Basic Information

Insect: Himalopsyche kuldschensis
Gene Symbol: -
Assembly: GCA_028554975.1
Location: JAHFWI010000007.1:942803-947943[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 23 0.0083 0.62 11.2 0.6 3 23 53 74 52 74 0.92

2 23 1.2 91 4.4 3.1 2 21 413 432 412 433 0.93

3 23 0.38 29 6.0 0.2 1 21 441 461 441 462 0.96

4 23 0.028 2.1 9.6 2.4 3 21 547 565 546 566 0.96

5 23 0.085 6.3 8.1 0.1 3 23 575 596 573 596 0.93

6 23 0.0029 0.22 12.7 6.4 3 23 618 639 616 639 0.97

7 23 1 75 4.7 1.9 1 23 645 668 645 668 0.92

8 23 0.19 14 7.0 0.0 1 23 693 716 693 716 0.93

9 23 0.0028 0.21 12.7 0.6 1 23 721 743 721 743 0.98

10 23 0.021 1.5 10.0 0.7 1 23 749 772 749 772 0.94

11 23 0.00015 0.011 16.8 1.7 1 23 786 808 786 808 0.97

12 23 0.0039 0.29 12.3 1.1 1 23 854 877 854 877 0.96

13 23 7.5e-05 0.0056 17.7 0.9 1 23 941 964 941 964 0.98

14 23 0.021 1.6 10.0 2.5 2 23 985 1007 984 1007 0.95

15 23 0.035 2.6 9.3 0.5 2 23 1013 1035 1012 1035 0.95

16 23 0.73 54 5.1 1.8 1 10 1087 1096 1087 1107 0.81

17 23 0.00047 0.035 15.2 0.2 1 23 1117 1139 1117 1139 0.94

18 23 0.11 8.5 7.7 0.2 6 23 1245 1263 1241 1263 0.85

19 23 1.1e-08 8.3e-07 29.7 0.6 2 23 1269 1290 1268 1290 0.97

20 23 1.5 1.1e+02 4.1 5.4 1 22 1317 1338 1317 1340 0.90

21 23 0.23 17 6.7 0.2 2 20 1368 1386 1368 1387 0.92

22 23 0.00048 0.036 15.1 0.4 1 23 1388 1411 1388 1411 0.96

23 23 0.0006 0.045 14.8 0.4 1 23 1419 1442 1419 1442 0.92

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	23	0.0083	0.62	11.2	0.6	3	23	53	74	52	74	0.92
2	23	1.2	91	4.4	3.1	2	21	413	432	412	433	0.93
3	23	0.38	29	6.0	0.2	1	21	441	461	441	462	0.96
4	23	0.028	2.1	9.6	2.4	3	21	547	565	546	566	0.96
5	23	0.085	6.3	8.1	0.1	3	23	575	596	573	596	0.93
6	23	0.0029	0.22	12.7	6.4	3	23	618	639	616	639	0.97
7	23	1	75	4.7	1.9	1	23	645	668	645	668	0.92
8	23	0.19	14	7.0	0.0	1	23	693	716	693	716	0.93
9	23	0.0028	0.21	12.7	0.6	1	23	721	743	721	743	0.98
10	23	0.021	1.5	10.0	0.7	1	23	749	772	749	772	0.94
11	23	0.00015	0.011	16.8	1.7	1	23	786	808	786	808	0.97
12	23	0.0039	0.29	12.3	1.1	1	23	854	877	854	877	0.96
13	23	7.5e-05	0.0056	17.7	0.9	1	23	941	964	941	964	0.98
14	23	0.021	1.6	10.0	2.5	2	23	985	1007	984	1007	0.95
15	23	0.035	2.6	9.3	0.5	2	23	1013	1035	1012	1035	0.95
16	23	0.73	54	5.1	1.8	1	10	1087	1096	1087	1107	0.81
17	23	0.00047	0.035	15.2	0.2	1	23	1117	1139	1117	1139	0.94
18	23	0.11	8.5	7.7	0.2	6	23	1245	1263	1241	1263	0.85
19	23	1.1e-08	8.3e-07	29.7	0.6	2	23	1269	1290	1268	1290	0.97
20	23	1.5	1.1e+02	4.1	5.4	1	22	1317	1338	1317	1340	0.90
21	23	0.23	17	6.7	0.2	2	20	1368	1386	1368	1387	0.92
22	23	0.00048	0.036	15.1	0.4	1	23	1388	1411	1388	1411	0.96
23	23	0.0006	0.045	14.8	0.4	1	23	1419	1442	1419	1442	0.92

