Hjap009713.1
Basic Information
- Insect
- Himalopsyche japonica
- Gene Symbol
- lrrfip2
- Assembly
- GCA_028555115.1
- Location
- JAHFWJ010000357.1:400909-414472[-]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.6e-96 3.8e-92 309.2 27.7 1 300 219 523 219 523 0.90 2 2 0.019 4.6e+02 0.3 4.4 122 171 523 572 521 578 0.90
Sequence Information
- Coding Sequence
- ATGGCGGACGTCGACGCCCATTCATCGTCCGATTTGGACCCAGCGGACAGTTCGGGCGGCGAATTCACCTCTGGTGATTTCGAACAAGCGTCGGACGATGGCGACGCCGTTTTCTGCTCTGCAGAGGAAACCTTAAAAGACGTTCCGTGTAACGAAGTTATAAACGCCGACGTAAAGACTTCGCTCGACGAAGATGTGCAGCTGAGGCACGAAAAGGCCACGTCGACGATAGGATCGTATTCGTCGTTGAATGGCGAAGACGATCTTTTTAATGGGAGCAACATTTCTAACGGGAACGATGACATCAGCATCGTTGGAATCCTCGGGAAAGATTATGACATAATATGGCCTTATATTTTACTTATGGTTGCAGTATGGCACTGTTGCCTTGTCTTGACAATAATCTCATTCGCTATTGCACTGCGGTTGCACAAATTCGACAGGAATACGCCTCTCGACTATTGTAAATTCTATCGCATCCACCTGTTCTCAGAGATGCATCCATCTATCGAAATAGTGTATATCGCTTTTAAAGCAGCAAGCCGGCATCTCGGAGGTGCTCGCCCCCCGTACTGTGACATACCGTTACAGTCTGTTAACGATGTCAGCCACAATATCAAGTTCCGCAGTGCGAAACACGCCACATCGCGTAAAGCGGAAGCTCGCTTGGCGGCAAGGCGACAGGCGAGGGCGGAAGCCAGAGACATTCGCATGCGGGAGCTTGAACGACAGCAGAAAGAACAGGAGGAAAATGCAGACCGTGCCTACTATATGCAGTCAGAGCCATTACAAAGGAGCGGCCGTGTGTCTGGAAGCGGTCCAGCTGCGATTGCTCGCCTTTCATCTACCACTTCGGCCTCCGGCACACCCAATGCTCATTCCTCCCGTAGAAGTTCCCAAGATTCCGTTGAAGAATTGGGCAGCATTAGGGATATAAGGCATGAACTCAAAGAAGTGGAAGAGAAATTTCGAAAGGCAATGATACTAAATGCTCAGTTGGATAACGATAAGGCATCTTTCTCTTACCAACTGGAACTTTTAAAAGATAAATTGGAAGATCTACAGGAGCAATATACCCAATTGCAGCGTGAACACAAAGACAAGTGTCGATCTCATGAAGCACTAGTGCGAGAGTGTAGAGTTACAAAAGAAGAAGTGGAGAGATGTACTGCTGCAGTCGCTCTCCGCGATCGCTGCATCTTGGAAGCTGGCTTAGAATTAGTTGCCGTTCAATTGGCTGAAGGCGATACCGAAGGAGCAGGAGCCGCTCTCGTCTCCCGTGCCAGTAAAGAAGCTCTGGAAGCAGCTGGCCATGGGGCACTCGATGTTCGGTTGCAAACATTATGCTCCCAACGGCAAGCTCTGGAATCAGAAGTCAAGCAGTTGAAAATGCAACTTGACGAAGAAAGATCGAAGAAGAAAAACAACATACACAATAACTCTTCCCATAACGGACCCGTTAATGGTTCCGATAGTGACTCAGACTCTATGGAAAATCATAGAGAAAATTCAAAACTAGTTGCTGATTACAAATTCCGAGCATCCAAGGCTGAACAAGACGTGCTGACATTGCAGGCTACAGTCGCTCGATTAGAGAGTCAGGTGATTCGTTACAAGAGTGCCGTTGAAGAAGCTGAAAGAATGGAGGATGAACTTAAGTGTGATCGAAGAAAATTGCAGAGAGAGGCCCGTGAAGCACAAAGCCGAGTTGAGGAATTGGAAACTGAAAATAATCACTTGAATAAACGTCTGGATAAATTAAAAACTGCTAAATCAGCTCTACTGAAAGAACTTTGA
- Protein Sequence
- MADVDAHSSSDLDPADSSGGEFTSGDFEQASDDGDAVFCSAEETLKDVPCNEVINADVKTSLDEDVQLRHEKATSTIGSYSSLNGEDDLFNGSNISNGNDDISIVGILGKDYDIIWPYILLMVAVWHCCLVLTIISFAIALRLHKFDRNTPLDYCKFYRIHLFSEMHPSIEIVYIAFKAASRHLGGARPPYCDIPLQSVNDVSHNIKFRSAKHATSRKAEARLAARRQARAEARDIRMRELERQQKEQEENADRAYYMQSEPLQRSGRVSGSGPAAIARLSSTTSASGTPNAHSSRRSSQDSVEELGSIRDIRHELKEVEEKFRKAMILNAQLDNDKASFSYQLELLKDKLEDLQEQYTQLQREHKDKCRSHEALVRECRVTKEEVERCTAAVALRDRCILEAGLELVAVQLAEGDTEGAGAALVSRASKEALEAAGHGALDVRLQTLCSQRQALESEVKQLKMQLDEERSKKKNNIHNNSSHNGPVNGSDSDSDSMENHRENSKLVADYKFRASKAEQDVLTLQATVARLESQVIRYKSAVEEAERMEDELKCDRRKLQREAREAQSRVEELETENNHLNKRLDKLKTAKSALLKEL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -