Basic Information

Insect: Himalopsyche kuldschensis
Gene Symbol: -
Assembly: GCA_028554975.1
Location: JAHFWI010000020.1:4333723-4345753[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 1.7e-05 0.0013 19.7 2.1 1 23 176 199 176 199 0.97

2 12 4.3e-06 0.00032 21.6 0.2 1 23 331 353 331 353 0.98

3 12 2.6e-06 0.00019 22.3 4.4 1 23 360 382 360 382 0.96

4 12 3.9e-06 0.00029 21.7 4.3 1 20 388 407 388 410 0.93

5 12 5.8e-06 0.00044 21.2 1.4 1 21 416 436 416 439 0.90

6 12 0.00094 0.07 14.2 0.7 3 23 451 471 450 471 0.97

7 12 5.7e-05 0.0043 18.1 3.3 1 23 476 498 476 498 0.96

8 12 1.1e-06 8.5e-05 23.4 0.5 1 23 504 526 504 526 0.96

9 12 6.5e-05 0.0049 17.9 0.7 1 23 532 554 532 554 0.98

10 12 9.1e-07 6.8e-05 23.7 1.6 3 23 562 582 560 582 0.96

11 12 5e-06 0.00037 21.4 0.6 1 23 588 610 588 610 0.99

12 12 0.0064 0.48 11.6 0.8 1 23 615 638 615 638 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	1.7e-05	0.0013	19.7	2.1	1	23	176	199	176	199	0.97
2	12	4.3e-06	0.00032	21.6	0.2	1	23	331	353	331	353	0.98
3	12	2.6e-06	0.00019	22.3	4.4	1	23	360	382	360	382	0.96
4	12	3.9e-06	0.00029	21.7	4.3	1	20	388	407	388	410	0.93
5	12	5.8e-06	0.00044	21.2	1.4	1	21	416	436	416	439	0.90
6	12	0.00094	0.07	14.2	0.7	3	23	451	471	450	471	0.97
7	12	5.7e-05	0.0043	18.1	3.3	1	23	476	498	476	498	0.96
8	12	1.1e-06	8.5e-05	23.4	0.5	1	23	504	526	504	526	0.96
9	12	6.5e-05	0.0049	17.9	0.7	1	23	532	554	532	554	0.98
10	12	9.1e-07	6.8e-05	23.7	1.6	3	23	562	582	560	582	0.96
11	12	5e-06	0.00037	21.4	0.6	1	23	588	610	588	610	0.99
12	12	0.0064	0.48	11.6	0.8	1	23	615	638	615	638	0.97

