Hsem008870.1
Basic Information
- Insect
- Hipparchia semele
- Gene Symbol
- arid5b
- Assembly
- GCA_933228835.1
- Location
- CAKOGE010000047.1:3252718-3260487[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 4.5e-11 1e-07 32.6 0.3 3 89 221 294 219 294 0.89
Sequence Information
- Coding Sequence
- atgGATGAGGTGTTAGCCATCAACGATAAGGTGGTGCTGCGCGCGGAGGACCTCCTGAGCTGGCTGTGTGGCGGTGCTGGCTGGCGGTGGGGGTTACGTGCGGTGTGGCGCGGGGCatgcgcgccgcccgccgagcCGCGCCCCACCGCACCCCTCCACCATACCAGGCTCGACTTCAGCGACGTCGACCGCGAGAAGAGCGCTATCAATGTGGACGTGGACGCGCCCGGGGTGGTGGTATTTTCCTACCCGCGCTACTGCCGGTACCGCGCCCTGCTCGCGCGCCTCGAGGGCATTCAGGCGGATTGGCTGCGGGACTCGCTGGTGGCCGCACTGGGCGGGTACGCGGCCCCCACCAAGAACACTAGGATACTGTACTGTAAGGATACGTTCGAATACCCGGAACTAGAAGGGCATGAGTTTGTCTGCAACCACCTAGCCCCCAAACTGAAGGGAAGGCCCCGCGGCCGGCGGAGGCGGGCCCCGCGCTCGCGGTCGCGCTCACGCTTCCCGGACTCGCGGTCCAGTGACAGCGACGCGAGAAACACGCCAGACACTAAGCCGCCGACTCCAAGGCGGCTCTCCCTCCGCAACGGGCCGGAGAAGCAGAgcgaggaagaagaagaagtggaGAAGAAGCCCGAGGAAGTGGCGAAGGACGAGGCGTTCGTGCAGCAACTGAAGAACTTCTTCACTAGAAAGGGGCAGACGCTCAAAGTGGCGCATAGCGTTAAAAACGTGTCCCTGCGGAGCCTGTACGTGGGCGTGGTGTCGGTGGGCGGCTACGAGGCGGCGTGTCGCGGCCAGTTCTGGCGCCGCAGCTACAGCGAGAAGGCGTCCAAAGTGCGCCGGCTGTACGAGAGATACCTCCTCCAATTCGAACACCACGAAAGATGGAACGGGAGGAAGTTCCCGAAACTCCCCAACGGGAAGCTGATAGAGCCAAAAACCATAGACACGATAGACGTCACAGACTCCCCAGTTCGAGACATAGACAACAAGCCCAAGCCAGACCTCCCAGAGAAGAGACTACGAACCCCATCCCCCAAGAAACAAGAGAAACTAATCCTGGACAACGAAACTGGGGAGTTATTGAAAGAAGAGCTGAATATTACATCAAAACCGGCCGAGGAATTAAATAGAGAGTTCCTAGACTCCCTACCTCCTAAAGAAGAGGAaaataaacctgtgaagatttTCGTGAAACCCGTAGAAAAGTTGATAGAGCCAAGTTTAAAGGAGAACGTAGTAAAAATATTCGAAGAGAACACAGCTTTAATGAATGAGCTGACTAAGCAGAAATTGATGGACTCTAGCAATAGTGTAGACGCTAAACATATGAGCGACGGGAGCAGCAGGTTTTTGAGTGAATTGGCGCAGAAATTGCATTTAGGTAACGCAGACACCAGATTCCTGCAGCATCTCTCTCAGAGCCAGTCCACGGACAGTCTGTCGAGCTTGTCCTCGTTGGGGGACAAGTACACTAACGGACACACAAACGGCACTAGCAGCGCTGAACAGAAGGGTCGTCCCGCGGGGCGAAGCTCCCTGCGAGCGGTGCGGGTCAAGCCCACCAGGCCCCAGACAGCGAGACAAACGCGTAAGTGCATCCCGTCTAGCCCCTTGACGAATtga
- Protein Sequence
- MDEVLAINDKVVLRAEDLLSWLCGGAGWRWGLRAVWRGACAPPAEPRPTAPLHHTRLDFSDVDREKSAINVDVDAPGVVVFSYPRYCRYRALLARLEGIQADWLRDSLVAALGGYAAPTKNTRILYCKDTFEYPELEGHEFVCNHLAPKLKGRPRGRRRRAPRSRSRSRFPDSRSSDSDARNTPDTKPPTPRRLSLRNGPEKQSEEEEEVEKKPEEVAKDEAFVQQLKNFFTRKGQTLKVAHSVKNVSLRSLYVGVVSVGGYEAACRGQFWRRSYSEKASKVRRLYERYLLQFEHHERWNGRKFPKLPNGKLIEPKTIDTIDVTDSPVRDIDNKPKPDLPEKRLRTPSPKKQEKLILDNETGELLKEELNITSKPAEELNREFLDSLPPKEEENKPVKIFVKPVEKLIEPSLKENVVKIFEENTALMNELTKQKLMDSSNSVDAKHMSDGSSRFLSELAQKLHLGNADTRFLQHLSQSQSTDSLSSLSSLGDKYTNGHTNGTSSAEQKGRPAGRSSLRAVRVKPTRPQTARQTRKCIPSSPLTN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00352825;
- 90% Identity
- -
- 80% Identity
- -