Hano007240.1
Basic Information
- Insect
- Himalopsyche anomala
- Gene Symbol
- ZNF212
- Assembly
- GCA_031772345.1
- Location
- CM062827.1:8768928-8783468[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 14 0.022 1 10.2 0.3 1 23 427 450 427 450 0.97 2 14 0.098 4.7 8.1 3.7 1 23 505 527 505 527 0.89 3 14 0.0085 0.4 11.5 0.3 2 19 534 551 534 552 0.94 4 14 0.019 0.91 10.4 0.2 3 21 582 600 581 603 0.86 5 14 0.036 1.7 9.5 0.2 1 23 610 633 610 633 0.97 6 14 0.002 0.093 13.5 2.2 1 23 652 675 652 675 0.94 7 14 1.2 56 4.7 0.8 1 19 681 699 681 701 0.88 8 14 9 4.3e+02 2.0 0.9 1 23 725 747 725 747 0.88 9 14 0.00016 0.0075 16.9 2.1 1 23 763 785 763 785 0.98 10 14 2.3e-07 1.1e-05 25.9 0.4 1 23 791 813 791 813 0.98 11 14 0.0055 0.26 12.1 3.0 1 23 819 841 819 841 0.98 12 14 0.63 30 5.6 4.8 1 23 847 869 847 869 0.90 13 14 8.1e-05 0.0038 17.8 2.1 1 23 875 897 875 897 0.98 14 14 6.2e-05 0.0029 18.2 2.3 1 23 903 926 903 926 0.97
Sequence Information
- Coding Sequence
- ATGGTGATCCTTATTCAAATGCATTTGGAATCACAAACAGAATCTTTTGCTTGTTATTACCCAACAAATGAAGATCCCAGCCATGATGAGATGTGGACAATGGATCTGTTTACAgCTGGCAATCCAATTAAGAAATGTGCTGTACTGAAATGTGTCAATGCAGGCAATCCCTCTGCAGATACTATATTCTTTCCATTTCCTAAAGATTCTGAAAGatgCCTTCAATGGCTGACGATGTGTAATAGAAGAGACATAATACCGAACTCAGtggagaaaataaataaagaatataatgtTTGTTCTTTACATTTTACGAAGAATAATTTTGTTAAGCATCATAAGAAACTTTTGACAGTCACAGCAGTACCTACAAATTTCACCCAGGAAGAAAACTTGTCGtcaataattgaaattgatCAAAGTTTAAATGATGATTGCAATGAAAGTATTTCTGTACTGCTTCAAgaagataataattttgtgGCTTCTACCTCAAATGAAACGTTTTACATACAAGAGATAAATGATATAACTACTTCAAAATCGATTAACGTTGTAGTAGAGGAAGCTAAAAGTAATTCTGCTATTTGTAGACTCTGTTCACAGAGTTATTCCGATGTAGATAACATGTTCGAAATTTTCAGTGAATCTAATATCTCTGAAAAAATTAATGTATGCTTACCTATATGCGTCTTGCCAACTGACGCATTGCCGAAAACTATTTGCAAGGAATGCTTcaaatgtttacaaaaacatttgaaatttcatcaagcagTTCTCGAGTCAGATGATGTTCTTAAGCAAATGTTTGATGGGTTTTTAGAATCAAATATTCCTATGATACAAATAATTCCACAAGAAGAATATGATAATGACAGTAATCATAAAAGTGTTTCCATTAGTGTTCACAATGATCATTTATATGCTGAAATTTCATCAGAGACGTATGAAAATACAGAAGAAGTCGATGTTCCTGATGacgattgtaatattttatcaactgatatttCTAATCTAACAACTGTTTATGATCAAAACGTTATAGTTGAAACGTTGGAAACCTTTAATGACTCATTGAACAATTGCGAGGATAATAAATCTGAAGTCGAAATCGTCAACATTATCAACaatgataataatgaatatgaTGAAAATAGCAGGATTGTTTTTGACAGCTCAACACCTATGTACATGTGTAACTTGTGCAATGGGATTGCGCCTGACTTAGTATCGCTTTTTAGTCATTCAATTGTAACTCACTCGACTTCTGATGATAAATATACCTGCGTCTTATGTGACTCATTGAATTTTACCAGCGAAGATGAATTATTCCAGCACATGAATCTTCATCAATATCAACCGACTGATGTCTCAAACACTGACGCCATTGAATCAAACCCTATTGATAAACGGACTTTAGATTTAGGGTCTTGCGACGTTTTGGAAATGTCATTTAATCATCAAGACATATCTGAACAACCAGTTGAAGAAACACTTGTaccaaaatctttttttacatgcaccatatgcaataaaaaattcaaattaaaatcccGAATTGAGTTTCATATGAAATTTCACCGGGGTGAAGAAGCTGGATACTGTTCACTGTGCGATAAGAGGTTtccggatgaaaatcttttatttaaacatgtCTGGTATCTTCACAATGGAGGTGCAGAAAAAAGGCTatcaaaaaacaatcaaaaatcacaaaataaattgacCAGTGGGGGAGAAAATTGTCCGGAGTGTGGTATGTTCTTCAGTCGCAAAACGGCGAGATTAGCCCATGAAGAAGCAAAACATGGCATGACTCGCCAATGCTACAGCTGTTTCTATTGCTTGGAAGCTTTTGCAACAACAGAACAgATCGATAAACACATGGAATCGGAACACACATCCATTCACATTGATGAAACTAATCTGAGAGTGACTCCTATCAATCGACTCTACCAGTGTGAATACTGCTTTAGACTATTCACCAAACCATCGGCTCTTCATGCTcacagGACTTTGCAACATAATAAGGATCCAATGTTCACATGCCGTTATTGTTCTGCAGAATTTGCCACTCACGGAGACCTACTATGTCATATCGCTTGGAGTCCTCAGGATTCTGTGTCTCATAATAAAGATGATTATCCCCAGAGGCCAGTTGCTAGAAAAGTCTTCCATTGTTATTTGTGCTCCAGAATGTTTCAAGCACTCCTTCCGATGATAAATCACATGGAGAGCCATAAAAATGACATGGAGGATaATCCCGAGCAAAAGTCTGTTTCGCAGCATACTTGTCTTCATTGCCTGAAACCATTTTCAACTGAAGCGTCCCTTATCAAACATGTTAGGGTACACACAGgtGAACGCCCTTATGTGTGTGACATTTGTGGGAAATCTTTCAGCCAATCTTCAGGGCTCACCACCCACTCGAAGGTACACACAAACGAGAGACCTTATAATTGTGATCACTGCTCTCGCACCTTTAAGATAAAGGGCGACCGTGATGTACATCAGCGCACACACTCAGGAAATCGTCCCTTCAAATGCTCGAcatgtgaaaaaacatttatgacCCAGCAGGTGTACAGTCAACACtgcaaaatacatacaaatcatAGACCTTATGTTTGCAAAATATGTAAAGCAAGCTTCCGCCGCTCCCATGTCTTGACAGTTCATCAGCTCCGGCATTCCGGTGAGAAACCCCATCAATGTGAACTGTGTGACAAACAATACCGTCAGCGTAGTGATGTTCTCAAACATATGAAAGTGCAGCATGGAATTACCAGTGctatgttgaataataaaaaaaataccacataa
- Protein Sequence
- MVILIQMHLESQTESFACYYPTNEDPSHDEMWTMDLFTAGNPIKKCAVLKCVNAGNPSADTIFFPFPKDSERCLQWLTMCNRRDIIPNSVEKINKEYNVCSLHFTKNNFVKHHKKLLTVTAVPTNFTQEENLSSIIEIDQSLNDDCNESISVLLQEDNNFVASTSNETFYIQEINDITTSKSINVVVEEAKSNSAICRLCSQSYSDVDNMFEIFSESNISEKINVCLPICVLPTDALPKTICKECFKCLQKHLKFHQAVLESDDVLKQMFDGFLESNIPMIQIIPQEEYDNDSNHKSVSISVHNDHLYAEISSETYENTEEVDVPDDDCNILSTDISNLTTVYDQNVIVETLETFNDSLNNCEDNKSEVEIVNIINNDNNEYDENSRIVFDSSTPMYMCNLCNGIAPDLVSLFSHSIVTHSTSDDKYTCVLCDSLNFTSEDELFQHMNLHQYQPTDVSNTDAIESNPIDKRTLDLGSCDVLEMSFNHQDISEQPVEETLVPKSFFTCTICNKKFKLKSRIEFHMKFHRGEEAGYCSLCDKRFPDENLLFKHVWYLHNGGAEKRLSKNNQKSQNKLTSGGENCPECGMFFSRKTARLAHEEAKHGMTRQCYSCFYCLEAFATTEQIDKHMESEHTSIHIDETNLRVTPINRLYQCEYCFRLFTKPSALHAHRTLQHNKDPMFTCRYCSAEFATHGDLLCHIAWSPQDSVSHNKDDYPQRPVARKVFHCYLCSRMFQALLPMINHMESHKNDMEDNPEQKSVSQHTCLHCLKPFSTEASLIKHVRVHTGERPYVCDICGKSFSQSSGLTTHSKVHTNERPYNCDHCSRTFKIKGDRDVHQRTHSGNRPFKCSTCEKTFMTQQVYSQHCKIHTNHRPYVCKICKASFRRSHVLTVHQLRHSGEKPHQCELCDKQYRQRSDVLKHMKVQHGITSAMLNNKKNTT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00800505;
- 90% Identity
- iTF_00799331;
- 80% Identity
- iTF_00799331;