Basic Information

Insect: Himalopsyche anomala
Gene Symbol: -
Assembly: GCA_031772345.1
Location: CM062826.1:5794021-5798922[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 23 0.58 27 5.7 1.3 3 23 46 67 45 67 0.92

2 23 1.7 81 4.2 3.2 2 21 406 425 405 426 0.93

3 23 0.46 22 6.0 0.2 1 21 434 454 434 455 0.96

4 23 0.033 1.6 9.6 2.4 3 21 540 558 539 559 0.96

5 23 0.1 4.8 8.1 0.1 3 23 568 589 566 589 0.93

6 23 0.0035 0.16 12.7 6.4 3 23 611 632 609 632 0.97

7 23 1.2 58 4.7 1.9 1 23 638 661 638 661 0.92

8 23 0.23 11 7.0 0.0 1 23 686 709 686 709 0.93

9 23 0.0025 0.12 13.2 0.5 1 23 714 736 714 736 0.98

10 23 0.025 1.2 10.0 0.7 1 23 742 765 742 765 0.94

11 23 0.00018 0.0084 16.8 1.7 1 23 779 801 779 801 0.97

12 23 0.0047 0.23 12.3 1.1 1 23 847 870 847 870 0.96

13 23 9e-05 0.0043 17.7 0.9 1 23 933 956 933 956 0.98

14 23 0.025 1.2 10.0 2.5 2 23 977 999 976 999 0.95

15 23 0.043 2 9.3 0.5 2 23 1005 1027 1004 1027 0.95

16 23 0.66 32 5.5 1.8 1 19 1076 1094 1076 1097 0.75

17 23 0.00056 0.027 15.2 0.2 1 23 1106 1128 1106 1128 0.94

18 23 0.14 6.5 7.7 0.2 6 23 1234 1252 1230 1252 0.85

19 23 1.3e-07 6.2e-06 26.6 1.0 2 23 1258 1279 1257 1279 0.97

20 23 1.8 86 4.1 5.4 1 22 1306 1327 1306 1329 0.90

21 23 0.15 7 7.6 0.3 2 20 1358 1376 1358 1377 0.92

22 23 0.00058 0.027 15.2 0.4 1 23 1378 1401 1378 1401 0.96

23 23 0.00072 0.034 14.9 0.4 1 23 1409 1432 1409 1432 0.92

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	23	0.58	27	5.7	1.3	3	23	46	67	45	67	0.92
2	23	1.7	81	4.2	3.2	2	21	406	425	405	426	0.93
3	23	0.46	22	6.0	0.2	1	21	434	454	434	455	0.96
4	23	0.033	1.6	9.6	2.4	3	21	540	558	539	559	0.96
5	23	0.1	4.8	8.1	0.1	3	23	568	589	566	589	0.93
6	23	0.0035	0.16	12.7	6.4	3	23	611	632	609	632	0.97
7	23	1.2	58	4.7	1.9	1	23	638	661	638	661	0.92
8	23	0.23	11	7.0	0.0	1	23	686	709	686	709	0.93
9	23	0.0025	0.12	13.2	0.5	1	23	714	736	714	736	0.98
10	23	0.025	1.2	10.0	0.7	1	23	742	765	742	765	0.94
11	23	0.00018	0.0084	16.8	1.7	1	23	779	801	779	801	0.97
12	23	0.0047	0.23	12.3	1.1	1	23	847	870	847	870	0.96
13	23	9e-05	0.0043	17.7	0.9	1	23	933	956	933	956	0.98
14	23	0.025	1.2	10.0	2.5	2	23	977	999	976	999	0.95
15	23	0.043	2	9.3	0.5	2	23	1005	1027	1004	1027	0.95
16	23	0.66	32	5.5	1.8	1	19	1076	1094	1076	1097	0.75
17	23	0.00056	0.027	15.2	0.2	1	23	1106	1128	1106	1128	0.94
18	23	0.14	6.5	7.7	0.2	6	23	1234	1252	1230	1252	0.85
19	23	1.3e-07	6.2e-06	26.6	1.0	2	23	1258	1279	1257	1279	0.97
20	23	1.8	86	4.1	5.4	1	22	1306	1327	1306	1329	0.90
21	23	0.15	7	7.6	0.3	2	20	1358	1376	1358	1377	0.92
22	23	0.00058	0.027	15.2	0.4	1	23	1378	1401	1378	1401	0.96
23	23	0.00072	0.034	14.9	0.4	1	23	1409	1432	1409	1432	0.92

