Hrot013783.1
Basic Information
- Insect
- Heteromyza rotundicornis
- Gene Symbol
- -
- Assembly
- GCA_951394025.1
- Location
- OX596011.1:81210587-81212158[-]
Transcription Factor Domain
- TF Family
- RHD
- Domain
- RHD domain
- PFAM
- PF00554
- TF Group
- Beta-Scaffold Factors
- Description
- Proteins containing the Rel homology domain (RHD) are eukaryotic transcription factors. The RHD is composed of two structural domains. This is the N-terminal DNA-binding domain that is similar to that found in P53. The C-terminal domain has an immunoglobulin-like fold (See PF16179) that functions as a dimerisation domain [1-2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.3e-09 1.1e-05 26.0 0.0 1 165 5 172 5 175 0.75 2 2 0.057 1.9e+02 2.5 0.0 36 87 238 290 231 298 0.76
Sequence Information
- Coding Sequence
- ATGAATCCGTTACTCTCCATTACGGAACAACCAATGCCGACATTCAAATCATGTTACCGTTCCGACATGAAAAAATCTTCCAATGCAATCAGTGGCATCAACTCAAAGGGAAAGAGGAAAACTTATCCCACGGTAAAACTAAACGATGCACCCTTTGGATTATATCTAATGCTGTGTTCACTGTGCGAGTCAGATACCAAGCAATTGTCGCCCAGTTTGCTACTACCAGAAACGGAGTATAACCACAAACCCCTTATCGCAGAGATGAAGCAATCGGGCGAACGGGAGTTTGaattcgaaatgaaaaactatTTCATCAAATTGACCAAGAAAGACGAAACAAATATACTGAAATCGAAATACGAACAATTAGAGAATCTCAGGTCAGGAACAACTGCATTAAATAACACGCAAAAGGAACACATTGCAAATGTAGTCTACAGTCAACTGCAGAAGCCACGCAATGATAGCGATGGAAGTCTTCAGCAGGTTGCTGGGCCCATTTATTCCGAACCCTTTCGTTATGCGAACTCGAGTAAAACTAAAATATCGAAAGACCCCATTTGCCGCAGCGTAGACGGCAAGGTGGTCACAGGCCCAATGCCAAAATATGATCAGgatttgttgaaaaataaagaaaatgaaTTTCCTTGCTTCGTCGATGTAGTGGATGCCACAACTGAAGCTAGGATATGCAGTAATGCAGTAAGGAACACCTATGAGAACGCTGAAGAGTGTTCAAGTGCAAAAAGAAGAAAGTTGACAGAGTCAATGGTCAATCTACAACAATCGAACGAATCGCACGAGGTCTGGCTTTCCAGTCGGGAATGCCCTGAGGAAGCCAAGCTGGAATTGGCTGTGAATCCATCCATGAGCTATTGTCTGTTGGAGGAACAGAACCCAGAGCTCTTCACGGCCTCACCGGACTATGATAACACAGACTCGATAGCAACCACAGCAACAGTATCAGCCACCACAActgcaataacaataacaacaacagcacaagTGGCAGTATCTACAACGCCAGGCAaaagttgtttccaaaatGTACCTGATATCTCATCGACCATGTTCCCTCCAGTGGTGACGTCTCCATCCATCAATTCTCAACAACCGATTAGAGATGACACACACGAATCGAATGAAATTCGTGACCAATTGGACACTTTTATTAGTGAagaattggaaaatttggaattgGACGACATAAACCCAGATTTATTGCTGGAAGAAACTATGGACGGCAAAAACCCACATTTACTACTTGAAGAAACTGTGATCGACTTTGATTTAGATTTATTAGACTGGTTTAAGttctaa
- Protein Sequence
- MNPLLSITEQPMPTFKSCYRSDMKKSSNAISGINSKGKRKTYPTVKLNDAPFGLYLMLCSLCESDTKQLSPSLLLPETEYNHKPLIAEMKQSGEREFEFEMKNYFIKLTKKDETNILKSKYEQLENLRSGTTALNNTQKEHIANVVYSQLQKPRNDSDGSLQQVAGPIYSEPFRYANSSKTKISKDPICRSVDGKVVTGPMPKYDQDLLKNKENEFPCFVDVVDATTEARICSNAVRNTYENAEECSSAKRRKLTESMVNLQQSNESHEVWLSSRECPEEAKLELAVNPSMSYCLLEEQNPELFTASPDYDNTDSIATTATVSATTTAITITTTAQVAVSTTPGKSCFQNVPDISSTMFPPVVTSPSINSQQPIRDDTHESNEIRDQLDTFISEELENLELDDINPDLLLEETMDGKNPHLLLEETVIDFDLDLLDWFKF
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -