATTGACCCCAAAAGACTGCCGTAAAGTAGCGTATCAAATGGCAAAAATAAACAACGTAACAATCCCAGATAGTTGGGAGCGAGACAAGATGGCGGGTAAAGAGTGGTTTCGCTCATTCAGGAAACGCCACCTTGATCTTTCAATAAAGAAGCCTGAAGCTTGCAGCTTAGCCCGTGCGTCATCATTTAATCGGGAGACAGTCAAGtcattttttgataatttgAAGACAGCAATTAGTCGTCATTCGTCCTTCAGCACTGGTTGCCGTTTGTACAATTTGGACGAAACAGCCACGACGACAGTCCAGCGTCCTCAAAAAGTTGTGGCGCCTAAGGGAAAGCACAATATTGCCAAGATTACCAGTGGAGAAAAGGGAACTTTGATAACCACTTGCGCGATCATATGTGCTTCAGGTCAAGCATTGCCACCCGCGCTTGTTTTCCCGCGAAAAAATTTCAAGGATATAATGTTAACGGGTGCTCCACCAGGTTCTCTTGGATTGGCACATCCATCTGGATGGATGACATCCGTATTATTCGTTGATGTGATGAAGCACTTCATCAAGCATAGCGCTGCTAGTCCAGAGAACCCCGCGCTTTTAATCCTAGACAACCACGAGTCGCATCTGTCAATAGAAGCCTTGGAATTGGCAAAAAGTTCGGGTGTCACTGTTCTTACATTGCATCCTCACACCACTGCCAAGATGCAACCGCTGGATGTTGGGTTAAATGGCCCTTTTAAGATCTATTATAACAGTGCGATCGACTCCTGGATGGTAAGACATCCAGGAAGGTCTATGACTATTTACGACGTGGCGGAGTGCGTTGGAGTGGCCTACGCTAAGGCAATGACACCCATGAACATATTCGCAGCTTTCAAGAAATGTGGCATATTTCCATTTAACCCCGAAGTATTCACTGACATTGATTTTATGCCATCAGACGTGACTGACAGACCCGAGCCTGAGCCACAAGATCAAAATTTAGACCCAAATACACAGAATGTTGAAACCCAATCTATTAAATCTGATGACACATTTTGTGAAGACGGAAAAGAAAGTCCATCATTGTTAAACATTGATAACATGGCAGAAACTCCAGCTCAAAATGAACCTACGGAAACTATTACAAAGATACAACCCCAAATACTTCAAAGCTCACCAGCAGCAGGATCATCGAagatttctttaatttcaccCAAGCAATTTATGCCACCACTCAAAGCTGGTCCCCGATCtggtaacaaaaaaataagaaaaagagGAAAGAGCAGGATTGCAACTGACACTCCTGAAAAAAATGAGATTATGGAAAACAAGAGGAAGCGTACAGAAATAAAAGCAAAAGCAAACGATGTGAAACGTGCTGTATTTTCAGATAAAAAGGTGAAAAGGAATGTATCAAAAAAAGAGAAAAGGAAGAAGGTGATCAGTGATGAATCTACTTCTGAAGAAGAACTTGAAGTAGTGCCAGAAGTTAGTGAAACTGATATTAGTGAGGGAGATGGATCTGAAGACGATGAAGAAATCATTGTTGTGAaaggaaattttgaaaaattgccCCGCAAACCAGTTGAAGGTGACTATGTTCTTGTAGTTTTTGacgcaaaaaatattaaagtttattatgTAGCTAAGATTATTGAAGTTGACAAATCCAATATTGGAGTATCATTCATGCGGCTACTTAACAAAGAAAATATGAAATTCCGGATGCCTTTGGAACCCGATTTAGCAAATGTCCAATTAAAGGATATTAAAATGATTCTGCCACTGCCAAAAATTAATGGAACACAGAACCGAAATTCAACTTTCAGCTTTCCGATACGTGTTGCTCCCACTATAAACTTACGTTAG
Protein Sequence: MARNKVLVRKRGGHSAANMLKALQLHRSGESIRKSAKIYDIAYPTLRRYVAKNLHINVEDLAEKRLLPNYENHLVFTAEQEDVYKEYIKECALKFYGLTPKDCRKVAYQMAKINNVTIPDSWERDKMAGKEWFRSFRKRHLDLSIKKPEACSLARASSFNRETVKSFFDNLKTAISRHSSFSTGCRLYNLDETATTTVQRPQKVVAPKGKHNIAKITSGEKGTLITTCAIICASGQALPPALVFPRKNFKDIMLTGAPPGSLGLAHPSGWMTSVLFVDVMKHFIKHSAASPENPALLILDNHESHLSIEALELAKSSGVTVLTLHPHTTAKMQPLDVGLNGPFKIYYNSAIDSWMVRHPGRSMTIYDVAECVGVAYAKAMTPMNIFAAFKKCGIFPFNPEVFTDIDFMPSDVTDRPEPEPQDQNLDPNTQNVETQSIKSDDTFCEDGKESPSLLNIDNMAETPAQNEPTETITKIQPQILQSSPAAGSSKISLISPKQFMPPLKAGPRSGNKKIRKRGKSRIATDTPEKNEIMENKRKRTEIKAKANDVKRAVFSDKKVKRNVSKKEKRKKVISDESTSEEELEVVPEVSETDISEGDGSEDDEEIIVVKGNFEKLPRKPVEGDYVLVVFDAKNIKVYYVAKIIEVDKSNIGVSFMRLLNKENMKFRMPLEPDLANVQLKDIKMILPLPKINGTQNRNSTFSFPIRVAPTINLR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00801785;
90% Identity: iTF_01091789;
80% Identity: iTF_00801787;