Carc021012.1
Basic Information
- Insect
- Coenonympha arcania
- Gene Symbol
- arid5b
- Assembly
- GCA_036785405.1
- Location
- CM072076.1:778847-799880[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 4e-12 1.2e-08 36.0 0.2 3 89 237 310 235 310 0.89
Sequence Information
- Coding Sequence
- ATGCACACATGTACTGATAACACCCGTATTTTTGCGCAGTCGGTCAATCAGCCTCGGGACGAAGTGCTCGCGATCAACGACAAGGTGGTGCTGCGTGCCGAGGACCTGCTGAGCTGGGTGTGCTGCGGCGCGGGCTGGCGCTGGGGGCTGCGCGCGGTGTGGCGCGGCGCCTGCGCACCGCccgccgacgccgcgccgcccacgcAGCCGCTGCACCACACGCGGCTGGACTTCAGCGACATCGACAAGGAGAAGAGCGCCATCAGTGTGGACGAGGAGGCTCCAGGAGTGGTGGTGTTCTCGTACCCTCGCTACTGCCGCtaccgcgcgctgctggcgcgacTCGAGGGCATCCAGGCCGACTGGCTTCGGGACTCCCTGGTGGCCGCGCTGGGGGGCTACGCGGCGCCCACCAAGAACACCAGGATATTGTACTGTAAGGACACATTCGAGTACCCCGAGTTGGAAGGTCACGAGTTTGTGTGCAACCACCTGGCGCCGAAGCTGAAGGGGCGGCCGCGGGGGCGGCGGCGGAGGGCGCCCCGGTCCCTCTCCCGCTCGCGCTCCCCGGACTCGCGCTCCAGCGACAGCGACAGGAACACCCCCGAGACTAAGACTCCAAGACGGCTGTCCCTCCGAAACGGCCCGGAGAAACAGAGCGAGGAAGAAGAGGAAGTGGAGAAGAAGCCTGAAGAAGCGGCGAAGGATGAAGCGTTCCTGCAGCAACTGAGGAACTTCGCCACGAGGAAGGGAGAGACCCTCAAAATTACGCATAGCGTTAAACATGTGTCGCTGCGCAGTCTGTACGTGGCGGTGGTGTCGGTCGGAGGCTACGAGGCGGCGTGTCGGAGTCAGTTTTGGCGACGAGGGTACAACGAGAAAGCGTCCAAAGTGCGTCGGTTGTATGAGAGATACCTCCTCCAATTCGAGAACCACGAAAGGTGGAACGGAAGAAAGTTCCCAAGACTACCCAACGGAAGACTTATGCCTGAACCAAAGACCATAGACACGATCGAGGTCACAGACTCGCCCGTCAGGGACATAGACAACAAACCGCACCTCCCGGAGAAGCGACTGCGGACCCCCTCGCCAAAGAAACCAGAAAAACCTGAGACAACCCCTGATAAACACGAGAAACTAGTACTAGACAATGAAACCGGAGAATTACTGAAAGAAGAACTGAATATAACTTCAAAACCTGCGGAAGAATTGAATAGAGAATTCTTAGAATCCCTCCCACCGAAAGATGAAGAGAAATCTGATAGAACGGAGAAAACTGAGAAGTCAGAAAAGCCTGTCAAAATCTTCGTCAAACCAGTGGAGAAGTTAATAGAGCCGAGTCTGAAGGagaatttagttaaaattttcGAAGAAAACACCGCTTTGGCCGAACAAAAATTGGCGGACTCTAGCAAAAGTGTAGACGACAAAAATGATGGGGGAAGGTTTCTGAATGAATTGGCGCAGAAATTGCATTTAGGGGCCCAAGAACGGATCCTTGTGCTGTTCCTTGTGTTACGGGCACCTCGTCACTGA
- Protein Sequence
- MHTCTDNTRIFAQSVNQPRDEVLAINDKVVLRAEDLLSWVCCGAGWRWGLRAVWRGACAPPADAAPPTQPLHHTRLDFSDIDKEKSAISVDEEAPGVVVFSYPRYCRYRALLARLEGIQADWLRDSLVAALGGYAAPTKNTRILYCKDTFEYPELEGHEFVCNHLAPKLKGRPRGRRRRAPRSLSRSRSPDSRSSDSDRNTPETKTPRRLSLRNGPEKQSEEEEEVEKKPEEAAKDEAFLQQLRNFATRKGETLKITHSVKHVSLRSLYVAVVSVGGYEAACRSQFWRRGYNEKASKVRRLYERYLLQFENHERWNGRKFPRLPNGRLMPEPKTIDTIEVTDSPVRDIDNKPHLPEKRLRTPSPKKPEKPETTPDKHEKLVLDNETGELLKEELNITSKPAEELNREFLESLPPKDEEKSDRTEKTEKSEKPVKIFVKPVEKLIEPSLKENLVKIFEENTALAEQKLADSSKSVDDKNDGGRFLNELAQKLHLGAQERILVLFLVLRAPRH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00801587;
- 90% Identity
- -
- 80% Identity
- -