Hjap010871.1
Basic Information
- Insect
- Himalopsyche japonica
- Gene Symbol
- zfy1
- Assembly
- GCA_028555115.1
- Location
- JAHFWJ010000752.1:740840-750448[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 14 8.8 6.2e+02 1.6 0.1 3 16 161 174 159 176 0.88 2 14 9 6.4e+02 1.6 0.0 1 23 361 384 361 384 0.85 3 14 0.0045 0.32 12.0 0.1 1 23 391 414 391 414 0.96 4 14 0.38 27 5.9 3.3 1 23 466 488 466 488 0.89 5 14 0.0051 0.36 11.8 0.3 2 19 495 512 495 513 0.94 6 14 0.056 4 8.5 0.6 3 23 543 564 542 564 0.93 7 14 1.8 1.3e+02 3.8 0.2 1 23 571 594 571 594 0.94 8 14 0.011 0.75 10.8 2.5 1 23 613 636 613 636 0.94 9 14 8.2e-06 0.00059 20.6 0.7 1 23 703 725 703 725 0.97 10 14 8.3e-07 5.9e-05 23.7 1.6 1 23 731 753 731 753 0.97 11 14 0.0024 0.17 12.8 2.4 1 23 759 781 759 781 0.98 12 14 0.36 26 6.0 5.4 1 23 787 809 787 809 0.91 13 14 0.00028 0.02 15.8 2.5 1 23 815 837 815 837 0.98 14 14 4.3e-05 0.0031 18.3 2.3 1 23 843 866 843 866 0.97
Sequence Information
- Coding Sequence
- ATGCAGGTTGACAATTCGAATAAAAGATGTGCTGTGCTGAAATGTGTCAATGCAGAGAATCCCAGTACCGATACTATATTTTTTCCATTTCCTAAAGATTCTGAAAGATGCCTCCAATGGCTACTGATGTGCAATAGGAGGGACATAATACCAAATTCAGTGGAGAAAATAAATAAAGAATATAACATTTGTTCCTTACATTTTGCAAAGAATAATTTTGTTAAGAACCATAAAAAACTTTTGACAGCCTCTGCGGTACCCACAAATTTCATTAAAGAGGGAAACACATCGTCAATCATTGAAATTGATCAGAATTTGAATAATGATTGTGATGGAAGTATTTCTGTACTGCTTCAAGATGATAATAATTTTGTCACTGCTTCCTCAAATGAAACTTATTATATACAAGAGATAAGTGATATGACCCCATCAAAATCAGTTAGTATCCTAGTAGAGGAGGCTAGAGCCAAGTCTGTTATCTGCAGACTGTGTTCGGAAAGCTATTCTGACACAGATAACATGTTTGAAATTTTTGGTGAATCAAATATCTGTGAAAAAATAAATTTATGCTTACCAATATGCGTCTTACCGTCTGATGCACTGCCTAAAACTATTTGCAAAGAATGTTTCGAATGTTTAGAAAAACATTTGAAATTTCATCAAGCCGTTCTTGAGTCGGAAGATGTTCTCAAGCAAATGTTTGATGGTTTTTTAGGATCAAATATGCCAATGATACAAAATATTCCACAGGAAGAATATGATAATGACAGCAATCATAAAAATTTTGCTAACAGTGTACATAACGATCATTTATATGCGGAAATTTCATCCGAAGCAAATGAAAATATAGAAGAAGTTAATGTTCCTGATAATGATTGTGATATTTTATCTACTGATATTCCTAATATGACAACAGTTTATGATCAAAATGTTACAGTTGAAACATTGGAAACCATTCACGACTCGTTGATTAATTGTGAGGACAATATATCTGATGTTGAAGTCATTAACATTGTCAACAATGATAATAATCAATATGAAGAAAATAGCAGGATTATTTTTGACAGCTCTACACCCATGTACATGTGTAACTTGTGCAATGGCATTGCTCCTGATTTGGTGTCACTTTTTAGTCATTCAATTGTTACGCATTTGACCTCTGATGATAAATATCCTTGTGTCTTATGTGACTCATTGACTTTTACAACCGAAGATGAATTAATCCAGCACATGAATCTTCATCAATATCAACACACCTCCAATACGGATGACACTGAAACAAACCTTATTGACAAACGAACCTTAGAATTAGATTCTTGCGACATTTTTGAAATGTCTTTCAATAATCAAGACATATCTGAACACCCAGTTGAGGATACTGCTCCGAAATCTGTTTTTTCATGCACTGTATGTAATAGGAAATTCAAATTAAAATCTCGAATTGAGTTTCATATGAAATTTCATAGGGGCGAAGAACCAGGATACTGTTCGTTGTGTGATAAGAGATTTGCTGATGAAAATCTTCTATTCAAACATGTCTGGTATCTTCACAATGGAGGTGCTGAGAGAAGGCTCTCAAAAAACAATCCAAAATCTCAAAATAAATCTGTCAGTGGAGGTGAAAATTGTCTGGAGTGTGGCATGTTCTTCAGTCGCAAAACTGGGAGACTTGCTCATGAGGAAACAAAGCATGGTATCACTCGCCAGTGTTACAGCTGTTTCTATTGTATGGAAGCTTTTGCAACTATTGAGCAGATAGACAAACACACGGAATCTGAACATACAACTATTCGCATTGATGAAACGAACCGAAAATTTACTCAAATCAATAGACTATTCCAGTGTGAATACTGTTTTAGACTGTATACCAAACCATCTGCTCTTCATGCTCACAGGACTTTGAAACACAGTAAGGATCCAATGTTTACTTGCCGCTATTGTTCTGTAGAATTAGCCACCCACAAAGATCTACTATGTCACATTGCTTGGAGTATTCAGGATTCTGTGTCGCATAATAAAGAAGATTATCCTCCAAGGCCTGTTGCTAGAAAAGTTTTTCACTGTTATTTGTGCTCCAGAATGTCCAATCAGAAGAATTCTATGCAACACAGTTGCCTTCATTGCCTGAAAGTATTTTCCACAGAAGCAGCCCTTACTAAACATATTAGGATACACACAGgtgaacgaccttttgtgtgcgatgtttgtggaaaatgtttcagccaatcgtcaggactcaccacccactcgaaagtgcacacaaacgagaggccttataattgtgatcactgcCCTCGCACGTTTAAGATAAAGGGTGACCGTGATGTACACCAGCGTAAACATTCAGGAGATCGTCCATTCAAGTGTACAACCTGTGAAAAAACATTCATGACTCAGAAAGTGTACAGTCAACATTGTAAAATACATACCGATCATAGACCGTATGTCTGTAAAATATGTAAAGCCAGCTTCCGACGTTCGCATGTCTTGACAGTACATAAACTCCGTCACTCTGGTGAGAAGCCCCATCAATGTGAATTGTGTGACAAACAATATCGTCAGCGCAGTGATGTTCTTAAACATATGAAAGTGCAGCACGGAGTTACCAGCGCTATGTTGAATAATAAAAAAAATATCACCTAA
- Protein Sequence
- MQVDNSNKRCAVLKCVNAENPSTDTIFFPFPKDSERCLQWLLMCNRRDIIPNSVEKINKEYNICSLHFAKNNFVKNHKKLLTASAVPTNFIKEGNTSSIIEIDQNLNNDCDGSISVLLQDDNNFVTASSNETYYIQEISDMTPSKSVSILVEEARAKSVICRLCSESYSDTDNMFEIFGESNICEKINLCLPICVLPSDALPKTICKECFECLEKHLKFHQAVLESEDVLKQMFDGFLGSNMPMIQNIPQEEYDNDSNHKNFANSVHNDHLYAEISSEANENIEEVNVPDNDCDILSTDIPNMTTVYDQNVTVETLETIHDSLINCEDNISDVEVINIVNNDNNQYEENSRIIFDSSTPMYMCNLCNGIAPDLVSLFSHSIVTHLTSDDKYPCVLCDSLTFTTEDELIQHMNLHQYQHTSNTDDTETNLIDKRTLELDSCDIFEMSFNNQDISEHPVEDTAPKSVFSCTVCNRKFKLKSRIEFHMKFHRGEEPGYCSLCDKRFADENLLFKHVWYLHNGGAERRLSKNNPKSQNKSVSGGENCLECGMFFSRKTGRLAHEETKHGITRQCYSCFYCMEAFATIEQIDKHTESEHTTIRIDETNRKFTQINRLFQCEYCFRLYTKPSALHAHRTLKHSKDPMFTCRYCSVELATHKDLLCHIAWSIQDSVSHNKEDYPPRPVARKVFHCYLCSRMSNQKNSMQHSCLHCLKVFSTEAALTKHIRIHTGERPFVCDVCGKCFSQSSGLTTHSKVHTNERPYNCDHCPRTFKIKGDRDVHQRKHSGDRPFKCTTCEKTFMTQKVYSQHCKIHTDHRPYVCKICKASFRRSHVLTVHKLRHSGEKPHQCELCDKQYRQRSDVLKHMKVQHGVTSAMLNNKKNIT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00800246; iTF_00799596; iTF_00799331;
- 90% Identity
- iTF_00800246;
- 80% Identity
- iTF_00800246;