Sequence Information

Coding Sequence: ATGGACGATTCAGAGAATGTGGAGCAAGATGGATATCACCAAGCGGAGAGCTTAGTATCTGCAGCGGTCAACTCGAGTGCACCCAAAGCTGGATCGAGGCGTCCGGTGGCAGTTGCTCAACTTGCATCCAAGAACTGCTTGGTATGCAGTCGCGAGTACCGTTACTCGCACAACGCTCGTCGACACGAACTAAACGCTCACAGATACGACCGATATACCAATAAAGTCAAGTCGCCCAACCCTGCTGGCAAGTTTCGACCTAATCCGTTCAATTCTAAAACTAGACTGCTGCCGAATTCCGTCCACCGTAAAATGCAGCTGCTGCCGAAAAACACTGGCAGATTATCTTCCAAGACTGGACCTTTCCCGGTGAGAATCCGGTCTCTTGTTGACCTACAGCCGGATATGAATCGAGAACCTGAAATACTTAAATCTCTTCTTACTTCTCGTCCAGAAATGTTGGTCTCCGAACCGGAAATCATGCGCTCAGGGTCTGAAAGTCCGGAGACATTGATATCCGAACCGGAGTTTCCATTCCAAGTCGAGGCTATCATATCAGAACCTGATGCATTTGTCGAAAACATGGCCACTTCGGATGAAGAGAATGATTATAATGAGACCAATACGGAAGAGGTGGACCCGGAAGAGGGAGAATTCGAAGAAAACGGTTTAAATGATGGTGAGCGGATTCCGTCACGCTCGGGTGCCGAGGTTGATTCTGATTGCGATATGGAGATATCTTCCAATTTGgacatcaataaaataattggaatAGACGTTCACGAATCTGACAAAGAAGATTTGCCAGAGAGAAAAGAGCATATTGTTTCGGATGGAGATCACGTCACCGGAGATGATTTGATCTCTACTGAAGAAACCCTCGAAGAGAACGGTGAAGTCGGAAGAAATGAAGCCGATGAAGAATCTACGGAAGATGTTATTCCGCAAAATGAAGATGGAGAACAAGAATCCAACGATGAAGATGATGACGACGACGTTCCGCCTATAATTTCTCCCCTCGTAGTCATTAATGAAGATTTGCTGCCCGCCGACTGTGATGCTCAAAATATAGAAGGCTGTCTGGAGGAAGACGAAGAAGGGGAAGAGAAAAGTCTTGagcctgaaataataaaaccggTCATTCTGACCATAACTccttctcaaaaagttttcatttcaaaGTACCGCGACATAATCGGCCAAATAAATACCATGAAGTGCCATTGTTGTGATAGAACGTATCCGAGACGAAAGTCAGTCATTCAACACTTGCAGAAGAGTGGGCAGAGAGTACCAAAACACACATGTTATAATTGTGTTGTTACTTTTGGGCATATTGGTGCTCTCCTCAGTCACATGAGGGCCAATTGCTGCACTGGAGCATGGAAGTTAATATATCAGGACAGCATTCCTGACAGTATGGTGTCTGAAGCTGCCATTCTTCCCGAACCGTCGCCTCGACGTGAGGAATTGCTCAATAAGTCACAATACAAAGATGTCTTGAATGCCAGATCATACGCATGTCGACTGTGTCCTGCCAAATTTCAGTTAAAACAGTTCATTATGCGCCACGTTCTTGACGTCCATGAAAACGGAGGGCAGCGCATTCCTCTCCTTTGTTCGCATTGCAAGTATCGATTCAAAGAAAACAGACTTTGGAAGAAGCATATCCGCAACGGTGAATGCACTGTTAACATCGCTTGCGATCTCTGTGATGAAAGATTCCGAGGTTTGCAAGACTTCACCGATCATGCTCTCAGCGTGCACGCTGAAGGTTTCATCGATCAATCAGAGAATGTGTCTCGCTCCGTCGACGGCAGGCCCACTGACTGTCACATCTGCCACAAGAACACTTCATCTTACCACAATCTCGTCAAGCACCTGAAGACAATTCATGATGAAGAGCGACCTCATATGTGCCAGCATTGTGACAGTAAATTTGAAATGGTGGGTCAGTTAGATAATCACATCTATCAGGAGCATTCGGACAAAATTCCAAACGGCCTCGACAAGGTAGATTTAAATCTGGTGAAGGAGGAGGTCACATCTTACAACTACTCGTGCACTGATTGTTCGTCCATGTTTGATACGGTAGACGGATGGACGGAGCATCAGATAGCTGCACACGGTCACATCGCCTATGAATGTGACCAATGTGATAAGAAATTTTTGCAAGATTCCGATTTGGCAGACCATAAAAACACTCATCTGAgggttaaattttattcttgcACCCTTTGCTCCAACTCGTATAGCTCCGCGCAAAAACTTTCAGAGCACATGACCGAAAATCATCAAGGGGCCGGACTATCGGAGCGTTCTGGGGATTCGCCATTCTTCTGCGAGATATGTCTGAGATCCTTCAAAAGCAGACAAGCGTTCTCAAATCACATGCGAATTCACGCCAAAGTGCCTACCACTAACCGTAAATCTGGGGAAATCAAACGTCCCATTCCTGAGAGAATAAGCCAGCCCATCCGTAATGTGACTTCTCATATCAATTATAGAAAAACATCGAAGACGATATCTGACGCTCCGTACGCTTGTGATATTTGTGGCAAAGGTTTCTTACACAAAAAGAATATttggaaacataaaaaaatattgcatccGGAAGTGGTCAAAAGATCAGCAGAATTGGCTATGGTCAATCGTTTCTTGCATGCCGGCTCCACGGAAGAAGACGATGATCCGGCGATCGAAGAGCACGGCGGGGGTCTTTCCATTCCGCAATTTGACAGTTTTACTTCTGCTGGAATGGATCTCGAAGAGAATGGTTCAGAGACGGGGGCTCTTTATCAGTGCGATTTGTGCGATAAGAAGTTTGCTGTCAAAAGCAGTATATGGAAGCACAAGCGGGTGAAGCACGGAATCATCAATCCCAATGTGCAAGACGAAGCGATCAAGATATCCGATTCCTCAAGAACTAGTTGTACCATATGTAAAATCAACTTTGCTGATAAGAAAGCATATTATCGTCATAGAAAGCACGTTCACAAAAGTAGTGCCCAAGTATGCACCATCTGTCGAAAAGTTTTAAATTCCACTGAAGAACTCTGCGAGCATCTTGGCACAGCCCACGCTAAAGAGCTGCTGGTATTCAATGCCGGTCAGACTGATAGCTCTTTAAATGAACAGGAGCCCTCTGCCATCCACTCTAGCGAGGAAGAGGAGGAGGACGGCGGTTCTGACTCTGCTCGACCTGAAGACAGATACCAGGCGAGGTATCCTTGTGAGACTTGCGGAAAATGCTTCTTGGGTATGATGGCACTTCAGAATCACAGTTGCACTCCTGCAACTGGAGGCTCAGAGACTTACGATTGTGAGATATGCTCAAAGAGCTATACCTCCATCTCGGCACTCAAAAGTCACAGGGGTTGGCATCTCAGGTCTCCCGACGGCAAGGCGGCCTTCAGTAATTCAGGACTTTGGATGCCTCAGAACAAAGTCACAAACAAAGTAAGCAGGCACGAGGTTATGGAGGCTTTTGGCAACGTCACACATTCCACCCCTGTCCCGGATCCGCAACCATTACAGATCAAGCGGAAGCTCCCTCCAGATGTGCAGCTCACCCTGCTGAAGAGGAGGAAGTTACCGGATGAGCTAACAGTTGAATTGGTGACGACTGCGCCACGCCCGCAAGTTGCCTCCATGCAGCAATCTGGTTTGTCCCGCTTGGAGGACCGTTTTTGTCGTCCGTGTGGGAAAGAGTTCACAAAGAAAGCTGCCTACCTCCGACATGTGGATGAAGTGCACCGTCTCACATCTGTCTCTTGTCCTATTTGCAGCAAGAGTTTCACTAGGAAATCGACTCTCCTTGTTCACATGAGAAAGCATGAATCTTCCACAGAAACTGGCGGGGCCGCCGAAGACAGTGAAGAGGAAGAGGCAGCTGCCGAAGACGACCCCCGTCTTTTTGCCTGCGATCTGTGCGATGTAAGATACCACTCTGCAAAGTCACTCAGACGCCATTGCGCCAAACATCACAACATAGCCGAGGAAGACGTCGTGGTCGAAAGGCCGGCGCCTCCGCCTGTTGTTCGGGTCGCCGAAGCTCCGCCTGCTGAACGCAAGTGCAGCCAGTGCGGTGAAGAATTCAAAACGGAGGCGGATGCATGGCAACACCGTCACTACCCGTGCAAGCAGTGCGGTCTTTATTTCTCCAAACCTCAATATCTCGTAGCACACACCCGAGCCCGCCATTCAGACAGTGACAAGATGTTTTTCCCTTGCAGTATGTGCGATCGATTCTACATGAACAAGAAGAGTTTGCAGCGGCATGTGGAAGCGGCGCATTAA
Protein Sequence: MDDSENVEQDGYHQAESLVSAAVNSSAPKAGSRRPVAVAQLASKNCLVCSREYRYSHNARRHELNAHRYDRYTNKVKSPNPAGKFRPNPFNSKTRLLPNSVHRKMQLLPKNTGRLSSKTGPFPVRIRSLVDLQPDMNREPEILKSLLTSRPEMLVSEPEIMRSGSESPETLISEPEFPFQVEAIISEPDAFVENMATSDEENDYNETNTEEVDPEEGEFEENGLNDGERIPSRSGAEVDSDCDMEISSNLDINKIIGIDVHESDKEDLPERKEHIVSDGDHVTGDDLISTEETLEENGEVGRNEADEESTEDVIPQNEDGEQESNDEDDDDDVPPIISPLVVINEDLLPADCDAQNIEGCLEEDEEGEEKSLEPEIIKPVILTITPSQKVFISKYRDIIGQINTMKCHCCDRTYPRRKSVIQHLQKSGQRVPKHTCYNCVVTFGHIGALLSHMRANCCTGAWKLIYQDSIPDSMVSEAAILPEPSPRREELLNKSQYKDVLNARSYACRLCPAKFQLKQFIMRHVLDVHENGGQRIPLLCSHCKYRFKENRLWKKHIRNGECTVNIACDLCDERFRGLQDFTDHALSVHAEGFIDQSENVSRSVDGRPTDCHICHKNTSSYHNLVKHLKTIHDEERPHMCQHCDSKFEMVGQLDNHIYQEHSDKIPNGLDKVDLNLVKEEVTSYNYSCTDCSSMFDTVDGWTEHQIAAHGHIAYECDQCDKKFLQDSDLADHKNTHLRVKFYSCTLCSNSYSSAQKLSEHMTENHQGAGLSERSGDSPFFCEICLRSFKSRQAFSNHMRIHAKVPTTNRKSGEIKRPIPERISQPIRNVTSHINYRKTSKTISDAPYACDICGKGFLHKKNIWKHKKILHPEVVKRSAELAMVNRFLHAGSTEEDDDPAIEEHGGGLSIPQFDSFTSAGMDLEENGSETGALYQCDLCDKKFAVKSSIWKHKRVKHGIINPNVQDEAIKISDSSRTSCTICKINFADKKAYYRHRKHVHKSSAQVCTICRKVLNSTEELCEHLGTAHAKELLVFNAGQTDSSLNEQEPSAIHSSEEEEEDGGSDSARPEDRYQARYPCETCGKCFLGMMALQNHSCTPATGGSETYDCEICSKSYTSISALKSHRGWHLRSPDGKAAFSNSGLWMPQNKVTNKVSRHEVMEAFGNVTHSTPVPDPQPLQIKRKLPPDVQLTLLKRRKLPDELTVELVTTAPRPQVASMQQSGLSRLEDRFCRPCGKEFTKKAAYLRHVDEVHRLTSVSCPICSKSFTRKSTLLVHMRKHESSTETGGAAEDSEEEEAAAEDDPRLFACDLCDVRYHSAKSLRRHCAKHHNIAEEDVVVERPAPPPVVRVAEAPPAERKCSQCGEEFKTEADAWQHRHYPCKQCGLYFSKPQYLVAHTRARHSDSDKMFFPCSMCDRFYMNKKSLQRHVEAAH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00800365; iTF_00801140;
90% Identity: iTF_00800365; iTF_00801140;
80% Identity: -