Sequence Information

Coding Sequence: ATGTCACATGAAGTTATTCGCTTGGACCGCGTGTGCCGTGGTTGTCTTAGGGAAGATGGCGAGATGAAATCCTTATTTACAATCGGCGAAGGTCTCGGACAGGACAAACAGCGACTCGACCAAATGCTCATCTCGAGCACTCAGATTCAGGTCACAGAAAATGATGGATTGCCATGTCAGATTTGCGAATTGTGCACACACCAGCTATATTCTGCCTACTCTTTTAAACATATGTGTGAACGCTCGGATGCTAATCTCAAAAGATATGTTTCGAAGATTCATCAGGCACCACTTGCTCCTAGTGTTTGTCATCAAGCTACGAGTGGGACAGGAGTTAAGCAGGAAACATCTGTACCAACTATATCTGGAAATAGTGAAATTATTGACTTCAATACAATGATCAATGCTGACTTACCAATTATCAAGGTAGAAGCTAGAGAAAATTTGGGGTATGAACACGATGATAAAGCAGTTGTCAGATATAATAATTATGAGAAACATCAGTTACAATGTGAAGGAAAGTCTTACGCGTGTACAATTTGTGACAAAACATTTAGGAAACATGATTCACTTATCATCCATAGCAAAACATCACATGGGAAAAAAGAAGATCCTGATGATTATACAAATAATGCAGAAGCGATTACCGTTGAAGTGCCACCGAAGACCCATATTTCAAAGAAAAGCAGCTCATTGCACAAAAGCTATGAACCACTATTGGGACCAAGTTTAGATCTGTTAAATCCGGAAGTTAATATAAAACAAGAACCCTTAGAAGAATTATTAGAAGAGGCAGAAAGAGAAATACAAGGCTTGAATGATGATGATGATAGCTTTGCTGATGCCTTTGCTGATCATAACAGTCCGCCCAGTATAGATGACAATGACTATCAGTCGGACAATTCTGGCTCGAAGCCTCTGCTTAGTTTGAAACGAAAAGTGGGTAGACCGCGGAAAAAACCACTTCTCGATGATTCTATGGGAGAAAAATATCCGTGCAATATGTGTCCTAAAGTATTTTCTTCAAATATTGGCCTAAAAATACATCAGTCGAAACACACCGGAGAAACAATATTACATACTTGTTCAgtttgtggaaaatcattcaacagatcaaatcatctcaagcgtcatgaattgatacacggctcaatcaaaagacacaagtgtgatacgtgtggaaaatcatttaATAGACAAGACCATCTAAAGAAACATTTATGGATGCACTTGGAGACTAAACCCCACCAGTGTGAAATATGTAACAAAGGATTCTCTAGAGCTGAACATCTGAATCGGCATAAAGTTGCCGTGCATTCAGGAAAAGAGAAGAATCCCAAGACAGCTTTTTGTTTGATATGCAATAGAGGCTTTACAACTGTCAAATacttggacacgcacatgcagatgcacactgataaaacattctcatgcaaactctgtgataaaacatttgattctaaatggcatttgaaagaacacagcaaatggcattcgaatgagaagccatttttgtgtTCAGAGTGTGGCCAGAGgttcattcgaaatgattatcttattatacacatgcgtagacacaaaggagaaaaaccattcaagtgcagattctgtgggaaaggtttcccgagggtaaccgaccttaacgtccatgaaagatatcacaccggagaaaaaactcatctttgcacaatttgcggaaaaggtttccaacggcagtataatttgaaggtacatctaagagttcacacaggggagaagccatatgtctgttcattctgtggtaagacattcgcacaaggaaatgatctgaaatcgcatgttcgccgccacacaggagaaagATTCAATTGCGAAGTTTGTGGAGAAGGTTTCCTGCAAGGATATCATTTGACTCAACACAAACGGAGTGTGCACGGTCTTGAATGTTCATCGCATATACGAAGAGTGGAAAAACATCTCCAGCCAAATCCTGACATCAAACCACACGTAGTTACCAAACGAAGAAGCCGCGGAGCAAATCAAAACCTTCTCGTCGCTCAGATGAATCAGATAAAGTTAGCGAATGAGCTCCAGCAAGCTGTTGAACCCTCAGCTATTGTCACTAATGAAAATGCCTGA
Protein Sequence: MSHEVIRLDRVCRGCLREDGEMKSLFTIGEGLGQDKQRLDQMLISSTQIQVTENDGLPCQICELCTHQLYSAYSFKHMCERSDANLKRYVSKIHQAPLAPSVCHQATSGTGVKQETSVPTISGNSEIIDFNTMINADLPIIKVEARENLGYEHDDKAVVRYNNYEKHQLQCEGKSYACTICDKTFRKHDSLIIHSKTSHGKKEDPDDYTNNAEAITVEVPPKTHISKKSSSLHKSYEPLLGPSLDLLNPEVNIKQEPLEELLEEAEREIQGLNDDDDSFADAFADHNSPPSIDDNDYQSDNSGSKPLLSLKRKVGRPRKKPLLDDSMGEKYPCNMCPKVFSSNIGLKIHQSKHTGETILHTCSVCGKSFNRSNHLKRHELIHGSIKRHKCDTCGKSFNRQDHLKKHLWMHLETKPHQCEICNKGFSRAEHLNRHKVAVHSGKEKNPKTAFCLICNRGFTTVKYLDTHMQMHTDKTFSCKLCDKTFDSKWHLKEHSKWHSNEKPFLCSECGQRFIRNDYLIIHMRRHKGEKPFKCRFCGKGFPRVTDLNVHERYHTGEKTHLCTICGKGFQRQYNLKVHLRVHTGEKPYVCSFCGKTFAQGNDLKSHVRRHTGERFNCEVCGEGFLQGYHLTQHKRSVHGLECSSHIRRVEKHLQPNPDIKPHVVTKRRSRGANQNLLVAQMNQIKLANELQQAVEPSAIVTNENA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00799445;
90% Identity: iTF_00799445;
80% Identity: -