Hano000675.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Himalopsyche anomala
Gene Symbol
sip1
Assembly
GCA_031772345.1
Location
CM062821.1:19598902-19608473[-]

Transcription Factor Domain

TF Family
GCFC
Domain
GCFC domain
PFAM
PF07842
TF Group
Unclassified Structure
Description
This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 2.5e-43 2.7e-39 135.7 7.5 5 274 367 620 363 621 0.94
2 2 0.75 8.1e+03 -3.6 0.0 249 260 640 651 631 663 0.65

Sequence Information

Coding Sequence
ATGTCGGAAGAAGAACTTGAAAGTTTTGAAATTACGGACTATGATctgaataatgaatttataagaACAAACAGACGTCCCACGAAAGAGCAACAAATATACGgtgTTTGGGCAGACAGTGATGAAGAAGATGAAAGAAAGACTACCAGAAGAAAAGGAAGGGTTCGCAAAGAAAAAGACTATACTGTACCGATTGGATTTATTTCTGGTGGAATTCAACAATCTGCCAAAGAGAAAGAAGAAAAGGAAAATGACGAGTCTACTCGTGAAGATCCAATACAAGTCGGTAGTTCATCAGATGAAGAAACCGTGGAAGTACCTGATGAAAATCTCACTGCTGGATTACGGAGACGAGGAATGACTGGACCGAAGGCTATGTCAAATGTTGGCGGAGTGGGGAATTGGGAAAAACATACTAAGGGAATTGGGGCTAAGCTTCTACTTCAGatggGTTATCAACCAGGAAGAGGCTTGGGAAAAGCTTTGCAGGGAATATCAGCTCCTGTCACTGCCACTCTTAGAAAAGGCCGTGGTGCGATTGGAGCTTACGGTCCAGAGgttaagataaaaaaagatatggaaATTGCGATGGGAGTTAAACAAAATCAAGCTAAAGAAGAGGATGAAAAATCTTATCAGTGGAAGAAGCAGCAGAAGCAGAGGTATTTCTACCGCGATGCTGAGGATGTGATACAAGAAGGAAAACCAGTTACATCAGCACACACACAGCAAACAGCTGCCTTGGCAAGAGTACCTGTAATAGATTTAAGAGGTCCAGAGAAACGTGTCCTTAGTGGATATCACGCTTTAAGGGCAGCTGCGCCACGGTATGAGGACGTTCCACGGAGAGAATGTCCTCACCTCGCTCTTCCAGAACTCCTCCACAATCTCAATCTACTTGTCGATATGTGTGAACAAGACATAATAGAGTGTTCTAGGGATGGCCAAATGGCAGAAGATCGACAAGTTGTTCTTGAACGTGACAAGAAGGCACTCGAAGAAACAATCCGTAATGAAGATGGCCAGATCTCAGCGATGCAAAATATTCTCACTCAAGTAGAGAAACTCAACACTACCAATTTGACTTTGAGTGAGGCCTTTGCCATCTATAGCCATTTACAGgtaTCATATCCGATAGAATATAGTTGTCTGGGTCTGGGAGCATTTGCAGCATCGAGCAGTGTCTTAAGTTTTCCTATGCTGACAACTTTTGCACTTTGGAAACCCTTGACTGCTCCCCAGGAACCTCTACCCGTTCTCAATCAATGGTCAACACTGCTCACTGCGCAAACACTGCAAGAACTGTTTTGGCAGCCGTGGCTTGAGTGTGTCAAATCAGCGGCGATAGAATGGGAAGTACGCATTCCAGCACCTATGAGAGAATTGATGCAAGTGTGGTCTGGAATAGCGCCATCACGTGAGACCCGGGCTGTACTTCGAGAAGCTATTGTGCCGAGGTTAGCAGCAGCTGCTTCTTGTTGGGACCCCACTGTAGACACAATGCCTTTGCATTATTGGATTCTTCCGTGGCACGAATATGCAGCTGATCTACTCGAAGAATCTGTGTATCCTGAATTGCGATCTCGGTTAGTAGCAGCATTGTCCGCTTGGCATCCAGCTGACGGATCAGCTCTGGCATTATTGAGGCCGTGGTCAAGCGCGTGGGCTCTAGCAATGCCTTTGTTGACACGCTCCCATATCTTACCTCGGCTTGAAAATTGCATGAGAGTTATGCTCGTTGAGCCTGACTGTGATCCAAGTGaaaCATGGAGTTGGTGTTCGTGCTGGCAAGAGTTAGTGGGGGCTCGCGCGCTTGCTGGATCTGCAGGCAGAGCCCTGCTTCCGCGGTGGCTTGCATCTCTCGCTGCGTGGCTTAACCGAAGACCTCCACACGCACTTCTCATTGCTCACTACAGCAAGTGGAAGAGTATGTTTTCAGAAGAGCTTTTAAAAGAACCAGAATTTGCAGACACCTTTCGTAAAGCATTGGATATGATGAACAGATCGATGGACTCTCCCATTGTTCCTCCGCCGCCTCCTCCTCCCAGGCCTGTCCCGCCTGCCACAATTCAAACCGTGGCACAAATCAACTCTAATCAACAGAAAAGCTTTACAGAACTTGTACAAAGCCGGTGCAATGAACGAGGTATCGGACTCGTACCGATCATTGGTCGGAGCAAAGATGGAAGACCAGTTTATAAGATAGGATCTATTCTTCAATGTTATATTATCCGAAATGTTGTGATGTATTCCTCTGATATGGGAAGAAATTTCCAACCTATTTCTCTGGATGTCTTATTACAAATGGCTAGCACttaa
Protein Sequence
MSEEELESFEITDYDLNNEFIRTNRRPTKEQQIYGVWADSDEEDERKTTRRKGRVRKEKDYTVPIGFISGGIQQSAKEKEEKENDESTREDPIQVGSSSDEETVEVPDENLTAGLRRRGMTGPKAMSNVGGVGNWEKHTKGIGAKLLLQMGYQPGRGLGKALQGISAPVTATLRKGRGAIGAYGPEVKIKKDMEIAMGVKQNQAKEEDEKSYQWKKQQKQRYFYRDAEDVIQEGKPVTSAHTQQTAALARVPVIDLRGPEKRVLSGYHALRAAAPRYEDVPRRECPHLALPELLHNLNLLVDMCEQDIIECSRDGQMAEDRQVVLERDKKALEETIRNEDGQISAMQNILTQVEKLNTTNLTLSEAFAIYSHLQVSYPIEYSCLGLGAFAASSSVLSFPMLTTFALWKPLTAPQEPLPVLNQWSTLLTAQTLQELFWQPWLECVKSAAIEWEVRIPAPMRELMQVWSGIAPSRETRAVLREAIVPRLAAAASCWDPTVDTMPLHYWILPWHEYAADLLEESVYPELRSRLVAALSAWHPADGSALALLRPWSSAWALAMPLLTRSHILPRLENCMRVMLVEPDCDPSETWSWCSCWQELVGARALAGSAGRALLPRWLASLAAWLNRRPPHALLIAHYSKWKSMFSEELLKEPEFADTFRKALDMMNRSMDSPIVPPPPPPPRPVPPATIQTVAQINSNQQKSFTELVQSRCNERGIGLVPIIGRSKDGRPVYKIGSILQCYIIRNVVMYSSDMGRNFQPISLDVLLQMAST

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00800190;
90% Identity
iTF_00800190;
80% Identity
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