Sequence Information

Coding Sequence: ATGAGGCTCATTCTGATTTTCAAGGATGATTCAGAGAATGTGGAGCACGAAGGATATCACCTTGCTGAAAGCTTAGCATCTGCGACAGCCAACTCGACTGCACCAAAAGCTGGTTCGAGGCGTCCGGTGGCAGTCGCGCAACTCGCATCCAAAGACTGCTTGGTATGTGGCCGGGCGTACCGCTACTCGCACAACGTTCGTCGGCATGAACTGAACGCTCACAGATACGACAGATATACCAATAAAGTGAAGTCGCCCAACCCTGCTGGCAAGTTTCGACCCAATCCATTCAATTCCAAAACTAGACTGCTGCCAAATCCTGTCCACCGTAAAATGCAACTGTTACCGAAAAGCATCAACAGATTATCTTCCAAGACTGGACCATTCCCGGTGAGAATCCGGTCTTTGGTTGACCTCCAACCAGATATGAATCGAGAACCGGAAATACTCAAATCTCTTCTCACTTCTCGGCCGGAAATGTTGGTCTCGGAACCGGAAATCATGCGCTCTGGGTCCGAAAGTCCAGAGACATTGATATCTGAGCCGGAGTTTCCGTTCCAGGTCGAGGCTATCATATCGGAGCCCGATGCTTTCGTCGAAAACATGCCGACTTCGGATGAAGAGAACGATTACAACGAGACCAATCCGGAAGAAGTGGACCCGGAAGAGGCAGAATTTGAAGAAAATGGTCTAAATGACAGCGAGCGGGTTCCGTCACGCTCGGGTGCCGAGGCTGATTCGGATTGCGATATGGAGATGTCTTCCAATTTGGACATCAATAAAATAATTGGAATAGATGTTCACGAATCTGACAAGGAAGACATGCCTGAGAGAAAAGAGCATATTGTTTCGGACGGTGATCACGTGACCGGAGATGACTTGATCTCTGCTGAAGAAACCCTCGAAGAGAACGGTGACATTGCAAGAAATGAAGCCGACGACGAGTCTGCGGATGATGCTACGCCGCCAAATGACGAAGCAGAACAAGAATCCAACGATGAAGATGATGAAGATGACGCTCCCCCTATAATTTCTCCCCTAGTAGTCATAAATGAAGATTTGTTGCCCGCCGACTGCGATGCTCAAAATATTGAAGGCTGCCAAGAGGAAGACGAAGAAGGGGAAGAGAAAATTATCGAGCCTGAAATTATCAAACCGGTCATTCTGACCATAACTCCTTCTCAGAAAACATTCATTTCCAAGTACCGCGATATAATTGGTCAAATCAATACTATGAAGTGCCACTGTTGCGATCGATCATATCCGAGACGGAAGTCCGTCATTCAGCACTTGCAGAAGAGCGGGCAGAGGGTGCCCAAACACACTTGTTACAATTGCGTCGTTACTTTTGGGCATATCGGTGCCCTACTCAGTCACATGAGGGCTAACTGCTGCACTGGAGCGTGGAAGTTGATATATCAGGACAGCATTCCCGATAGTATGGTTTCTGAAGCAGCCGTCCTCCCTGAACCGTCGCCTCGGCGCGAGGAATTGCTCAATAAGTCGCAATACAAAGACGTCTTGAATGCCAGATCATATGCCTGTCGACTGTGTCCTGCCAAATTTCAGCTAAAACAGTTCATTATGCGTCACGTTCTCGACGTTCACGAAAACGGAGGGCAGCGAATTCCCCTCCTTTGCTCCCATTGCAAGTACCGATTCAAAGAAAACAGACTTTGGAAGAAGCACATTCGCAATGGCGAGTGTACTGTTAATATCGCTTGCGATCTTTGCGATGAAAGATTTAGAGGTTTGCAAGACTTCACCGATCACGCTTTGAGTGTGCACGCTGAAGGTTTCATTGATCAATCCGAGAACGTGTCGCGCTCCGTTGACGGTAGACCCACCGACTGTCACATCTGCCACAAGAACACATCGTCTTACCACAATCTCGTCAAGCACCTGAAGACCATACATGAAGAAGAACGACCTCACATGTGCCAGCATTGTGACAGTAAATTCGAAATGGTGGGTCAGTTGGATAATCATATCTATCAGGAGCATTCGGACAAAATTCCAAACGGTATCGACAAGGTGGACTTAAATCTAGTGAAAGAGGAGGTCACCTCTTACAACTACTCCTGCACTGACTGCTCGTCTATGTTTGATACAGTAGACGGATGGACAGAGCATCAGATAGCAGCACACGGACACATCGCCTTCGAATGTGACCAGTGCGATAAGAAATTTCTGCAAGATTCTGATCTAGCAGACCACAAAAACACACATCTGAGGGTTAAGTTCTACTCTTGCACTCTTTGCTCCAACTCGTATAGCTCTGCGCAAAAACTTTCAGAGCATATGACCGAAAATCACCAAGGGGCCGGGCTATCGGAGCGCTCCGGGGACTCGCCGTTCTTCTGCGAGATATGCCTGAGATCCTTCAAAAGCAGGCAAGCATTTTCTAATCATATGCGGATTCATGCCAAAGTGCCTACCACCAACCGTAAATCTGGGGAGATCAAGCGTCCCGTTCCCGAGAGAATAAGCCAGCCCATCCGCAACGTGATCCCTCACATCAACTATAGAAAAACGTCAAAGACAATATCCGACGCCCCGTACGCTTGCGATATTTGCGGCAAAGGTTTCTTGCACAAAAAGAATATTTGGAAGCATAAAAAAATATTGCATCCGGAGGTGGTCAAAAGATCAGCGGAGCTAGCCATGGTCAATCGTTTCTTGCATGCCGGCTCCACTGAAGAAGACGACGATCCGGCAATCGAAGAGCATGTCGGAGGTCTTTCTATTCCGCAATTTGACAGTTTCACATCCGCTGGAATGGAACTTGACGAGAACGGCGGCTCGGAGTCGGGCGCTCTCTATCAGTGCGACTTGTGCGATAAGAAGTTTGCTGTCAAGAGTAGCATATGGAAGCACAAGCGCGTGAAGCACGGAATCATCAATCCCAATGTGCAAGATGAAGGTATCAAAATATCGGATTCCTCGAGAACTAGTTGCACCATATGTAAAATCAACTTTGCCGATAAGAAAGCATATTACCGTCACAGAAAGCATGTTCACAAAAGTAGCGCGCAGGTCTGCACCATTTGTCGAAAAGTTTTGAATTCCACTGAAGAACTCTGCGAGCATCTGGGCACGGCCCATGCTAAGGAGCTGCTGGTATTTAACGCCGGTCAGACTGATAGCTCTCTGAATGAACCGGAGCCCTCTGCGATCCAATCTAGTGAGGAAGAGGAGGAGGAAGAGGATGAAGGGGGTTCCGACTCCGCTCGACCTGAAGACAGATACCAAGCGAGGTATCCTTGTGAGACTTGCGGAAAATGCTTCTTGGGTATGATGGCTCTTCAGAATCACAGCTGCGCCCCTATAACGGGAGGCTCGGAGACTTACGATTGTGAGATTTGCTCAAAGAGCTATACCTCCATCTCGGCCCTGAAAAGCCACAGGGGTTGGCATCTTAGGTCTCCCGACGGCAAAGCTGCCTTCAGTAATTCGGGACTGTGGATGCCTCAGAATAAAGTTACAAACAAAGTGAGCAGACATGAGGTTATGGAGGCCTTCGGCAACGCCACGCATTCCACTCCCATCCCGGATCCGCAACCGTTGCAGATCAAGCGGAAGCTCCCCCCGGATGTGCAGCTCACCCTGCTGAAGAGGCGGAAGTTACCTGACGAGCTGACTGTCGAGCTAGTGACGACTGCGCCACGCCCACAACCGGCGCCTATACAGCAATCCGGTTTGTCCCGCTTGGAAGACCGTTTTTGCCGTCCATGTGGGAAAGAGTTCACCAAGAAGGCTGCATACCTCCGCCATGTGGATGAAGTGCACCGACTCACCTCAGTCTCGTGTCCCATTTGCGGGAAGAGTTTCACTAGGAAATCGACTCTTCTCGTTCATATGAGAAAGCACGAATCTTCCACAGAAACCGGCGGGGCTCCCGAGGACAGTGAAGAGGAAGAGGCCCCCACTGAAGACGACCCCCGTCTTTTCGCCTGTGATTTGTGTGATGTTAGATACCACTCCGCAAAGTCACTCAGACGCCACTGCGCCAAACATCACAACATAGCCGAGGAAGACGTCGTGGTTGAGAGGCCGGCGCCGCCTGTCGGCCGGGTCGCCGAAGCTCCTGCCGCTGAGCGGAAGTGCGGCCAATGCGGTGAAGAGTTCAAAACGGAGGCGGACGCCTGGCAACACCGTCATTACCCGTGCAAGCAGTGCGGTCTTTATTTCTCTAAACCCCAGTACCTCGTAGCGCACACCCGAGCCCGCCATTCAGACAGCGACAAAATGTTTTTCCCATGCAGTATGTGTGATCGCTTTTACATGAACAAGAAGAGTTTGCAGCGACACGTGGAAGCGGCGCATTAA
Protein Sequence: MRLILIFKDDSENVEHEGYHLAESLASATANSTAPKAGSRRPVAVAQLASKDCLVCGRAYRYSHNVRRHELNAHRYDRYTNKVKSPNPAGKFRPNPFNSKTRLLPNPVHRKMQLLPKSINRLSSKTGPFPVRIRSLVDLQPDMNREPEILKSLLTSRPEMLVSEPEIMRSGSESPETLISEPEFPFQVEAIISEPDAFVENMPTSDEENDYNETNPEEVDPEEAEFEENGLNDSERVPSRSGAEADSDCDMEMSSNLDINKIIGIDVHESDKEDMPERKEHIVSDGDHVTGDDLISAEETLEENGDIARNEADDESADDATPPNDEAEQESNDEDDEDDAPPIISPLVVINEDLLPADCDAQNIEGCQEEDEEGEEKIIEPEIIKPVILTITPSQKTFISKYRDIIGQINTMKCHCCDRSYPRRKSVIQHLQKSGQRVPKHTCYNCVVTFGHIGALLSHMRANCCTGAWKLIYQDSIPDSMVSEAAVLPEPSPRREELLNKSQYKDVLNARSYACRLCPAKFQLKQFIMRHVLDVHENGGQRIPLLCSHCKYRFKENRLWKKHIRNGECTVNIACDLCDERFRGLQDFTDHALSVHAEGFIDQSENVSRSVDGRPTDCHICHKNTSSYHNLVKHLKTIHEEERPHMCQHCDSKFEMVGQLDNHIYQEHSDKIPNGIDKVDLNLVKEEVTSYNYSCTDCSSMFDTVDGWTEHQIAAHGHIAFECDQCDKKFLQDSDLADHKNTHLRVKFYSCTLCSNSYSSAQKLSEHMTENHQGAGLSERSGDSPFFCEICLRSFKSRQAFSNHMRIHAKVPTTNRKSGEIKRPVPERISQPIRNVIPHINYRKTSKTISDAPYACDICGKGFLHKKNIWKHKKILHPEVVKRSAELAMVNRFLHAGSTEEDDDPAIEEHVGGLSIPQFDSFTSAGMELDENGGSESGALYQCDLCDKKFAVKSSIWKHKRVKHGIINPNVQDEGIKISDSSRTSCTICKINFADKKAYYRHRKHVHKSSAQVCTICRKVLNSTEELCEHLGTAHAKELLVFNAGQTDSSLNEPEPSAIQSSEEEEEEEDEGGSDSARPEDRYQARYPCETCGKCFLGMMALQNHSCAPITGGSETYDCEICSKSYTSISALKSHRGWHLRSPDGKAAFSNSGLWMPQNKVTNKVSRHEVMEAFGNATHSTPIPDPQPLQIKRKLPPDVQLTLLKRRKLPDELTVELVTTAPRPQPAPIQQSGLSRLEDRFCRPCGKEFTKKAAYLRHVDEVHRLTSVSCPICGKSFTRKSTLLVHMRKHESSTETGGAPEDSEEEEAPTEDDPRLFACDLCDVRYHSAKSLRRHCAKHHNIAEEDVVVERPAPPVGRVAEAPAAERKCGQCGEEFKTEADAWQHRHYPCKQCGLYFSKPQYLVAHTRARHSDSDKMFFPCSMCDRFYMNKKSLQRHVEAAH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00799473;
90% Identity: iTF_00799473;
80% Identity: -